RNA–Protein interactions for RNA: ENSMUST00000004428.13

Clcn5-201, Transcript of H(+)/Cl(-) exchange transporter 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcn5, Length 8,390 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5-201ENSMUST00000004428 Rpgrip1Q9EPQ2 1331 aa11.22□□□□□ -0.61
Clcn5-201ENSMUST00000004428 Cngb1E1AZ71 1325 aa11.08□□□□□ -0.64
Clcn5-201ENSMUST00000004428 Pelp1Q9DBD5 1123 aaKnown RBP10.89□□□□□ -0.67
Clcn5-201ENSMUST00000004428 Las1lA2BE28 776 aaKnown RBP10.85□□□□□ -0.67
Clcn5-201ENSMUST00000004428 Wdr66E9Q743 1299 aa10.71□□□□□ -0.69
Clcn5-201ENSMUST00000004428 Myt1Q8CFC2 1127 aa10.57□□□□□ -0.72
Clcn5-201ENSMUST00000004428 NischQ80TM9 1593 aa10.32□□□□□ -0.76
Clcn5-201ENSMUST00000004428 Rhox8Q6VSS7 320 aa10.28□□□□□ -0.76
Clcn5-201ENSMUST00000004428 4930567H17RikQ3V0K5 233 aa10.18□□□□□ -0.78
Clcn5-201ENSMUST00000004428 Rtl1Q7M732 1744 aa10.09□□□□□ -0.79
Clcn5-201ENSMUST00000004428 Stra8P70278 393 aa10.09□□□□□ -0.79
Clcn5-201ENSMUST00000004428 Rtl5Q5DTT4 599 aa9.95□□□□□ -0.82
Clcn5-201ENSMUST00000004428 CenpbP27790 599 aa9.91□□□□□ -0.82
Clcn5-201ENSMUST00000004428 Zeb1Q64318 1117 aa9.86□□□□□ -0.83
Clcn5-201ENSMUST00000004428 Amer1Q7TS75 1132 aa9.85□□□□□ -0.83
Clcn5-201ENSMUST00000004428 Abcc9P70170 1546 aa9.83□□□□□ -0.84
Clcn5-201ENSMUST00000004428 Gm35339A0A140LHH9 1649 aa9.81□□□□□ -0.84
Clcn5-201ENSMUST00000004428 Ccdc180J3QNE4 1664 aa9.67□□□□□ -0.86
Clcn5-201ENSMUST00000004428 Tnnt3Q9QZ47 272 aa9.67□□□□□ -0.86
Clcn5-201ENSMUST00000004428 NefmP08553 848 aa9.63□□□□□ -0.87
Clcn5-201ENSMUST00000004428 Abcc8B2RUS7 1588 aa9.61□□□□□ -0.87
Clcn5-201ENSMUST00000004428 Ythdc1E9Q5K9 736 aaKnown RBP9.59□□□□□ -0.87
Clcn5-201ENSMUST00000004428 Neurod1Q60867 357 aa9.58□□□□□ -0.88
Clcn5-201ENSMUST00000004428 Ccdc9Q8VC31 543 aaKnown RBP9.56□□□□□ -0.88
Clcn5-201ENSMUST00000004428 Ehmt2Q9Z148 1263 aaKnown RBP9.52□□□□□ -0.89
Clcn5-201ENSMUST00000004428 Trim41Q5NCC3 630 aa9.48□□□□□ -0.89
Clcn5-201ENSMUST00000004428 Anp32bQ9EST5 272 aaKnown RBP9.45□□□□□ -0.9
Clcn5-201ENSMUST00000004428 Eif5bQ05D44 1216 aaKnown RBP9.38□□□□□ -0.91
Clcn5-201ENSMUST00000004428 Acin1Q9JIX8 1338 aaKnown RBP9.37□□□□□ -0.91
Clcn5-201ENSMUST00000004428 Myt1lP97500 1187 aa9.36□□□□□ -0.91
Clcn5-201ENSMUST00000004428 NeflP08551 543 aa9.33□□□□□ -0.92
Clcn5-201ENSMUST00000004428 Supt5hO55201 1082 aaKnown RBP9.32□□□□□ -0.92
Clcn5-201ENSMUST00000004428 Ube2uB1AUC4 352 aa9.28□□□□□ -0.92
Clcn5-201ENSMUST00000004428 Hdac5Q9Z2V6 1113 aa9.26□□□□□ -0.93
Clcn5-201ENSMUST00000004428 Esf1Q3V1V3 845 aaKnown RBP9.26□□□□□ -0.93
Clcn5-201ENSMUST00000004428 Dcaf1Q80TR8 1506 aa9.23□□□□□ -0.93
Clcn5-201ENSMUST00000004428 Ttbk1Q6PCN3 1308 aa9.22□□□□□ -0.93
Clcn5-201ENSMUST00000004428 DiexfQ8BTT6 772 aaKnown RBP9.18□□□□□ -0.94
Clcn5-201ENSMUST00000004428 NacadQ5SWP3 1504 aa9.16□□□□□ -0.94
Clcn5-201ENSMUST00000004428 4933416C03RikQ3V063 378 aa9.15□□□□□ -0.94
Clcn5-201ENSMUST00000004428 Ccdc136Q3TVA9 1136 aa9.15□□□□□ -0.94
Clcn5-201ENSMUST00000004428 Pcgf6Q99NA9 353 aa9.15□□□□□ -0.94
Clcn5-201ENSMUST00000004428 HrcG5E8J6 738 aa9.12□□□□□ -0.95
Clcn5-201ENSMUST00000004428 Cdk11bP24788 784 aaKnown RBP9.11□□□□□ -0.95
Clcn5-201ENSMUST00000004428 Zcchc6Q5BLK4 1491 aaKnown RBP9.1□□□□□ -0.95
Clcn5-201ENSMUST00000004428 NrdcQ8BHG1 1161 aa9.08□□□□□ -0.96
Clcn5-201ENSMUST00000004428 Rb1cc1Q9ESK9 1588 aa9.06□□□□□ -0.96
Clcn5-201ENSMUST00000004428 Adam1bQ8R534 806 aa9.02□□□□□ -0.97
Clcn5-201ENSMUST00000004428 Upf2A2AT37 1269 aaKnown RBP9.01□□□□□ -0.97
Clcn5-201ENSMUST00000004428 Brd4Q9ESU6 1400 aaKnown RBP9.01□□□□□ -0.97
Clcn5-201ENSMUST00000004428 Anp32aO35381 247 aa8.98□□□□□ -0.97
Clcn5-201ENSMUST00000004428 Baz1aO88379 1555 aa8.97□□□□□ -0.97
Clcn5-201ENSMUST00000004428 Polr3glQ8R0C0 218 aa8.95□□□□□ -0.98
Clcn5-201ENSMUST00000004428 Crybg2B7ZCC2 1516 aa8.94□□□□□ -0.98
Clcn5-201ENSMUST00000004428 Npm2Q80W85 207 aa8.92□□□□□ -0.98
Clcn5-201ENSMUST00000004428 Trim44Q9QXA7 346 aa8.85□□□□□ -0.99
Clcn5-201ENSMUST00000004428 Kdm5dQ62240 1548 aa8.85□□□□□ -0.99
Clcn5-201ENSMUST00000004428 Nop58Q6DFW4 536 aaKnown RBP8.82□□□□□ -1
Clcn5-201ENSMUST00000004428 Ccer2J3QPU5 274 aa8.82□□□□□ -1
Clcn5-201ENSMUST00000004428 CatipB9EKE5 520 aa8.81□□□□□ -1
Clcn5-201ENSMUST00000004428 4933402E13RikQ9D4D2 429 aa8.8□□□□□ -1
Clcn5-201ENSMUST00000004428 NclP09405 707 aaKnown RBP8.8□□□□□ -1
Clcn5-201ENSMUST00000004428 Zfp777B9EKF4 885 aa8.79□□□□□ -1
Clcn5-201ENSMUST00000004428 PtmsQ9D0J8 101 aaKnown RBP8.78□□□□□ -1
Clcn5-201ENSMUST00000004428 Calcoco2A2A6M5 331 aa8.77□□□□□ -1.01
Clcn5-201ENSMUST00000004428 Aplp2Q06335 707 aa8.76□□□□□ -1.01
Clcn5-201ENSMUST00000004428 Hmgb3O54879 200 aaKnown RBP8.74□□□□□ -1.01
Clcn5-201ENSMUST00000004428 Hoxa7P02830 229 aa8.74□□□□□ -1.01
Clcn5-201ENSMUST00000004428 Sycp2Q9CUU3 1500 aa8.73□□□□□ -1.01
Clcn5-201ENSMUST00000004428 Chmp4bQ9D8B3 224 aaKnown RBP8.73□□□□□ -1.01
Clcn5-201ENSMUST00000004428 Pds5bQ4VA53 1446 aaKnown RBP8.72□□□□□ -1.01
Clcn5-201ENSMUST00000004428 Ercc6F8VPZ5 1481 aa8.72□□□□□ -1.01
Clcn5-201ENSMUST00000004428 Htatsf1Q8BGC0 757 aa8.72□□□□□ -1.01
Clcn5-201ENSMUST00000004428 Map7d2A2AG50 781 aa8.7□□□□□ -1.02
Clcn5-201ENSMUST00000004428 Rangap1P46061 589 aaKnown RBP8.7□□□□□ -1.02
Clcn5-201ENSMUST00000004428 Arid4bA2CG63 1314 aaKnown RBP8.7□□□□□ -1.02
Clcn5-201ENSMUST00000004428 Hsp90aa1P07901 733 aaKnown RBP8.7□□□□□ -1.02
Clcn5-201ENSMUST00000004428 ClspnQ80YR7 1315 aa8.69□□□□□ -1.02
Clcn5-201ENSMUST00000004428 Npm1Q61937 292 aaKnown RBP8.69□□□□□ -1.02
Clcn5-201ENSMUST00000004428 Gab3Q8BSM5 595 aa8.69□□□□□ -1.02
Clcn5-201ENSMUST00000004428 ScribQ80U72 1612 aa8.68□□□□□ -1.02
Clcn5-201ENSMUST00000004428 Anks4bQ8K3X6 423 aa8.67□□□□□ -1.02
Clcn5-201ENSMUST00000004428 Cep164Q5DU05 1446 aa8.66□□□□□ -1.02
Clcn5-201ENSMUST00000004428 DaxxO35613 739 aa8.65□□□□□ -1.03
Clcn5-201ENSMUST00000004428 TonslQ6NZL6 1363 aa8.64□□□□□ -1.03
Clcn5-201ENSMUST00000004428 Gm973E9Q295 1059 aa8.64□□□□□ -1.03
Clcn5-201ENSMUST00000004428 Calr4Q3TQS0 420 aa8.64□□□□□ -1.03
Clcn5-201ENSMUST00000004428 CalrP14211 416 aaKnown RBP8.62□□□□□ -1.03
Clcn5-201ENSMUST00000004428 SetQ9EQU5 289 aaKnown RBP8.61□□□□□ -1.03
Clcn5-201ENSMUST00000004428 Hmgb1P63158 215 aaKnown RBP8.61□□□□□ -1.03
Clcn5-201ENSMUST00000004428 Rsf1E9PWW9 1441 aaKnown RBP8.6□□□□□ -1.03
Clcn5-201ENSMUST00000004428 Dusp9Q7TNL7 452 aa8.6□□□□□ -1.03
Clcn5-201ENSMUST00000004428 Smarca2Q6DIC0 1577 aa8.6□□□□□ -1.03
Clcn5-201ENSMUST00000004428 Csrnp3P59055 597 aa8.59□□□□□ -1.03
Clcn5-201ENSMUST00000004428 Mbd3Q9Z2D8 285 aaKnown RBP8.59□□□□□ -1.03
Clcn5-201ENSMUST00000004428 Slc24a1Q91WD8 1130 aa8.59□□□□□ -1.03
Clcn5-201ENSMUST00000004428 Golga3P55937 1487 aa8.58□□□□□ -1.04
Clcn5-201ENSMUST00000004428 UbtfP25976 765 aaKnown RBP8.58□□□□□ -1.04
Clcn5-201ENSMUST00000004428 Tnnt2P50752 301 aa8.58□□□□□ -1.04
Clcn5-201ENSMUST00000004428 Lmod3E9QA62 571 aa8.57□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms