RNA–Protein interactions for RNA: ENSMUST00000020776.4

Ccdc117-201, Transcript of Coiled-coil domain-containing protein 117, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc117, Length 3,372 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc117-201ENSMUST00000020776 NischQ80TM9 1593 aa27.6■■■□□ 2.01
Ccdc117-201ENSMUST00000020776 Gm35339A0A140LHH9 1649 aa27.38■■□□□ 1.97
Ccdc117-201ENSMUST00000020776 Abcc9P70170 1546 aa26.97■■□□□ 1.91
Ccdc117-201ENSMUST00000020776 Abcc8B2RUS7 1588 aa26.22■■□□□ 1.79
Ccdc117-201ENSMUST00000020776 Rtl1Q7M732 1744 aa26.1■■□□□ 1.77
Ccdc117-201ENSMUST00000020776 Ccdc180J3QNE4 1664 aa25.56■■□□□ 1.68
Ccdc117-201ENSMUST00000020776 Rhox8Q6VSS7 320 aa25.23■■□□□ 1.63
Ccdc117-201ENSMUST00000020776 Zcchc6Q5BLK4 1491 aaKnown RBP25.13■■□□□ 1.61
Ccdc117-201ENSMUST00000020776 Dcaf1Q80TR8 1506 aa24.61■■□□□ 1.53
Ccdc117-201ENSMUST00000020776 Rpgrip1Q9EPQ2 1331 aa24.51■■□□□ 1.51
Ccdc117-201ENSMUST00000020776 ScribQ80U72 1612 aa24.38■■□□□ 1.49
Ccdc117-201ENSMUST00000020776 Rb1cc1Q9ESK9 1588 aa24.22■■□□□ 1.47
Ccdc117-201ENSMUST00000020776 Acin1Q9JIX8 1338 aaKnown RBP24.09■■□□□ 1.45
Ccdc117-201ENSMUST00000020776 HrcG5E8J6 738 aa24.07■■□□□ 1.44
Ccdc117-201ENSMUST00000020776 Baz1aO88379 1555 aa23.99■■□□□ 1.43
Ccdc117-201ENSMUST00000020776 Kdm5dQ62240 1548 aa23.84■■□□□ 1.41
Ccdc117-201ENSMUST00000020776 Smarca2Q6DIC0 1577 aa23.58■■□□□ 1.37
Ccdc117-201ENSMUST00000020776 Crybg2B7ZCC2 1516 aa23.55■■□□□ 1.36
Ccdc117-201ENSMUST00000020776 NacadQ5SWP3 1504 aa23.51■■□□□ 1.35
Ccdc117-201ENSMUST00000020776 Ccdc136Q3TVA9 1136 aa23.49■■□□□ 1.35
Ccdc117-201ENSMUST00000020776 Ehmt2Q9Z148 1263 aaKnown RBP23.43■■□□□ 1.34
Ccdc117-201ENSMUST00000020776 Cep164Q5DU05 1446 aa23.34■■□□□ 1.33
Ccdc117-201ENSMUST00000020776 Pcgf6Q99NA9 353 aa23.27■■□□□ 1.32
Ccdc117-201ENSMUST00000020776 Trim41Q5NCC3 630 aa23.23■■□□□ 1.31
Ccdc117-201ENSMUST00000020776 Sycp2Q9CUU3 1500 aa23.05■■□□□ 1.28
Ccdc117-201ENSMUST00000020776 Rsf1E9PWW9 1441 aaKnown RBP22.93■■□□□ 1.26
Ccdc117-201ENSMUST00000020776 Supt5hO55201 1082 aaKnown RBP22.76■■□□□ 1.23
Ccdc117-201ENSMUST00000020776 Cecr2E9Q2Z1 1453 aa22.76■■□□□ 1.23
Ccdc117-201ENSMUST00000020776 Ccdc88bQ4QRL3 1481 aa22.73■■□□□ 1.23
Ccdc117-201ENSMUST00000020776 Chic1Q8CBW7 227 aa22.73■■□□□ 1.23
Ccdc117-201ENSMUST00000020776 Synj1Q8CHC4 1574 aa22.71■■□□□ 1.23
Ccdc117-201ENSMUST00000020776 Brd4Q9ESU6 1400 aaKnown RBP22.7■■□□□ 1.23
Ccdc117-201ENSMUST00000020776 Top2bQ64511 1612 aa22.69■■□□□ 1.22
Ccdc117-201ENSMUST00000020776 Golga3P55937 1487 aa22.68■■□□□ 1.22
Ccdc117-201ENSMUST00000020776 BicraF8VPZ9 1578 aa22.63■■□□□ 1.21
Ccdc117-201ENSMUST00000020776 CftrP26361 1476 aa22.45■■□□□ 1.18
Ccdc117-201ENSMUST00000020776 Cttnbp2B9EJA2 1648 aa22.41■■□□□ 1.18
Ccdc117-201ENSMUST00000020776 Neurod1Q60867 357 aa22.37■■□□□ 1.17
Ccdc117-201ENSMUST00000020776 Cc2d2aQ8CFW7 1633 aa22.36■■□□□ 1.17
Ccdc117-201ENSMUST00000020776 Cngb1E1AZ71 1325 aa22.35■■□□□ 1.17
Ccdc117-201ENSMUST00000020776 Mier1Q5UAK0 511 aa22.34■■□□□ 1.17
Ccdc117-201ENSMUST00000020776 NefmP08553 848 aa22.32■■□□□ 1.16
Ccdc117-201ENSMUST00000020776 Gab3Q8BSM5 595 aa22.27■■□□□ 1.16
Ccdc117-201ENSMUST00000020776 Rapgef2Q8CHG7 1496 aa22.25■■□□□ 1.15
Ccdc117-201ENSMUST00000020776 Top2aQ01320 1528 aaKnown RBP22.17■■□□□ 1.14
Ccdc117-201ENSMUST00000020776 Sall2Q9QX96 1004 aa22.13■■□□□ 1.13
Ccdc117-201ENSMUST00000020776 Smarca4Q3TKT4 1613 aaKnown RBP22.12■■□□□ 1.13
Ccdc117-201ENSMUST00000020776 Eif4g1Q6NZJ6 1600 aaKnown RBP22.11■■□□□ 1.13
Ccdc117-201ENSMUST00000020776 Zeb1Q64318 1117 aa22.08■■□□□ 1.13
Ccdc117-201ENSMUST00000020776 Fmn1Q05860 1466 aa22.03■■□□□ 1.12
Ccdc117-201ENSMUST00000020776 Cep162Q6ZQ06 1403 aa21.92■■□□□ 1.1
Ccdc117-201ENSMUST00000020776 Anks4bQ8K3X6 423 aa21.86■■□□□ 1.09
Ccdc117-201ENSMUST00000020776 TnnQ80Z71 1560 aa21.84■■□□□ 1.09
Ccdc117-201ENSMUST00000020776 Aebp2Q9Z248 504 aaKnown RBP21.8■■□□□ 1.08
Ccdc117-201ENSMUST00000020776 Esf1Q3V1V3 845 aaKnown RBP21.77■■□□□ 1.08
Ccdc117-201ENSMUST00000020776 Iqgap2Q3UQ44 1575 aa21.76■■□□□ 1.07
Ccdc117-201ENSMUST00000020776 Ncapd3Q6ZQK0 1506 aa21.76■■□□□ 1.07
Ccdc117-201ENSMUST00000020776 Kdm5bQ80Y84 1544 aa21.67■■□□□ 1.06
Ccdc117-201ENSMUST00000020776 Las1lA2BE28 776 aaKnown RBP21.65■■□□□ 1.06
Ccdc117-201ENSMUST00000020776 UbtfP25976 765 aaKnown RBP21.65■■□□□ 1.06
Ccdc117-201ENSMUST00000020776 1700123L14RikQ3V2K7 440 aa21.65■■□□□ 1.06
Ccdc117-201ENSMUST00000020776 ClspnQ80YR7 1315 aa21.63■■□□□ 1.05
Ccdc117-201ENSMUST00000020776 Csrnp3P59055 597 aa21.56■■□□□ 1.04
Ccdc117-201ENSMUST00000020776 Arhgap35Q91YM2 1499 aa21.55■■□□□ 1.04
Ccdc117-201ENSMUST00000020776 NrkQ9R0G8 1455 aa21.53■■□□□ 1.04
Ccdc117-201ENSMUST00000020776 Arap1Q4LDD4 1452 aa21.46■■□□□ 1.03
Ccdc117-201ENSMUST00000020776 TchhA0A0B4J1F9 1599 aa21.46■■□□□ 1.03
Ccdc117-201ENSMUST00000020776 Clip1Q922J3 1391 aa21.45■■□□□ 1.02
Ccdc117-201ENSMUST00000020776 Atad2bE9Q166 1460 aaKnown RBP21.44■■□□□ 1.02
Ccdc117-201ENSMUST00000020776 PtprkP35822 1457 aa21.44■■□□□ 1.02
Ccdc117-201ENSMUST00000020776 Arhgef5E9Q7D5 1581 aa21.43■■□□□ 1.02
Ccdc117-201ENSMUST00000020776 Lamc3Q9R0B6 1581 aa21.41■■□□□ 1.02
Ccdc117-201ENSMUST00000020776 TonslQ6NZL6 1363 aa21.41■■□□□ 1.02
Ccdc117-201ENSMUST00000020776 Unc13aQ4KUS2 1712 aa21.4■■□□□ 1.02
Ccdc117-201ENSMUST00000020776 Cdk11bP24788 784 aaKnown RBP21.39■■□□□ 1.02
Ccdc117-201ENSMUST00000020776 Wdr66E9Q743 1299 aa21.38■■□□□ 1.01
Ccdc117-201ENSMUST00000020776 Nop58Q6DFW4 536 aaKnown RBP21.38■■□□□ 1.01
Ccdc117-201ENSMUST00000020776 Erich3F6QRE9 1637 aa21.37■■□□□ 1.01
Ccdc117-201ENSMUST00000020776 Aplp2Q06335 707 aa21.34■■□□□ 1.01
Ccdc117-201ENSMUST00000020776 Ccdc18Q640L5 1455 aa21.34■■□□□ 1.01
Ccdc117-201ENSMUST00000020776 Map3k1P53349 1493 aa21.32■■□□□ 1
Ccdc117-201ENSMUST00000020776 Camsap1A2AHC3 1581 aa21.32■■□□□ 1
Ccdc117-201ENSMUST00000020776 Myt1lP97500 1187 aa21.31■■□□□ 1
Ccdc117-201ENSMUST00000020776 Wdr62Q3U3T8 1523 aa21.3■■□□□ 1
Ccdc117-201ENSMUST00000020776 Tiam1Q60610 1591 aa21.29■■□□□ 1
Ccdc117-201ENSMUST00000020776 Plekhg3Q4VAC9 1341 aa21.29■■□□□ 1
Ccdc117-201ENSMUST00000020776 Frmpd1A2AKB4 1549 aa21.28■■□□□ 1
Ccdc117-201ENSMUST00000020776 Shroom4Q1W617 1475 aa21.27■■□□□ 1
Ccdc117-201ENSMUST00000020776 Eea1Q8BL66 1411 aa21.24■□□□□ 0.99
Ccdc117-201ENSMUST00000020776 Ankrd26Q811D2 1581 aa21.2■□□□□ 0.98
Ccdc117-201ENSMUST00000020776 Ppargc1bQ8VHJ7 1014 aa21.19■□□□□ 0.98
Ccdc117-201ENSMUST00000020776 Pds5bQ4VA53 1446 aaKnown RBP21.17■□□□□ 0.98
Ccdc117-201ENSMUST00000020776 Lmo7E9PYF4 1699 aaKnown RBP21.16■□□□□ 0.98
Ccdc117-201ENSMUST00000020776 Npm2Q80W85 207 aa21.16■□□□□ 0.98
Ccdc117-201ENSMUST00000020776 Slx4Q6P1D7 1565 aa21.12■□□□□ 0.97
Ccdc117-201ENSMUST00000020776 AqrQ8CFQ3 1481 aaKnown RBP21.12■□□□□ 0.97
Ccdc117-201ENSMUST00000020776 Naip1Q9QWK5 1403 aa21.11■□□□□ 0.97
Ccdc117-201ENSMUST00000020776 Mroh2bQ7M6Y6 1581 aa21.1■□□□□ 0.97
Ccdc117-201ENSMUST00000020776 Pcf11G3X9Z4 1553 aa21.09■□□□□ 0.97
Ccdc117-201ENSMUST00000020776 Baz1bQ9Z277 1479 aa21.08■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms