RNA–Protein interactions for RNA: ENSMUST00000020078.13

Lims1-202, Transcript of LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lims1, Length 4,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1-202ENSMUST00000020078 Rhox8Q6VSS7 320 aa23.42■■□□□ 1.34
Lims1-202ENSMUST00000020078 NischQ80TM9 1593 aa22.75■■□□□ 1.23
Lims1-202ENSMUST00000020078 Abcc9P70170 1546 aa21.61■■□□□ 1.05
Lims1-202ENSMUST00000020078 Ccdc136Q3TVA9 1136 aa21.31■■□□□ 1
Lims1-202ENSMUST00000020078 Abcc8B2RUS7 1588 aa21.22■□□□□ 0.99
Lims1-202ENSMUST00000020078 Gm35339A0A140LHH9 1649 aa21■□□□□ 0.95
Lims1-202ENSMUST00000020078 Ehmt2Q9Z148 1263 aaKnown RBP20.83■□□□□ 0.93
Lims1-202ENSMUST00000020078 Trim41Q5NCC3 630 aa20.72■□□□□ 0.91
Lims1-202ENSMUST00000020078 Cngb1E1AZ71 1325 aa20.67■□□□□ 0.9
Lims1-202ENSMUST00000020078 Esf1Q3V1V3 845 aaKnown RBP20.61■□□□□ 0.89
Lims1-202ENSMUST00000020078 Rpgrip1Q9EPQ2 1331 aa20.54■□□□□ 0.88
Lims1-202ENSMUST00000020078 Ccdc180J3QNE4 1664 aa20.51■□□□□ 0.87
Lims1-202ENSMUST00000020078 Rtl1Q7M732 1744 aa20.48■□□□□ 0.87
Lims1-202ENSMUST00000020078 Gab3Q8BSM5 595 aa20.42■□□□□ 0.86
Lims1-202ENSMUST00000020078 Zcchc6Q5BLK4 1491 aaKnown RBP20.32■□□□□ 0.84
Lims1-202ENSMUST00000020078 HrcG5E8J6 738 aa20.23■□□□□ 0.83
Lims1-202ENSMUST00000020078 Rb1cc1Q9ESK9 1588 aa19.94■□□□□ 0.78
Lims1-202ENSMUST00000020078 Npm2Q80W85 207 aa19.93■□□□□ 0.78
Lims1-202ENSMUST00000020078 Myt1lP97500 1187 aa19.91■□□□□ 0.78
Lims1-202ENSMUST00000020078 Acin1Q9JIX8 1338 aaKnown RBP19.87■□□□□ 0.77
Lims1-202ENSMUST00000020078 Zeb1Q64318 1117 aa19.79■□□□□ 0.76
Lims1-202ENSMUST00000020078 NacadQ5SWP3 1504 aa19.71■□□□□ 0.75
Lims1-202ENSMUST00000020078 Dcaf1Q80TR8 1506 aa19.68■□□□□ 0.74
Lims1-202ENSMUST00000020078 Il27Q8K3I6 234 aa19.58■□□□□ 0.73
Lims1-202ENSMUST00000020078 Kdm5dQ62240 1548 aa19.58■□□□□ 0.72
Lims1-202ENSMUST00000020078 Baz1aO88379 1555 aa19.58■□□□□ 0.72
Lims1-202ENSMUST00000020078 UbtfP25976 765 aaKnown RBP19.55■□□□□ 0.72
Lims1-202ENSMUST00000020078 Las1lA2BE28 776 aaKnown RBP19.49■□□□□ 0.71
Lims1-202ENSMUST00000020078 Wdr66E9Q743 1299 aa19.49■□□□□ 0.71
Lims1-202ENSMUST00000020078 Brd4Q9ESU6 1400 aaKnown RBP19.46■□□□□ 0.71
Lims1-202ENSMUST00000020078 Chic1Q8CBW7 227 aa19.41■□□□□ 0.7
Lims1-202ENSMUST00000020078 ScribQ80U72 1612 aa19.35■□□□□ 0.69
Lims1-202ENSMUST00000020078 NefmP08553 848 aa19.34■□□□□ 0.69
Lims1-202ENSMUST00000020078 Ube2uB1AUC4 352 aa19.29■□□□□ 0.68
Lims1-202ENSMUST00000020078 Cep164Q5DU05 1446 aa19.28■□□□□ 0.68
Lims1-202ENSMUST00000020078 Ap3b1Q9Z1T1 1105 aa19.16■□□□□ 0.66
Lims1-202ENSMUST00000020078 Pcgf6Q99NA9 353 aa19.11■□□□□ 0.65
Lims1-202ENSMUST00000020078 Mier1Q5UAK0 511 aa19.06■□□□□ 0.64
Lims1-202ENSMUST00000020078 Sycp2Q9CUU3 1500 aa19.03■□□□□ 0.64
Lims1-202ENSMUST00000020078 Golga3P55937 1487 aa18.99■□□□□ 0.63
Lims1-202ENSMUST00000020078 Npm1Q61937 292 aaKnown RBP18.96■□□□□ 0.63
Lims1-202ENSMUST00000020078 Plekhg3Q4VAC9 1341 aa18.94■□□□□ 0.62
Lims1-202ENSMUST00000020078 Crybg2B7ZCC2 1516 aa18.93■□□□□ 0.62
Lims1-202ENSMUST00000020078 Rsf1E9PWW9 1441 aaKnown RBP18.91■□□□□ 0.62
Lims1-202ENSMUST00000020078 Supt5hO55201 1082 aaKnown RBP18.88■□□□□ 0.61
Lims1-202ENSMUST00000020078 Fam50aQ9WV03 339 aaKnown RBP18.88■□□□□ 0.61
Lims1-202ENSMUST00000020078 Smarca2Q6DIC0 1577 aa18.82■□□□□ 0.6
Lims1-202ENSMUST00000020078 Cecr2E9Q2Z1 1453 aa18.8■□□□□ 0.6
Lims1-202ENSMUST00000020078 Ppargc1bQ8VHJ7 1014 aa18.76■□□□□ 0.59
Lims1-202ENSMUST00000020078 Clip1Q922J3 1391 aa18.76■□□□□ 0.59
Lims1-202ENSMUST00000020078 Lmod2Q3UHZ5 550 aa18.76■□□□□ 0.59
Lims1-202ENSMUST00000020078 Ubl4bQ9CQ84 188 aa18.74■□□□□ 0.59
Lims1-202ENSMUST00000020078 Ccdc88bQ4QRL3 1481 aa18.74■□□□□ 0.59
Lims1-202ENSMUST00000020078 TonslQ6NZL6 1363 aa18.68■□□□□ 0.58
Lims1-202ENSMUST00000020078 CftrP26361 1476 aa18.63■□□□□ 0.57
Lims1-202ENSMUST00000020078 Kif15Q6P9L6 1387 aa18.6■□□□□ 0.57
Lims1-202ENSMUST00000020078 NclP09405 707 aaKnown RBP18.55■□□□□ 0.56
Lims1-202ENSMUST00000020078 Synj1Q8CHC4 1574 aa18.54■□□□□ 0.56
Lims1-202ENSMUST00000020078 Cdk11bP24788 784 aaKnown RBP18.53■□□□□ 0.56
Lims1-202ENSMUST00000020078 Eid3Q3V124 375 aa18.5■□□□□ 0.55
Lims1-202ENSMUST00000020078 Pds5bQ4VA53 1446 aaKnown RBP18.5■□□□□ 0.55
Lims1-202ENSMUST00000020078 Neurod1Q60867 357 aa18.48■□□□□ 0.55
Lims1-202ENSMUST00000020078 Ercc6F8VPZ5 1481 aa18.47■□□□□ 0.55
Lims1-202ENSMUST00000020078 Nop58Q6DFW4 536 aaKnown RBP18.47■□□□□ 0.55
Lims1-202ENSMUST00000020078 Slc24a1Q91WD8 1130 aa18.43■□□□□ 0.54
Lims1-202ENSMUST00000020078 Fmn1Q05860 1466 aa18.42■□□□□ 0.54
Lims1-202ENSMUST00000020078 Setd5Q5XJV7 1441 aa18.41■□□□□ 0.54
Lims1-202ENSMUST00000020078 Sall2Q9QX96 1004 aa18.4■□□□□ 0.54
Lims1-202ENSMUST00000020078 Smarca4Q3TKT4 1613 aaKnown RBP18.35■□□□□ 0.53
Lims1-202ENSMUST00000020078 BlmO88700 1416 aa18.35■□□□□ 0.53
Lims1-202ENSMUST00000020078 CenpbP27790 599 aa18.34■□□□□ 0.53
Lims1-202ENSMUST00000020078 ClspnQ80YR7 1315 aa18.34■□□□□ 0.53
Lims1-202ENSMUST00000020078 Ccdc18Q640L5 1455 aa18.33■□□□□ 0.52
Lims1-202ENSMUST00000020078 Atad2bE9Q166 1460 aaKnown RBP18.31■□□□□ 0.52
Lims1-202ENSMUST00000020078 Cep162Q6ZQ06 1403 aa18.31■□□□□ 0.52
Lims1-202ENSMUST00000020078 Stra8P70278 393 aa18.31■□□□□ 0.52
Lims1-202ENSMUST00000020078 Eea1Q8BL66 1411 aa18.27■□□□□ 0.52
Lims1-202ENSMUST00000020078 Cttnbp2B9EJA2 1648 aa18.26■□□□□ 0.51
Lims1-202ENSMUST00000020078 Myt1Q8CFC2 1127 aa18.22■□□□□ 0.51
Lims1-202ENSMUST00000020078 Fkbp15Q6P9Q6 1216 aaKnown RBP18.2■□□□□ 0.5
Lims1-202ENSMUST00000020078 Zbtb7cQ8VCZ7 619 aa18.2■□□□□ 0.5
Lims1-202ENSMUST00000020078 Mapk8ip2Q9ERE9 830 aa18.19■□□□□ 0.5
Lims1-202ENSMUST00000020078 Chic2Q9D9G3 165 aa18.17■□□□□ 0.5
Lims1-202ENSMUST00000020078 BicraF8VPZ9 1578 aa18.16■□□□□ 0.5
Lims1-202ENSMUST00000020078 Rapgef2Q8CHG7 1496 aa18.14■□□□□ 0.5
Lims1-202ENSMUST00000020078 Iqgap2Q3UQ44 1575 aa18.14■□□□□ 0.49
Lims1-202ENSMUST00000020078 Aebp2Q9Z248 504 aaKnown RBP18.11■□□□□ 0.49
Lims1-202ENSMUST00000020078 Ifnlr1Q8CGK5 535 aa18.09■□□□□ 0.49
Lims1-202ENSMUST00000020078 Ccer2J3QPU5 274 aa18.08■□□□□ 0.49
Lims1-202ENSMUST00000020078 NrdcQ8BHG1 1161 aa18.06■□□□□ 0.48
Lims1-202ENSMUST00000020078 Cux2P70298 1426 aa18.05■□□□□ 0.48
Lims1-202ENSMUST00000020078 Hnrnpul2Q00PI9 745 aaKnown RBP18.02■□□□□ 0.48
Lims1-202ENSMUST00000020078 Phldb1Q6PDH0 1371 aaKnown RBP18.02■□□□□ 0.48
Lims1-202ENSMUST00000020078 Tnnt3Q9QZ47 272 aa17.97■□□□□ 0.47
Lims1-202ENSMUST00000020078 Os9Q8K2C7 672 aa17.97■□□□□ 0.47
Lims1-202ENSMUST00000020078 Cc2d2aQ8CFW7 1633 aa17.95■□□□□ 0.46
Lims1-202ENSMUST00000020078 Eif5bQ05D44 1216 aaKnown RBP17.94■□□□□ 0.46
Lims1-202ENSMUST00000020078 Csrnp3P59055 597 aa17.94■□□□□ 0.46
Lims1-202ENSMUST00000020078 Baz1bQ9Z277 1479 aa17.93■□□□□ 0.46
Lims1-202ENSMUST00000020078 Arhgap27A2AB59 869 aa17.91■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 109.5 ms