RNA–Protein interactions for RNA: ENSMUST00000003912.6

Calr-201, Transcript of Calreticulin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Calr, Length 2,184 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Calr-201ENSMUST00000003912 Gm35339A0A140LHH9 1649 aa19.29■□□□□ 0.68
Calr-201ENSMUST00000003912 NischQ80TM9 1593 aa18.86■□□□□ 0.61
Calr-201ENSMUST00000003912 Abcc9P70170 1546 aa18.56■□□□□ 0.56
Calr-201ENSMUST00000003912 Abcc8B2RUS7 1588 aa18.4■□□□□ 0.54
Calr-201ENSMUST00000003912 Rpgrip1Q9EPQ2 1331 aa18.07■□□□□ 0.48
Calr-201ENSMUST00000003912 ScribQ80U72 1612 aa18.02■□□□□ 0.48
Calr-201ENSMUST00000003912 Rtl1Q7M732 1744 aa17.97■□□□□ 0.47
Calr-201ENSMUST00000003912 Ccdc180J3QNE4 1664 aa17.7■□□□□ 0.42
Calr-201ENSMUST00000003912 NacadQ5SWP3 1504 aa17.4■□□□□ 0.38
Calr-201ENSMUST00000003912 Myt1Q8CFC2 1127 aa17.35■□□□□ 0.37
Calr-201ENSMUST00000003912 Dnajc5bQ9CQ94 199 aa17.31■□□□□ 0.36
Calr-201ENSMUST00000003912 Kdm5dQ62240 1548 aa17.31■□□□□ 0.36
Calr-201ENSMUST00000003912 Rhox8Q6VSS7 320 aa17.25■□□□□ 0.35
Calr-201ENSMUST00000003912 Acin1Q9JIX8 1338 aaKnown RBP17.22■□□□□ 0.35
Calr-201ENSMUST00000003912 Pcgf6Q99NA9 353 aa17.14■□□□□ 0.33
Calr-201ENSMUST00000003912 Sycp2Q9CUU3 1500 aa17.09■□□□□ 0.33
Calr-201ENSMUST00000003912 Zcchc6Q5BLK4 1491 aaKnown RBP17.02■□□□□ 0.31
Calr-201ENSMUST00000003912 BicraF8VPZ9 1578 aa16.94■□□□□ 0.3
Calr-201ENSMUST00000003912 Las1lA2BE28 776 aaKnown RBP16.9■□□□□ 0.3
Calr-201ENSMUST00000003912 DiexfQ8BTT6 772 aaKnown RBP16.89■□□□□ 0.3
Calr-201ENSMUST00000003912 Dcaf1Q80TR8 1506 aa16.87■□□□□ 0.29
Calr-201ENSMUST00000003912 CenpbP27790 599 aa16.81■□□□□ 0.28
Calr-201ENSMUST00000003912 HrcG5E8J6 738 aa16.75■□□□□ 0.27
Calr-201ENSMUST00000003912 Thoc2B1AZI6 1594 aaKnown RBP16.6■□□□□ 0.25
Calr-201ENSMUST00000003912 Pds5bQ4VA53 1446 aaKnown RBP16.57■□□□□ 0.24
Calr-201ENSMUST00000003912 Trim41Q5NCC3 630 aa16.48■□□□□ 0.23
Calr-201ENSMUST00000003912 Rb1cc1Q9ESK9 1588 aa16.37■□□□□ 0.21
Calr-201ENSMUST00000003912 Bcl11aQ9QYE3 773 aa16.36■□□□□ 0.21
Calr-201ENSMUST00000003912 Ehmt2Q9Z148 1263 aaKnown RBP16.36■□□□□ 0.21
Calr-201ENSMUST00000003912 Cc2d2aQ8CFW7 1633 aa16.31■□□□□ 0.2
Calr-201ENSMUST00000003912 Atad2bE9Q166 1460 aaKnown RBP16.31■□□□□ 0.2
Calr-201ENSMUST00000003912 Amer1Q7TS75 1132 aa16.29■□□□□ 0.2
Calr-201ENSMUST00000003912 Supt5hO55201 1082 aaKnown RBP16.23■□□□□ 0.19
Calr-201ENSMUST00000003912 Neurod1Q60867 357 aa16.2■□□□□ 0.18
Calr-201ENSMUST00000003912 Ercc6F8VPZ5 1481 aa16.17■□□□□ 0.18
Calr-201ENSMUST00000003912 Crybg2B7ZCC2 1516 aa16.16■□□□□ 0.18
Calr-201ENSMUST00000003912 Dnajc5P60904 198 aa16.15■□□□□ 0.18
Calr-201ENSMUST00000003912 1700123L14RikQ3V2K7 440 aa16.15■□□□□ 0.18
Calr-201ENSMUST00000003912 Fam135aQ6NS59 1506 aa16.12■□□□□ 0.17
Calr-201ENSMUST00000003912 Baz1aO88379 1555 aa16.11■□□□□ 0.17
Calr-201ENSMUST00000003912 Smarca2Q6DIC0 1577 aa16.05■□□□□ 0.16
Calr-201ENSMUST00000003912 Cep164Q5DU05 1446 aa16.03■□□□□ 0.16
Calr-201ENSMUST00000003912 Aplp2Q06335 707 aa15.97■□□□□ 0.15
Calr-201ENSMUST00000003912 Smarca4Q3TKT4 1613 aaKnown RBP15.95■□□□□ 0.14
Calr-201ENSMUST00000003912 Iqgap2Q3UQ44 1575 aa15.94■□□□□ 0.14
Calr-201ENSMUST00000003912 Phldb1Q6PDH0 1371 aaKnown RBP15.94■□□□□ 0.14
Calr-201ENSMUST00000003912 NefmP08553 848 aa15.92■□□□□ 0.14
Calr-201ENSMUST00000003912 Baz1bQ9Z277 1479 aa15.91■□□□□ 0.14
Calr-201ENSMUST00000003912 Ccdc136Q3TVA9 1136 aa15.9■□□□□ 0.14
Calr-201ENSMUST00000003912 Frmpd1A2AKB4 1549 aa15.89■□□□□ 0.13
Calr-201ENSMUST00000003912 Wdr62Q3U3T8 1523 aa15.89■□□□□ 0.13
Calr-201ENSMUST00000003912 Anks4bQ8K3X6 423 aa15.89■□□□□ 0.13
Calr-201ENSMUST00000003912 Cngb1E1AZ71 1325 aa15.86■□□□□ 0.13
Calr-201ENSMUST00000003912 Ubl4bQ9CQ84 188 aa15.84■□□□□ 0.13
Calr-201ENSMUST00000003912 Cecr2E9Q2Z1 1453 aa15.81■□□□□ 0.12
Calr-201ENSMUST00000003912 PrkcshO08795 521 aa15.76■□□□□ 0.11
Calr-201ENSMUST00000003912 Mrc2Q64449 1479 aa15.75■□□□□ 0.11
Calr-201ENSMUST00000003912 CatipB9EKE5 520 aa15.75■□□□□ 0.11
Calr-201ENSMUST00000003912 Zeb1Q64318 1117 aa15.68■□□□□ 0.1
Calr-201ENSMUST00000003912 Sall2Q9QX96 1004 aa15.67■□□□□ 0.1
Calr-201ENSMUST00000003912 Csrnp3P59055 597 aa15.65■□□□□ 0.1
Calr-201ENSMUST00000003912 Mier1Q5UAK0 511 aa15.58■□□□□ 0.08
Calr-201ENSMUST00000003912 Unc13aQ4KUS2 1712 aa15.58■□□□□ 0.08
Calr-201ENSMUST00000003912 Rsf1E9PWW9 1441 aaKnown RBP15.48■□□□□ 0.07
Calr-201ENSMUST00000003912 Cdk11bP24788 784 aaKnown RBP15.43■□□□□ 0.06
Calr-201ENSMUST00000003912 Lrriq1Q0P5X1 1673 aa15.42■□□□□ 0.06
Calr-201ENSMUST00000003912 ClspnQ80YR7 1315 aa15.39■□□□□ 0.05
Calr-201ENSMUST00000003912 Nop58Q6DFW4 536 aaKnown RBP15.36■□□□□ 0.05
Calr-201ENSMUST00000003912 Rtl5Q5DTT4 599 aa15.35■□□□□ 0.05
Calr-201ENSMUST00000003912 NrdcQ8BHG1 1161 aa15.35■□□□□ 0.05
Calr-201ENSMUST00000003912 Chic1Q8CBW7 227 aa15.35■□□□□ 0.05
Calr-201ENSMUST00000003912 Shroom2A2ALU4 1481 aa15.34■□□□□ 0.05
Calr-201ENSMUST00000003912 CftrP26361 1476 aa15.34■□□□□ 0.05
Calr-201ENSMUST00000003912 Pknox2Q8BG99 474 aa15.3■□□□□ 0.04
Calr-201ENSMUST00000003912 Fgd1P52734 960 aa15.29■□□□□ 0.04
Calr-201ENSMUST00000003912 Cttnbp2B9EJA2 1648 aa15.27■□□□□ 0.04
Calr-201ENSMUST00000003912 Cux2P70298 1426 aa15.27■□□□□ 0.03
Calr-201ENSMUST00000003912 Golga3P55937 1487 aa15.27■□□□□ 0.03
Calr-201ENSMUST00000003912 Brd4Q9ESU6 1400 aaKnown RBP15.26■□□□□ 0.03
Calr-201ENSMUST00000003912 Ccdc88bQ4QRL3 1481 aa15.26■□□□□ 0.03
Calr-201ENSMUST00000003912 Aebp2Q9Z248 504 aaKnown RBP15.25■□□□□ 0.03
Calr-201ENSMUST00000003912 Col17a1Q07563 1470 aa15.25■□□□□ 0.03
Calr-201ENSMUST00000003912 Gab3Q8BSM5 595 aa15.24■□□□□ 0.03
Calr-201ENSMUST00000003912 Wdr66E9Q743 1299 aa15.24■□□□□ 0.03
Calr-201ENSMUST00000003912 Synj1Q8CHC4 1574 aa15.23■□□□□ 0.03
Calr-201ENSMUST00000003912 Kif21aQ9QXL2 1672 aa15.21■□□□□ 0.02
Calr-201ENSMUST00000003912 Eif4g3Q80XI3 1579 aaKnown RBP15.19■□□□□ 0.02
Calr-201ENSMUST00000003912 Kif15Q6P9L6 1387 aa15.17■□□□□ 0.02
Calr-201ENSMUST00000003912 Pabpn1Q8CCS6 302 aaKnown RBP15.12■□□□□ 0.01
Calr-201ENSMUST00000003912 Ifnlr1Q8CGK5 535 aa15.12■□□□□ 0.01
Calr-201ENSMUST00000003912 Fam71e1A1L3C1 212 aa15.11■□□□□ 0.01
Calr-201ENSMUST00000003912 Hdac5Q9Z2V6 1113 aa15.09■□□□□ 0.01
Calr-201ENSMUST00000003912 Npm1Q61937 292 aaKnown RBP15.08■□□□□ 0.01
Calr-201ENSMUST00000003912 Tnnt3Q9QZ47 272 aa15.08■□□□□ 0
Calr-201ENSMUST00000003912 TonslQ6NZL6 1363 aa15.06■□□□□ 0
Calr-201ENSMUST00000003912 Top2bQ64511 1612 aa15.05■□□□□ -0
Calr-201ENSMUST00000003912 Esf1Q3V1V3 845 aaKnown RBP15.04■□□□□ -0
Calr-201ENSMUST00000003912 Pelp1Q9DBD5 1123 aaKnown RBP15.04■□□□□ -0
Calr-201ENSMUST00000003912 Rapgef2Q8CHG7 1496 aa15.03■□□□□ -0
Calr-201ENSMUST00000003912 BccipQ9CWI3 316 aa15.02■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms