RNA–Protein interactions for RNA: ENSMUST00000022115.13

Xrcc4-201, Transcript of DNA repair protein XRCC4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Xrcc4, Length 1,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc4-201ENSMUST00000022115 Mapk8ip2Q9ERE9 830 aa18.7■□□□□ 0.58
Xrcc4-201ENSMUST00000022115 Chic1Q8CBW7 227 aa18.55■□□□□ 0.56
Xrcc4-201ENSMUST00000022115 Phf23Q8BSN5 401 aa16.54■□□□□ 0.24
Xrcc4-201ENSMUST00000022115 Gab3Q8BSM5 595 aa15.68■□□□□ 0.1
Xrcc4-201ENSMUST00000022115 Plppr3Q7TPB0 716 aa15.48■□□□□ 0.07
Xrcc4-201ENSMUST00000022115 Senp3Q9EP97 568 aaKnown RBP14.92□□□□□ -0.02
Xrcc4-201ENSMUST00000022115 GapdhsQ64467 440 aa14.87□□□□□ -0.03
Xrcc4-201ENSMUST00000022115 NischQ80TM9 1593 aa14.63□□□□□ -0.07
Xrcc4-201ENSMUST00000022115 Gm35339A0A140LHH9 1649 aa14.6□□□□□ -0.07
Xrcc4-201ENSMUST00000022115 Fam163aQ8CAA5 168 aa14.3□□□□□ -0.12
Xrcc4-201ENSMUST00000022115 Abcc9P70170 1546 aa14.19□□□□□ -0.14
Xrcc4-201ENSMUST00000022115 Abcc8B2RUS7 1588 aa14.04□□□□□ -0.16
Xrcc4-201ENSMUST00000022115 Kcna4Q61423 654 aa13.62□□□□□ -0.23
Xrcc4-201ENSMUST00000022115 Hoxd11P23813 323 aa13.43□□□□□ -0.26
Xrcc4-201ENSMUST00000022115 ScribQ80U72 1612 aa13.23□□□□□ -0.29
Xrcc4-201ENSMUST00000022115 Trap1aP19473 224 aa13.19□□□□□ -0.3
Xrcc4-201ENSMUST00000022115 Dcaf1Q80TR8 1506 aa13.09□□□□□ -0.31
Xrcc4-201ENSMUST00000022115 Rhox8Q6VSS7 320 aa13.05□□□□□ -0.32
Xrcc4-201ENSMUST00000022115 Znf219Q6IQX8 726 aa13.03□□□□□ -0.32
Xrcc4-201ENSMUST00000022115 ArsiQ32KI9 573 aa12.94□□□□□ -0.34
Xrcc4-201ENSMUST00000022115 NacadQ5SWP3 1504 aa12.94□□□□□ -0.34
Xrcc4-201ENSMUST00000022115 Kdm5dQ62240 1548 aa12.92□□□□□ -0.34
Xrcc4-201ENSMUST00000022115 Rb1cc1Q9ESK9 1588 aa12.74□□□□□ -0.37
Xrcc4-201ENSMUST00000022115 Slc34a2Q9DBP0 697 aa12.71□□□□□ -0.38
Xrcc4-201ENSMUST00000022115 Ccdc180J3QNE4 1664 aa12.68□□□□□ -0.38
Xrcc4-201ENSMUST00000022115 Sycp2Q9CUU3 1500 aa12.67□□□□□ -0.38
Xrcc4-201ENSMUST00000022115 Baz1aO88379 1555 aa12.63□□□□□ -0.39
Xrcc4-201ENSMUST00000022115 Crybg2B7ZCC2 1516 aa12.61□□□□□ -0.39
Xrcc4-201ENSMUST00000022115 Chrna2Q91X60 512 aa12.59□□□□□ -0.39
Xrcc4-201ENSMUST00000022115 Rsph4aQ8BYM7 716 aa12.53□□□□□ -0.4
Xrcc4-201ENSMUST00000022115 Dnajc5bQ9CQ94 199 aa12.52□□□□□ -0.41
Xrcc4-201ENSMUST00000022115 Rtl1Q7M732 1744 aa12.5□□□□□ -0.41
Xrcc4-201ENSMUST00000022115 BicraF8VPZ9 1578 aa12.39□□□□□ -0.43
Xrcc4-201ENSMUST00000022115 Zcchc6Q5BLK4 1491 aaKnown RBP12.37□□□□□ -0.43
Xrcc4-201ENSMUST00000022115 Rimbp2Q80U40 1072 aa12.37□□□□□ -0.43
Xrcc4-201ENSMUST00000022115 Akt1s1Q9D1F4 257 aa12.36□□□□□ -0.43
Xrcc4-201ENSMUST00000022115 Smarca2Q6DIC0 1577 aa12.3□□□□□ -0.44
Xrcc4-201ENSMUST00000022115 Ccdc136Q3TVA9 1136 aa12.16□□□□□ -0.46
Xrcc4-201ENSMUST00000022115 Dmrt2Q8BG36 561 aa12.14□□□□□ -0.47
Xrcc4-201ENSMUST00000022115 Cecr2E9Q2Z1 1453 aa12.11□□□□□ -0.47
Xrcc4-201ENSMUST00000022115 Trim41Q5NCC3 630 aa12.06□□□□□ -0.48
Xrcc4-201ENSMUST00000022115 Brd4Q9ESU6 1400 aaKnown RBP12.03□□□□□ -0.48
Xrcc4-201ENSMUST00000022115 Pds5bQ4VA53 1446 aaKnown RBP12.01□□□□□ -0.49
Xrcc4-201ENSMUST00000022115 Smarca4Q3TKT4 1613 aaKnown RBP11.99□□□□□ -0.49
Xrcc4-201ENSMUST00000022115 Atad2bE9Q166 1460 aaKnown RBP11.98□□□□□ -0.49
Xrcc4-201ENSMUST00000022115 CftrP26361 1476 aa11.93□□□□□ -0.5
Xrcc4-201ENSMUST00000022115 Synj1Q8CHC4 1574 aa11.9□□□□□ -0.5
Xrcc4-201ENSMUST00000022115 Iqgap2Q3UQ44 1575 aa11.86□□□□□ -0.51
Xrcc4-201ENSMUST00000022115 Cttnbp2B9EJA2 1648 aa11.84□□□□□ -0.51
Xrcc4-201ENSMUST00000022115 HrcG5E8J6 738 aa11.81□□□□□ -0.52
Xrcc4-201ENSMUST00000022115 Esf1Q3V1V3 845 aaKnown RBP11.75□□□□□ -0.53
Xrcc4-201ENSMUST00000022115 Golga3P55937 1487 aa11.74□□□□□ -0.53
Xrcc4-201ENSMUST00000022115 Atf5O70191 283 aa11.73□□□□□ -0.53
Xrcc4-201ENSMUST00000022115 Frmpd1A2AKB4 1549 aa11.72□□□□□ -0.53
Xrcc4-201ENSMUST00000022115 Wdr62Q3U3T8 1523 aa11.71□□□□□ -0.54
Xrcc4-201ENSMUST00000022115 Ercc6F8VPZ5 1481 aa11.71□□□□□ -0.54
Xrcc4-201ENSMUST00000022115 Hs6st3Q9QYK4 470 aa11.7□□□□□ -0.54
Xrcc4-201ENSMUST00000022115 Thoc2B1AZI6 1594 aaKnown RBP11.68□□□□□ -0.54
Xrcc4-201ENSMUST00000022115 Cngb1E1AZ71 1325 aa11.66□□□□□ -0.54
Xrcc4-201ENSMUST00000022115 Ppp4r2Q0VGB7 417 aa11.63□□□□□ -0.55
Xrcc4-201ENSMUST00000022115 Ppargc1bQ8VHJ7 1014 aa11.63□□□□□ -0.55
Xrcc4-201ENSMUST00000022115 Top2bQ64511 1612 aa11.62□□□□□ -0.55
Xrcc4-201ENSMUST00000022115 Znf704Q9ERQ3 566 aa11.6□□□□□ -0.55
Xrcc4-201ENSMUST00000022115 Phldb1Q6PDH0 1371 aaKnown RBP11.59□□□□□ -0.55
Xrcc4-201ENSMUST00000022115 Slc4a5E9Q3M5 1116 aa11.56□□□□□ -0.56
Xrcc4-201ENSMUST00000022115 Rsf1E9PWW9 1441 aaKnown RBP11.55□□□□□ -0.56
Xrcc4-201ENSMUST00000022115 Sox12Q04890 314 aa11.53□□□□□ -0.56
Xrcc4-201ENSMUST00000022115 Cep164Q5DU05 1446 aa11.52□□□□□ -0.57
Xrcc4-201ENSMUST00000022115 Fmn1Q05860 1466 aa11.52□□□□□ -0.57
Xrcc4-201ENSMUST00000022115 Fam135aQ6NS59 1506 aa11.52□□□□□ -0.57
Xrcc4-201ENSMUST00000022115 Ccdc88bQ4QRL3 1481 aa11.51□□□□□ -0.57
Xrcc4-201ENSMUST00000022115 Cc2d2aQ8CFW7 1633 aa11.51□□□□□ -0.57
Xrcc4-201ENSMUST00000022115 Ubl4bQ9CQ84 188 aa11.47□□□□□ -0.57
Xrcc4-201ENSMUST00000022115 Unc13aQ4KUS2 1712 aa11.47□□□□□ -0.57
Xrcc4-201ENSMUST00000022115 Lamc3Q9R0B6 1581 aa11.47□□□□□ -0.57
Xrcc4-201ENSMUST00000022115 Bach1P97302 739 aa11.46□□□□□ -0.57
Xrcc4-201ENSMUST00000022115 Baz1bQ9Z277 1479 aa11.46□□□□□ -0.57
Xrcc4-201ENSMUST00000022115 TnnQ80Z71 1560 aa11.44□□□□□ -0.58
Xrcc4-201ENSMUST00000022115 Kif15Q6P9L6 1387 aa11.44□□□□□ -0.58
Xrcc4-201ENSMUST00000022115 Cacnb1Q8R3Z5 597 aa11.41□□□□□ -0.58
Xrcc4-201ENSMUST00000022115 Top2aQ01320 1528 aaKnown RBP11.36□□□□□ -0.59
Xrcc4-201ENSMUST00000022115 Slc4a1apE9PX68 744 aa11.35□□□□□ -0.59
Xrcc4-201ENSMUST00000022115 Cux2P70298 1426 aa11.34□□□□□ -0.59
Xrcc4-201ENSMUST00000022115 Ccdc18Q640L5 1455 aa11.3□□□□□ -0.6
Xrcc4-201ENSMUST00000022115 Npm1Q61937 292 aaKnown RBP11.29□□□□□ -0.6
Xrcc4-201ENSMUST00000022115 Camsap1A2AHC3 1581 aa11.28□□□□□ -0.6
Xrcc4-201ENSMUST00000022115 Mrc2Q64449 1479 aa11.27□□□□□ -0.61
Xrcc4-201ENSMUST00000022115 Il27Q8K3I6 234 aa11.25□□□□□ -0.61
Xrcc4-201ENSMUST00000022115 Rapgef2Q8CHG7 1496 aa11.22□□□□□ -0.61
Xrcc4-201ENSMUST00000022115 NrkQ9R0G8 1455 aa11.22□□□□□ -0.61
Xrcc4-201ENSMUST00000022115 LrpprcQ6PB66 1392 aaKnown RBP11.21□□□□□ -0.61
Xrcc4-201ENSMUST00000022115 Grin2bQ01097 1482 aa11.2□□□□□ -0.62
Xrcc4-201ENSMUST00000022115 Efcab5A0JP43 1406 aa11.16□□□□□ -0.62
Xrcc4-201ENSMUST00000022115 PogzQ8BZH4 1409 aaKnown RBP11.16□□□□□ -0.62
Xrcc4-201ENSMUST00000022115 PtprkP35822 1457 aa11.14□□□□□ -0.63
Xrcc4-201ENSMUST00000022115 Shroom4Q1W617 1475 aa11.14□□□□□ -0.63
Xrcc4-201ENSMUST00000022115 Dhx29Q6PGC1 1365 aaKnown RBP11.13□□□□□ -0.63
Xrcc4-201ENSMUST00000022115 Cep162Q6ZQ06 1403 aa11.13□□□□□ -0.63
Xrcc4-201ENSMUST00000022115 Npm2Q80W85 207 aa11.12□□□□□ -0.63
Xrcc4-201ENSMUST00000022115 Duox2A2AQ99 1517 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 93 ms