RNA–Protein interactions for RNA: ENSMUST00000008052.12

Hmgcll1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgcll1, Length 3,737 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1-201ENSMUST00000008052 Rhox8Q6VSS7 320 aa18.25■□□□□ 0.51
Hmgcll1-201ENSMUST00000008052 NischQ80TM9 1593 aa17.99■□□□□ 0.47
Hmgcll1-201ENSMUST00000008052 Ehmt2Q9Z148 1263 aaKnown RBP17.68■□□□□ 0.42
Hmgcll1-201ENSMUST00000008052 Rpgrip1Q9EPQ2 1331 aa17.66■□□□□ 0.42
Hmgcll1-201ENSMUST00000008052 Gm35339A0A140LHH9 1649 aa17.47■□□□□ 0.39
Hmgcll1-201ENSMUST00000008052 Acin1Q9JIX8 1338 aaKnown RBP17.3■□□□□ 0.36
Hmgcll1-201ENSMUST00000008052 Abcc9P70170 1546 aa17.28■□□□□ 0.36
Hmgcll1-201ENSMUST00000008052 Ccdc180J3QNE4 1664 aa17.17■□□□□ 0.34
Hmgcll1-201ENSMUST00000008052 Pcgf6Q99NA9 353 aa17.11■□□□□ 0.33
Hmgcll1-201ENSMUST00000008052 Rtl1Q7M732 1744 aa17.09■□□□□ 0.33
Hmgcll1-201ENSMUST00000008052 Abcc8B2RUS7 1588 aa16.89■□□□□ 0.29
Hmgcll1-201ENSMUST00000008052 Ccdc136Q3TVA9 1136 aa16.83■□□□□ 0.29
Hmgcll1-201ENSMUST00000008052 Supt5hO55201 1082 aaKnown RBP16.75■□□□□ 0.27
Hmgcll1-201ENSMUST00000008052 Zeb1Q64318 1117 aa16.58■□□□□ 0.25
Hmgcll1-201ENSMUST00000008052 HrcG5E8J6 738 aa16.57■□□□□ 0.24
Hmgcll1-201ENSMUST00000008052 Zcchc6Q5BLK4 1491 aaKnown RBP16.55■□□□□ 0.24
Hmgcll1-201ENSMUST00000008052 Trim41Q5NCC3 630 aa16.53■□□□□ 0.24
Hmgcll1-201ENSMUST00000008052 Neurod1Q60867 357 aa16.53■□□□□ 0.24
Hmgcll1-201ENSMUST00000008052 Dcaf1Q80TR8 1506 aa16.46■□□□□ 0.23
Hmgcll1-201ENSMUST00000008052 Cngb1E1AZ71 1325 aa16.29■□□□□ 0.2
Hmgcll1-201ENSMUST00000008052 Gab3Q8BSM5 595 aa16.28■□□□□ 0.2
Hmgcll1-201ENSMUST00000008052 Las1lA2BE28 776 aaKnown RBP16.25■□□□□ 0.19
Hmgcll1-201ENSMUST00000008052 Sall2Q9QX96 1004 aa16.11■□□□□ 0.17
Hmgcll1-201ENSMUST00000008052 Wdr66E9Q743 1299 aa16.09■□□□□ 0.17
Hmgcll1-201ENSMUST00000008052 Csrnp3P59055 597 aa16.07■□□□□ 0.16
Hmgcll1-201ENSMUST00000008052 Ppargc1bQ8VHJ7 1014 aa16.06■□□□□ 0.16
Hmgcll1-201ENSMUST00000008052 1700123L14RikQ3V2K7 440 aa16.03■□□□□ 0.16
Hmgcll1-201ENSMUST00000008052 Mier1Q5UAK0 511 aa16.03■□□□□ 0.16
Hmgcll1-201ENSMUST00000008052 NefmP08553 848 aa15.99■□□□□ 0.15
Hmgcll1-201ENSMUST00000008052 Gm38655A0A286YDK6 273 aa15.93■□□□□ 0.14
Hmgcll1-201ENSMUST00000008052 Anks4bQ8K3X6 423 aa15.85■□□□□ 0.13
Hmgcll1-201ENSMUST00000008052 Chic1Q8CBW7 227 aa15.85■□□□□ 0.13
Hmgcll1-201ENSMUST00000008052 ScribQ80U72 1612 aa15.84■□□□□ 0.13
Hmgcll1-201ENSMUST00000008052 Cep164Q5DU05 1446 aa15.84■□□□□ 0.13
Hmgcll1-201ENSMUST00000008052 UbtfP25976 765 aaKnown RBP15.83■□□□□ 0.12
Hmgcll1-201ENSMUST00000008052 Rb1cc1Q9ESK9 1588 aa15.82■□□□□ 0.12
Hmgcll1-201ENSMUST00000008052 Cdk11bP24788 784 aaKnown RBP15.79■□□□□ 0.12
Hmgcll1-201ENSMUST00000008052 Nop58Q6DFW4 536 aaKnown RBP15.76■□□□□ 0.11
Hmgcll1-201ENSMUST00000008052 Aebp2Q9Z248 504 aaKnown RBP15.76■□□□□ 0.11
Hmgcll1-201ENSMUST00000008052 CenpbP27790 599 aa15.75■□□□□ 0.11
Hmgcll1-201ENSMUST00000008052 Rsf1E9PWW9 1441 aaKnown RBP15.58■□□□□ 0.08
Hmgcll1-201ENSMUST00000008052 Aplp2Q06335 707 aa15.56■□□□□ 0.08
Hmgcll1-201ENSMUST00000008052 Myt1lP97500 1187 aa15.55■□□□□ 0.08
Hmgcll1-201ENSMUST00000008052 Esf1Q3V1V3 845 aaKnown RBP15.54■□□□□ 0.08
Hmgcll1-201ENSMUST00000008052 Baz1aO88379 1555 aa15.53■□□□□ 0.08
Hmgcll1-201ENSMUST00000008052 ClspnQ80YR7 1315 aa15.52■□□□□ 0.08
Hmgcll1-201ENSMUST00000008052 Kdm5dQ62240 1548 aa15.5■□□□□ 0.07
Hmgcll1-201ENSMUST00000008052 Myt1Q8CFC2 1127 aa15.45■□□□□ 0.06
Hmgcll1-201ENSMUST00000008052 Mapk8ip2Q9ERE9 830 aa15.43■□□□□ 0.06
Hmgcll1-201ENSMUST00000008052 Ccdc88bQ4QRL3 1481 aa15.4■□□□□ 0.06
Hmgcll1-201ENSMUST00000008052 TonslQ6NZL6 1363 aa15.4■□□□□ 0.06
Hmgcll1-201ENSMUST00000008052 SafbD3YXK2 937 aaKnown RBP15.36■□□□□ 0.05
Hmgcll1-201ENSMUST00000008052 DiexfQ8BTT6 772 aaKnown RBP15.35■□□□□ 0.05
Hmgcll1-201ENSMUST00000008052 Ap3b1Q9Z1T1 1105 aa15.33■□□□□ 0.05
Hmgcll1-201ENSMUST00000008052 Fam71e1A1L3C1 212 aa15.32■□□□□ 0.04
Hmgcll1-201ENSMUST00000008052 NacadQ5SWP3 1504 aa15.31■□□□□ 0.04
Hmgcll1-201ENSMUST00000008052 Plekhg3Q4VAC9 1341 aa15.27■□□□□ 0.04
Hmgcll1-201ENSMUST00000008052 Hnrnpul2Q00PI9 745 aaKnown RBP15.27■□□□□ 0.03
Hmgcll1-201ENSMUST00000008052 Eid3Q3V124 375 aa15.26■□□□□ 0.03
Hmgcll1-201ENSMUST00000008052 Npm2Q80W85 207 aa15.25■□□□□ 0.03
Hmgcll1-201ENSMUST00000008052 Bcl11aQ9QYE3 773 aa15.18■□□□□ 0.02
Hmgcll1-201ENSMUST00000008052 Smarca2Q6DIC0 1577 aa15.15■□□□□ 0.02
Hmgcll1-201ENSMUST00000008052 Golga3P55937 1487 aa15.14■□□□□ 0.01
Hmgcll1-201ENSMUST00000008052 Brd4Q9ESU6 1400 aaKnown RBP15.12■□□□□ 0.01
Hmgcll1-201ENSMUST00000008052 Slc24a1Q91WD8 1130 aa15.09■□□□□ 0.01
Hmgcll1-201ENSMUST00000008052 Tnnt3Q9QZ47 272 aa15.08■□□□□ 0
Hmgcll1-201ENSMUST00000008052 Sycp2Q9CUU3 1500 aa15.01□□□□□ -0.01
Hmgcll1-201ENSMUST00000008052 Cecr2E9Q2Z1 1453 aa15.01□□□□□ -0.01
Hmgcll1-201ENSMUST00000008052 Ifnlr1Q8CGK5 535 aa15□□□□□ -0.01
Hmgcll1-201ENSMUST00000008052 Crybg2B7ZCC2 1516 aa15□□□□□ -0.01
Hmgcll1-201ENSMUST00000008052 Clip1Q922J3 1391 aa14.97□□□□□ -0.01
Hmgcll1-201ENSMUST00000008052 Ttbk1Q6PCN3 1308 aa14.95□□□□□ -0.02
Hmgcll1-201ENSMUST00000008052 NclP09405 707 aaKnown RBP14.95□□□□□ -0.02
Hmgcll1-201ENSMUST00000008052 Anp32aO35381 247 aa14.94□□□□□ -0.02
Hmgcll1-201ENSMUST00000008052 PrkcshO08795 521 aa14.88□□□□□ -0.03
Hmgcll1-201ENSMUST00000008052 Fam50aQ9WV03 339 aaKnown RBP14.88□□□□□ -0.03
Hmgcll1-201ENSMUST00000008052 Synj1Q8CHC4 1574 aa14.87□□□□□ -0.03
Hmgcll1-201ENSMUST00000008052 Eif5bQ05D44 1216 aaKnown RBP14.87□□□□□ -0.03
Hmgcll1-201ENSMUST00000008052 Calr4Q3TQS0 420 aa14.83□□□□□ -0.03
Hmgcll1-201ENSMUST00000008052 Stra8P70278 393 aa14.83□□□□□ -0.04
Hmgcll1-201ENSMUST00000008052 Cep162Q6ZQ06 1403 aa14.83□□□□□ -0.04
Hmgcll1-201ENSMUST00000008052 Nolc1E9Q5C9 702 aaKnown RBP14.83□□□□□ -0.04
Hmgcll1-201ENSMUST00000008052 Rapgef2Q8CHG7 1496 aa14.79□□□□□ -0.04
Hmgcll1-201ENSMUST00000008052 Il27Q8K3I6 234 aa14.79□□□□□ -0.04
Hmgcll1-201ENSMUST00000008052 Pelp1Q9DBD5 1123 aaKnown RBP14.79□□□□□ -0.04
Hmgcll1-201ENSMUST00000008052 Ube2uB1AUC4 352 aa14.78□□□□□ -0.04
Hmgcll1-201ENSMUST00000008052 Ppp4r2Q0VGB7 417 aa14.75□□□□□ -0.05
Hmgcll1-201ENSMUST00000008052 Znf710Q3U288 666 aa14.75□□□□□ -0.05
Hmgcll1-201ENSMUST00000008052 BicraF8VPZ9 1578 aa14.74□□□□□ -0.05
Hmgcll1-201ENSMUST00000008052 CftrP26361 1476 aa14.72□□□□□ -0.05
Hmgcll1-201ENSMUST00000008052 Lmod2Q3UHZ5 550 aa14.71□□□□□ -0.05
Hmgcll1-201ENSMUST00000008052 Ncapd3Q6ZQK0 1506 aa14.67□□□□□ -0.06
Hmgcll1-201ENSMUST00000008052 Supt16hQ920B9 1047 aa14.67□□□□□ -0.06
Hmgcll1-201ENSMUST00000008052 Cc2d2aQ8CFW7 1633 aa14.66□□□□□ -0.06
Hmgcll1-201ENSMUST00000008052 P3h3Q8CG70 732 aa14.66□□□□□ -0.06
Hmgcll1-201ENSMUST00000008052 Rtl5Q5DTT4 599 aa14.62□□□□□ -0.07
Hmgcll1-201ENSMUST00000008052 Hspa5P20029 655 aaKnown RBP14.61□□□□□ -0.07
Hmgcll1-201ENSMUST00000008052 Sin3aQ60520 1274 aaKnown RBP14.61□□□□□ -0.07
Hmgcll1-201ENSMUST00000008052 Rpap1Q80TE0 1409 aa14.6□□□□□ -0.07
Hmgcll1-201ENSMUST00000008052 Wdr43Q6ZQL4 677 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms