RNA–Protein interactions for RNA: ENSMUST00000011302.8

Brf1-201, Transcript of Transcription factor IIIB 90 kDa subunit, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Brf1, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1-201ENSMUST00000011302 NischQ80TM9 1593 aa40.33■■■■■ 4.05
Brf1-201ENSMUST00000011302 Abcc9P70170 1546 aa39.1■■■■□ 3.85
Brf1-201ENSMUST00000011302 Gm35339A0A140LHH9 1649 aa39.05■■■■□ 3.84
Brf1-201ENSMUST00000011302 Rhox8Q6VSS7 320 aa38.38■■■■□ 3.73
Brf1-201ENSMUST00000011302 Abcc8B2RUS7 1588 aa38.11■■■■□ 3.69
Brf1-201ENSMUST00000011302 Rtl1Q7M732 1744 aa37.6■■■■□ 3.61
Brf1-201ENSMUST00000011302 Ccdc180J3QNE4 1664 aa37.22■■■■□ 3.55
Brf1-201ENSMUST00000011302 Zcchc6Q5BLK4 1491 aaKnown RBP36.43■■■■□ 3.42
Brf1-201ENSMUST00000011302 Rpgrip1Q9EPQ2 1331 aa36.36■■■■□ 3.41
Brf1-201ENSMUST00000011302 Acin1Q9JIX8 1338 aaKnown RBP35.8■■■■□ 3.32
Brf1-201ENSMUST00000011302 Ehmt2Q9Z148 1263 aaKnown RBP35.79■■■■□ 3.32
Brf1-201ENSMUST00000011302 Ccdc136Q3TVA9 1136 aa35.6■■■■□ 3.29
Brf1-201ENSMUST00000011302 HrcG5E8J6 738 aa35.58■■■■□ 3.29
Brf1-201ENSMUST00000011302 Dcaf1Q80TR8 1506 aa35.43■■■■□ 3.26
Brf1-201ENSMUST00000011302 Rb1cc1Q9ESK9 1588 aa35.38■■■■□ 3.25
Brf1-201ENSMUST00000011302 ScribQ80U72 1612 aa35.26■■■■□ 3.23
Brf1-201ENSMUST00000011302 Trim41Q5NCC3 630 aa34.94■■■■□ 3.18
Brf1-201ENSMUST00000011302 Baz1aO88379 1555 aa34.92■■■■□ 3.18
Brf1-201ENSMUST00000011302 Pcgf6Q99NA9 353 aa34.79■■■■□ 3.16
Brf1-201ENSMUST00000011302 Kdm5dQ62240 1548 aa34.76■■■■□ 3.16
Brf1-201ENSMUST00000011302 Cep164Q5DU05 1446 aa34.33■■■■□ 3.09
Brf1-201ENSMUST00000011302 NacadQ5SWP3 1504 aa34.31■■■■□ 3.08
Brf1-201ENSMUST00000011302 Smarca2Q6DIC0 1577 aa34.18■■■■□ 3.06
Brf1-201ENSMUST00000011302 Supt5hO55201 1082 aaKnown RBP34.14■■■■□ 3.06
Brf1-201ENSMUST00000011302 Crybg2B7ZCC2 1516 aa33.99■■■■□ 3.03
Brf1-201ENSMUST00000011302 Chic1Q8CBW7 227 aa33.96■■■■□ 3.03
Brf1-201ENSMUST00000011302 Gab3Q8BSM5 595 aa33.93■■■■□ 3.02
Brf1-201ENSMUST00000011302 Cngb1E1AZ71 1325 aa33.92■■■■□ 3.02
Brf1-201ENSMUST00000011302 Rsf1E9PWW9 1441 aaKnown RBP33.85■■■■□ 3.01
Brf1-201ENSMUST00000011302 Zeb1Q64318 1117 aa33.6■■■□□ 2.97
Brf1-201ENSMUST00000011302 Sycp2Q9CUU3 1500 aa33.58■■■□□ 2.97
Brf1-201ENSMUST00000011302 Ccdc88bQ4QRL3 1481 aa33.55■■■□□ 2.96
Brf1-201ENSMUST00000011302 Brd4Q9ESU6 1400 aaKnown RBP33.47■■■□□ 2.95
Brf1-201ENSMUST00000011302 Mier1Q5UAK0 511 aa33.46■■■□□ 2.95
Brf1-201ENSMUST00000011302 Cecr2E9Q2Z1 1453 aa33.45■■■□□ 2.95
Brf1-201ENSMUST00000011302 Neurod1Q60867 357 aa33.45■■■□□ 2.94
Brf1-201ENSMUST00000011302 Golga3P55937 1487 aa33.35■■■□□ 2.93
Brf1-201ENSMUST00000011302 NefmP08553 848 aa33.34■■■□□ 2.93
Brf1-201ENSMUST00000011302 Synj1Q8CHC4 1574 aa33.19■■■□□ 2.9
Brf1-201ENSMUST00000011302 Sall2Q9QX96 1004 aa33.14■■■□□ 2.89
Brf1-201ENSMUST00000011302 Esf1Q3V1V3 845 aaKnown RBP33.12■■■□□ 2.89
Brf1-201ENSMUST00000011302 CftrP26361 1476 aa32.9■■■□□ 2.86
Brf1-201ENSMUST00000011302 UbtfP25976 765 aaKnown RBP32.86■■■□□ 2.85
Brf1-201ENSMUST00000011302 BicraF8VPZ9 1578 aa32.82■■■□□ 2.84
Brf1-201ENSMUST00000011302 Top2bQ64511 1612 aa32.77■■■□□ 2.84
Brf1-201ENSMUST00000011302 Aebp2Q9Z248 504 aaKnown RBP32.64■■■□□ 2.82
Brf1-201ENSMUST00000011302 Wdr66E9Q743 1299 aa32.61■■■□□ 2.81
Brf1-201ENSMUST00000011302 Cc2d2aQ8CFW7 1633 aa32.57■■■□□ 2.8
Brf1-201ENSMUST00000011302 Rapgef2Q8CHG7 1496 aa32.53■■■□□ 2.8
Brf1-201ENSMUST00000011302 Las1lA2BE28 776 aaKnown RBP32.53■■■□□ 2.8
Brf1-201ENSMUST00000011302 Cttnbp2B9EJA2 1648 aa32.53■■■□□ 2.8
Brf1-201ENSMUST00000011302 Myt1lP97500 1187 aa32.52■■■□□ 2.8
Brf1-201ENSMUST00000011302 Anks4bQ8K3X6 423 aa32.49■■■□□ 2.79
Brf1-201ENSMUST00000011302 Ppargc1bQ8VHJ7 1014 aa32.42■■■□□ 2.78
Brf1-201ENSMUST00000011302 Csrnp3P59055 597 aa32.37■■■□□ 2.77
Brf1-201ENSMUST00000011302 Cep162Q6ZQ06 1403 aa32.33■■■□□ 2.77
Brf1-201ENSMUST00000011302 1700123L14RikQ3V2K7 440 aa32.3■■■□□ 2.76
Brf1-201ENSMUST00000011302 Fmn1Q05860 1466 aa32.29■■■□□ 2.76
Brf1-201ENSMUST00000011302 Top2aQ01320 1528 aaKnown RBP32.26■■■□□ 2.76
Brf1-201ENSMUST00000011302 ClspnQ80YR7 1315 aa32.26■■■□□ 2.76
Brf1-201ENSMUST00000011302 Smarca4Q3TKT4 1613 aaKnown RBP32.23■■■□□ 2.75
Brf1-201ENSMUST00000011302 Npm2Q80W85 207 aa32.2■■■□□ 2.74
Brf1-201ENSMUST00000011302 Cdk11bP24788 784 aaKnown RBP32.19■■■□□ 2.74
Brf1-201ENSMUST00000011302 Nop58Q6DFW4 536 aaKnown RBP32.18■■■□□ 2.74
Brf1-201ENSMUST00000011302 Plekhg3Q4VAC9 1341 aa32.14■■■□□ 2.74
Brf1-201ENSMUST00000011302 TonslQ6NZL6 1363 aa32.12■■■□□ 2.73
Brf1-201ENSMUST00000011302 Clip1Q922J3 1391 aa32.05■■■□□ 2.72
Brf1-201ENSMUST00000011302 Ncapd3Q6ZQK0 1506 aa31.83■■■□□ 2.69
Brf1-201ENSMUST00000011302 Eif4g1Q6NZJ6 1600 aaKnown RBP31.78■■■□□ 2.68
Brf1-201ENSMUST00000011302 Iqgap2Q3UQ44 1575 aa31.78■■■□□ 2.68
Brf1-201ENSMUST00000011302 Aplp2Q06335 707 aa31.71■■■□□ 2.67
Brf1-201ENSMUST00000011302 Gm38655A0A286YDK6 273 aa31.67■■■□□ 2.66
Brf1-201ENSMUST00000011302 Ap3b1Q9Z1T1 1105 aa31.66■■■□□ 2.66
Brf1-201ENSMUST00000011302 Eid3Q3V124 375 aa31.66■■■□□ 2.66
Brf1-201ENSMUST00000011302 Arhgap35Q91YM2 1499 aa31.61■■■□□ 2.65
Brf1-201ENSMUST00000011302 PtprkP35822 1457 aa31.57■■■□□ 2.64
Brf1-201ENSMUST00000011302 Arap1Q4LDD4 1452 aa31.54■■■□□ 2.64
Brf1-201ENSMUST00000011302 Il27Q8K3I6 234 aa31.49■■■□□ 2.63
Brf1-201ENSMUST00000011302 Eea1Q8BL66 1411 aa31.49■■■□□ 2.63
Brf1-201ENSMUST00000011302 TnnQ80Z71 1560 aa31.46■■■□□ 2.63
Brf1-201ENSMUST00000011302 CenpbP27790 599 aa31.44■■■□□ 2.62
Brf1-201ENSMUST00000011302 Atad2bE9Q166 1460 aaKnown RBP31.44■■■□□ 2.62
Brf1-201ENSMUST00000011302 Setd5Q5XJV7 1441 aa31.39■■■□□ 2.62
Brf1-201ENSMUST00000011302 Kdm5bQ80Y84 1544 aa31.37■■■□□ 2.61
Brf1-201ENSMUST00000011302 NrkQ9R0G8 1455 aa31.37■■■□□ 2.61
Brf1-201ENSMUST00000011302 Arhgef5E9Q7D5 1581 aa31.33■■■□□ 2.61
Brf1-201ENSMUST00000011302 Ccdc18Q640L5 1455 aa31.27■■■□□ 2.6
Brf1-201ENSMUST00000011302 Mapk8ip2Q9ERE9 830 aa31.26■■■□□ 2.59
Brf1-201ENSMUST00000011302 Hnrnpul2Q00PI9 745 aaKnown RBP31.22■■■□□ 2.59
Brf1-201ENSMUST00000011302 Shroom4Q1W617 1475 aa31.17■■■□□ 2.58
Brf1-201ENSMUST00000011302 Kif15Q6P9L6 1387 aa31.16■■■□□ 2.58
Brf1-201ENSMUST00000011302 Frmpd1A2AKB4 1549 aa31.15■■■□□ 2.58
Brf1-201ENSMUST00000011302 Pds5bQ4VA53 1446 aaKnown RBP31.14■■■□□ 2.58
Brf1-201ENSMUST00000011302 BlmO88700 1416 aa31.13■■■□□ 2.57
Brf1-201ENSMUST00000011302 Baz1bQ9Z277 1479 aa31.13■■■□□ 2.57
Brf1-201ENSMUST00000011302 SafbD3YXK2 937 aaKnown RBP31.11■■■□□ 2.57
Brf1-201ENSMUST00000011302 AqrQ8CFQ3 1481 aaKnown RBP31.11■■■□□ 2.57
Brf1-201ENSMUST00000011302 Tiam1Q60610 1591 aa31.1■■■□□ 2.57
Brf1-201ENSMUST00000011302 Lamc3Q9R0B6 1581 aa31.09■■■□□ 2.57
Brf1-201ENSMUST00000011302 Fam50aQ9WV03 339 aaKnown RBP31.08■■■□□ 2.57
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms