RNA–Protein interactions for RNA: ENSMUST00000003550.10

Ncstn-201, Transcript of Nicastrin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncstn, Length 2,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncstn-201ENSMUST00000003550 NischQ80TM9 1593 aa20.58■□□□□ 0.88
Ncstn-201ENSMUST00000003550 Abcc9P70170 1546 aa19.95■□□□□ 0.78
Ncstn-201ENSMUST00000003550 Gm35339A0A140LHH9 1649 aa19.95■□□□□ 0.78
Ncstn-201ENSMUST00000003550 Rhox8Q6VSS7 320 aa19.52■□□□□ 0.72
Ncstn-201ENSMUST00000003550 Abcc8B2RUS7 1588 aa19.46■□□□□ 0.71
Ncstn-201ENSMUST00000003550 Rtl1Q7M732 1744 aa19.12■□□□□ 0.65
Ncstn-201ENSMUST00000003550 Ccdc180J3QNE4 1664 aa18.92■□□□□ 0.62
Ncstn-201ENSMUST00000003550 Zcchc6Q5BLK4 1491 aaKnown RBP18.56■□□□□ 0.56
Ncstn-201ENSMUST00000003550 Rpgrip1Q9EPQ2 1331 aa18.42■□□□□ 0.54
Ncstn-201ENSMUST00000003550 Ehmt2Q9Z148 1263 aaKnown RBP18.17■□□□□ 0.5
Ncstn-201ENSMUST00000003550 Acin1Q9JIX8 1338 aaKnown RBP18.17■□□□□ 0.5
Ncstn-201ENSMUST00000003550 Ccdc136Q3TVA9 1136 aa18.12■□□□□ 0.49
Ncstn-201ENSMUST00000003550 HrcG5E8J6 738 aa18.09■□□□□ 0.49
Ncstn-201ENSMUST00000003550 Dcaf1Q80TR8 1506 aa18.08■□□□□ 0.49
Ncstn-201ENSMUST00000003550 Rb1cc1Q9ESK9 1588 aa18.04■□□□□ 0.48
Ncstn-201ENSMUST00000003550 ScribQ80U72 1612 aa18.02■□□□□ 0.47
Ncstn-201ENSMUST00000003550 Baz1aO88379 1555 aa17.81■□□□□ 0.44
Ncstn-201ENSMUST00000003550 Trim41Q5NCC3 630 aa17.77■□□□□ 0.44
Ncstn-201ENSMUST00000003550 Kdm5dQ62240 1548 aa17.75■□□□□ 0.43
Ncstn-201ENSMUST00000003550 Pcgf6Q99NA9 353 aa17.63■□□□□ 0.41
Ncstn-201ENSMUST00000003550 NacadQ5SWP3 1504 aa17.52■□□□□ 0.39
Ncstn-201ENSMUST00000003550 Cep164Q5DU05 1446 aa17.47■□□□□ 0.39
Ncstn-201ENSMUST00000003550 Smarca2Q6DIC0 1577 aa17.44■□□□□ 0.38
Ncstn-201ENSMUST00000003550 Crybg2B7ZCC2 1516 aa17.35■□□□□ 0.37
Ncstn-201ENSMUST00000003550 Supt5hO55201 1082 aaKnown RBP17.31■□□□□ 0.36
Ncstn-201ENSMUST00000003550 Chic1Q8CBW7 227 aa17.29■□□□□ 0.36
Ncstn-201ENSMUST00000003550 Cngb1E1AZ71 1325 aa17.26■□□□□ 0.35
Ncstn-201ENSMUST00000003550 Gab3Q8BSM5 595 aa17.25■□□□□ 0.35
Ncstn-201ENSMUST00000003550 Rsf1E9PWW9 1441 aaKnown RBP17.24■□□□□ 0.35
Ncstn-201ENSMUST00000003550 Sycp2Q9CUU3 1500 aa17.15■□□□□ 0.34
Ncstn-201ENSMUST00000003550 Ccdc88bQ4QRL3 1481 aa17.1■□□□□ 0.33
Ncstn-201ENSMUST00000003550 Cecr2E9Q2Z1 1453 aa17.07■□□□□ 0.32
Ncstn-201ENSMUST00000003550 Brd4Q9ESU6 1400 aaKnown RBP17.06■□□□□ 0.32
Ncstn-201ENSMUST00000003550 Zeb1Q64318 1117 aa17.04■□□□□ 0.32
Ncstn-201ENSMUST00000003550 Mier1Q5UAK0 511 aa17■□□□□ 0.31
Ncstn-201ENSMUST00000003550 Golga3P55937 1487 aa16.99■□□□□ 0.31
Ncstn-201ENSMUST00000003550 Neurod1Q60867 357 aa16.96■□□□□ 0.3
Ncstn-201ENSMUST00000003550 Synj1Q8CHC4 1574 aa16.93■□□□□ 0.3
Ncstn-201ENSMUST00000003550 NefmP08553 848 aa16.92■□□□□ 0.3
Ncstn-201ENSMUST00000003550 Esf1Q3V1V3 845 aaKnown RBP16.86■□□□□ 0.29
Ncstn-201ENSMUST00000003550 Sall2Q9QX96 1004 aa16.82■□□□□ 0.28
Ncstn-201ENSMUST00000003550 CftrP26361 1476 aa16.79■□□□□ 0.28
Ncstn-201ENSMUST00000003550 BicraF8VPZ9 1578 aa16.77■□□□□ 0.28
Ncstn-201ENSMUST00000003550 Top2bQ64511 1612 aa16.71■□□□□ 0.27
Ncstn-201ENSMUST00000003550 UbtfP25976 765 aaKnown RBP16.7■□□□□ 0.26
Ncstn-201ENSMUST00000003550 Cc2d2aQ8CFW7 1633 aa16.6■□□□□ 0.25
Ncstn-201ENSMUST00000003550 Cttnbp2B9EJA2 1648 aa16.59■□□□□ 0.25
Ncstn-201ENSMUST00000003550 Aebp2Q9Z248 504 aaKnown RBP16.58■□□□□ 0.24
Ncstn-201ENSMUST00000003550 Rapgef2Q8CHG7 1496 aa16.58■□□□□ 0.24
Ncstn-201ENSMUST00000003550 Wdr66E9Q743 1299 aa16.54■□□□□ 0.24
Ncstn-201ENSMUST00000003550 Myt1lP97500 1187 aa16.54■□□□□ 0.24
Ncstn-201ENSMUST00000003550 Las1lA2BE28 776 aaKnown RBP16.5■□□□□ 0.23
Ncstn-201ENSMUST00000003550 Cep162Q6ZQ06 1403 aa16.47■□□□□ 0.23
Ncstn-201ENSMUST00000003550 Anks4bQ8K3X6 423 aa16.46■□□□□ 0.23
Ncstn-201ENSMUST00000003550 Fmn1Q05860 1466 aa16.46■□□□□ 0.23
Ncstn-201ENSMUST00000003550 Ppargc1bQ8VHJ7 1014 aa16.46■□□□□ 0.22
Ncstn-201ENSMUST00000003550 Smarca4Q3TKT4 1613 aaKnown RBP16.45■□□□□ 0.22
Ncstn-201ENSMUST00000003550 Top2aQ01320 1528 aaKnown RBP16.45■□□□□ 0.22
Ncstn-201ENSMUST00000003550 Csrnp3P59055 597 aa16.4■□□□□ 0.22
Ncstn-201ENSMUST00000003550 Npm2Q80W85 207 aa16.38■□□□□ 0.21
Ncstn-201ENSMUST00000003550 ClspnQ80YR7 1315 aa16.38■□□□□ 0.21
Ncstn-201ENSMUST00000003550 1700123L14RikQ3V2K7 440 aa16.36■□□□□ 0.21
Ncstn-201ENSMUST00000003550 Plekhg3Q4VAC9 1341 aa16.35■□□□□ 0.21
Ncstn-201ENSMUST00000003550 Nop58Q6DFW4 536 aaKnown RBP16.32■□□□□ 0.2
Ncstn-201ENSMUST00000003550 Cdk11bP24788 784 aaKnown RBP16.32■□□□□ 0.2
Ncstn-201ENSMUST00000003550 TonslQ6NZL6 1363 aa16.31■□□□□ 0.2
Ncstn-201ENSMUST00000003550 Clip1Q922J3 1391 aa16.31■□□□□ 0.2
Ncstn-201ENSMUST00000003550 Iqgap2Q3UQ44 1575 aa16.23■□□□□ 0.19
Ncstn-201ENSMUST00000003550 Eif4g1Q6NZJ6 1600 aaKnown RBP16.21■□□□□ 0.19
Ncstn-201ENSMUST00000003550 Ncapd3Q6ZQK0 1506 aa16.2■□□□□ 0.18
Ncstn-201ENSMUST00000003550 Arhgap35Q91YM2 1499 aa16.11■□□□□ 0.17
Ncstn-201ENSMUST00000003550 Ap3b1Q9Z1T1 1105 aa16.11■□□□□ 0.17
Ncstn-201ENSMUST00000003550 PtprkP35822 1457 aa16.1■□□□□ 0.17
Ncstn-201ENSMUST00000003550 Eid3Q3V124 375 aa16.1■□□□□ 0.17
Ncstn-201ENSMUST00000003550 Arap1Q4LDD4 1452 aa16.07■□□□□ 0.16
Ncstn-201ENSMUST00000003550 Aplp2Q06335 707 aa16.06■□□□□ 0.16
Ncstn-201ENSMUST00000003550 Atad2bE9Q166 1460 aaKnown RBP16.06■□□□□ 0.16
Ncstn-201ENSMUST00000003550 TnnQ80Z71 1560 aa16.05■□□□□ 0.16
Ncstn-201ENSMUST00000003550 Gm38655A0A286YDK6 273 aa16.05■□□□□ 0.16
Ncstn-201ENSMUST00000003550 Il27Q8K3I6 234 aa16.05■□□□□ 0.16
Ncstn-201ENSMUST00000003550 Eea1Q8BL66 1411 aa16.04■□□□□ 0.16
Ncstn-201ENSMUST00000003550 NrkQ9R0G8 1455 aa15.99■□□□□ 0.15
Ncstn-201ENSMUST00000003550 Setd5Q5XJV7 1441 aa15.99■□□□□ 0.15
Ncstn-201ENSMUST00000003550 Kdm5bQ80Y84 1544 aa15.98■□□□□ 0.15
Ncstn-201ENSMUST00000003550 Arhgef5E9Q7D5 1581 aa15.96■□□□□ 0.15
Ncstn-201ENSMUST00000003550 Ccdc18Q640L5 1455 aa15.92■□□□□ 0.14
Ncstn-201ENSMUST00000003550 Frmpd1A2AKB4 1549 aa15.91■□□□□ 0.14
Ncstn-201ENSMUST00000003550 CenpbP27790 599 aa15.91■□□□□ 0.14
Ncstn-201ENSMUST00000003550 Pds5bQ4VA53 1446 aaKnown RBP15.9■□□□□ 0.14
Ncstn-201ENSMUST00000003550 Kif15Q6P9L6 1387 aa15.89■□□□□ 0.13
Ncstn-201ENSMUST00000003550 Shroom4Q1W617 1475 aa15.89■□□□□ 0.13
Ncstn-201ENSMUST00000003550 Mapk8ip2Q9ERE9 830 aa15.88■□□□□ 0.13
Ncstn-201ENSMUST00000003550 Lamc3Q9R0B6 1581 aa15.87■□□□□ 0.13
Ncstn-201ENSMUST00000003550 AqrQ8CFQ3 1481 aaKnown RBP15.85■□□□□ 0.13
Ncstn-201ENSMUST00000003550 BlmO88700 1416 aa15.85■□□□□ 0.13
Ncstn-201ENSMUST00000003550 Wdr62Q3U3T8 1523 aa15.84■□□□□ 0.13
Ncstn-201ENSMUST00000003550 Hnrnpul2Q00PI9 745 aaKnown RBP15.84■□□□□ 0.13
Ncstn-201ENSMUST00000003550 Baz1bQ9Z277 1479 aa15.84■□□□□ 0.13
Ncstn-201ENSMUST00000003550 Tiam1Q60610 1591 aa15.84■□□□□ 0.13
Ncstn-201ENSMUST00000003550 Map3k1P53349 1493 aa15.83■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms