RNA–Protein interactions for RNA: ENSMUST00000001706.6

Hoxc9-201, Transcript of Homeobox protein Hox-C9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc9, Length 2,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9-201ENSMUST00000001706 Gm35339A0A140LHH9 1649 aa31.73■■■□□ 2.67
Hoxc9-201ENSMUST00000001706 NischQ80TM9 1593 aa31.72■■■□□ 2.67
Hoxc9-201ENSMUST00000001706 Abcc9P70170 1546 aa30.88■■■□□ 2.53
Hoxc9-201ENSMUST00000001706 Abcc8B2RUS7 1588 aa30.35■■■□□ 2.45
Hoxc9-201ENSMUST00000001706 Rtl1Q7M732 1744 aa30.09■■■□□ 2.41
Hoxc9-201ENSMUST00000001706 Rpgrip1Q9EPQ2 1331 aa30.03■■■□□ 2.4
Hoxc9-201ENSMUST00000001706 Ccdc180J3QNE4 1664 aa29.7■■■□□ 2.35
Hoxc9-201ENSMUST00000001706 Rhox8Q6VSS7 320 aa29.34■■■□□ 2.29
Hoxc9-201ENSMUST00000001706 Acin1Q9JIX8 1338 aaKnown RBP28.95■■■□□ 2.22
Hoxc9-201ENSMUST00000001706 Zcchc6Q5BLK4 1491 aaKnown RBP28.62■■■□□ 2.17
Hoxc9-201ENSMUST00000001706 ScribQ80U72 1612 aa28.58■■■□□ 2.16
Hoxc9-201ENSMUST00000001706 Dcaf1Q80TR8 1506 aa28.38■■■□□ 2.13
Hoxc9-201ENSMUST00000001706 Pcgf6Q99NA9 353 aa28.23■■■□□ 2.11
Hoxc9-201ENSMUST00000001706 HrcG5E8J6 738 aa28.17■■■□□ 2.1
Hoxc9-201ENSMUST00000001706 Kdm5dQ62240 1548 aa27.9■■■□□ 2.06
Hoxc9-201ENSMUST00000001706 Ehmt2Q9Z148 1263 aaKnown RBP27.86■■■□□ 2.05
Hoxc9-201ENSMUST00000001706 NacadQ5SWP3 1504 aa27.81■■■□□ 2.04
Hoxc9-201ENSMUST00000001706 Rb1cc1Q9ESK9 1588 aa27.75■■■□□ 2.03
Hoxc9-201ENSMUST00000001706 Trim41Q5NCC3 630 aa27.64■■■□□ 2.02
Hoxc9-201ENSMUST00000001706 Baz1aO88379 1555 aa27.47■■□□□ 1.99
Hoxc9-201ENSMUST00000001706 Supt5hO55201 1082 aaKnown RBP27.4■■□□□ 1.98
Hoxc9-201ENSMUST00000001706 Crybg2B7ZCC2 1516 aa27.22■■□□□ 1.95
Hoxc9-201ENSMUST00000001706 Sycp2Q9CUU3 1500 aa27.22■■□□□ 1.95
Hoxc9-201ENSMUST00000001706 Neurod1Q60867 357 aa27.16■■□□□ 1.94
Hoxc9-201ENSMUST00000001706 Las1lA2BE28 776 aaKnown RBP27.12■■□□□ 1.93
Hoxc9-201ENSMUST00000001706 Ccdc136Q3TVA9 1136 aa27.06■■□□□ 1.92
Hoxc9-201ENSMUST00000001706 Cep164Q5DU05 1446 aa26.99■■□□□ 1.91
Hoxc9-201ENSMUST00000001706 Smarca2Q6DIC0 1577 aa26.81■■□□□ 1.88
Hoxc9-201ENSMUST00000001706 NefmP08553 848 aa26.77■■□□□ 1.88
Hoxc9-201ENSMUST00000001706 BicraF8VPZ9 1578 aa26.64■■□□□ 1.86
Hoxc9-201ENSMUST00000001706 Anks4bQ8K3X6 423 aa26.6■■□□□ 1.85
Hoxc9-201ENSMUST00000001706 Zeb1Q64318 1117 aa26.56■■□□□ 1.84
Hoxc9-201ENSMUST00000001706 Cngb1E1AZ71 1325 aa26.51■■□□□ 1.83
Hoxc9-201ENSMUST00000001706 Myt1Q8CFC2 1127 aa26.5■■□□□ 1.83
Hoxc9-201ENSMUST00000001706 1700123L14RikQ3V2K7 440 aa26.47■■□□□ 1.83
Hoxc9-201ENSMUST00000001706 Sall2Q9QX96 1004 aa26.46■■□□□ 1.83
Hoxc9-201ENSMUST00000001706 Mier1Q5UAK0 511 aa26.35■■□□□ 1.81
Hoxc9-201ENSMUST00000001706 Csrnp3P59055 597 aa26.24■■□□□ 1.79
Hoxc9-201ENSMUST00000001706 CenpbP27790 599 aa26.22■■□□□ 1.79
Hoxc9-201ENSMUST00000001706 Aplp2Q06335 707 aa26.19■■□□□ 1.78
Hoxc9-201ENSMUST00000001706 Rsf1E9PWW9 1441 aaKnown RBP26.16■■□□□ 1.78
Hoxc9-201ENSMUST00000001706 Cecr2E9Q2Z1 1453 aa26.14■■□□□ 1.78
Hoxc9-201ENSMUST00000001706 Brd4Q9ESU6 1400 aaKnown RBP26.07■■□□□ 1.76
Hoxc9-201ENSMUST00000001706 Chic1Q8CBW7 227 aa26.04■■□□□ 1.76
Hoxc9-201ENSMUST00000001706 Cdk11bP24788 784 aaKnown RBP25.98■■□□□ 1.75
Hoxc9-201ENSMUST00000001706 Gab3Q8BSM5 595 aa25.97■■□□□ 1.75
Hoxc9-201ENSMUST00000001706 Smarca4Q3TKT4 1613 aaKnown RBP25.91■■□□□ 1.74
Hoxc9-201ENSMUST00000001706 ClspnQ80YR7 1315 aa25.89■■□□□ 1.74
Hoxc9-201ENSMUST00000001706 Nop58Q6DFW4 536 aaKnown RBP25.88■■□□□ 1.73
Hoxc9-201ENSMUST00000001706 Synj1Q8CHC4 1574 aa25.88■■□□□ 1.73
Hoxc9-201ENSMUST00000001706 Ccdc88bQ4QRL3 1481 aa25.82■■□□□ 1.72
Hoxc9-201ENSMUST00000001706 Wdr66E9Q743 1299 aa25.81■■□□□ 1.72
Hoxc9-201ENSMUST00000001706 CftrP26361 1476 aa25.81■■□□□ 1.72
Hoxc9-201ENSMUST00000001706 Aebp2Q9Z248 504 aaKnown RBP25.79■■□□□ 1.72
Hoxc9-201ENSMUST00000001706 Cttnbp2B9EJA2 1648 aa25.79■■□□□ 1.72
Hoxc9-201ENSMUST00000001706 Golga3P55937 1487 aa25.78■■□□□ 1.72
Hoxc9-201ENSMUST00000001706 Atad2bE9Q166 1460 aaKnown RBP25.63■■□□□ 1.69
Hoxc9-201ENSMUST00000001706 Pds5bQ4VA53 1446 aaKnown RBP25.62■■□□□ 1.69
Hoxc9-201ENSMUST00000001706 Iqgap2Q3UQ44 1575 aa25.59■■□□□ 1.69
Hoxc9-201ENSMUST00000001706 UbtfP25976 765 aaKnown RBP25.48■■□□□ 1.67
Hoxc9-201ENSMUST00000001706 Top2bQ64511 1612 aa25.46■■□□□ 1.67
Hoxc9-201ENSMUST00000001706 TonslQ6NZL6 1363 aa25.43■■□□□ 1.66
Hoxc9-201ENSMUST00000001706 Rapgef2Q8CHG7 1496 aa25.35■■□□□ 1.65
Hoxc9-201ENSMUST00000001706 DiexfQ8BTT6 772 aaKnown RBP25.34■■□□□ 1.65
Hoxc9-201ENSMUST00000001706 Tnnt3Q9QZ47 272 aa25.29■■□□□ 1.64
Hoxc9-201ENSMUST00000001706 Gm38655A0A286YDK6 273 aa25.27■■□□□ 1.64
Hoxc9-201ENSMUST00000001706 Esf1Q3V1V3 845 aaKnown RBP25.24■■□□□ 1.63
Hoxc9-201ENSMUST00000001706 Wdr62Q3U3T8 1523 aa25.2■■□□□ 1.62
Hoxc9-201ENSMUST00000001706 Ppargc1bQ8VHJ7 1014 aa25.2■■□□□ 1.62
Hoxc9-201ENSMUST00000001706 Frmpd1A2AKB4 1549 aa25.13■■□□□ 1.61
Hoxc9-201ENSMUST00000001706 Bcl11aQ9QYE3 773 aa25.12■■□□□ 1.61
Hoxc9-201ENSMUST00000001706 Fam71e1A1L3C1 212 aa25.11■■□□□ 1.61
Hoxc9-201ENSMUST00000001706 Ercc6F8VPZ5 1481 aa25.1■■□□□ 1.61
Hoxc9-201ENSMUST00000001706 Cc2d2aQ8CFW7 1633 aa25.1■■□□□ 1.61
Hoxc9-201ENSMUST00000001706 Cep162Q6ZQ06 1403 aa25.07■■□□□ 1.6
Hoxc9-201ENSMUST00000001706 Fmn1Q05860 1466 aa25.07■■□□□ 1.6
Hoxc9-201ENSMUST00000001706 Ncapd3Q6ZQK0 1506 aa25.06■■□□□ 1.6
Hoxc9-201ENSMUST00000001706 Thoc2B1AZI6 1594 aaKnown RBP25.01■■□□□ 1.6
Hoxc9-201ENSMUST00000001706 Hnrnpul2Q00PI9 745 aaKnown RBP25.01■■□□□ 1.59
Hoxc9-201ENSMUST00000001706 Top2aQ01320 1528 aaKnown RBP24.98■■□□□ 1.59
Hoxc9-201ENSMUST00000001706 TnnQ80Z71 1560 aa24.93■■□□□ 1.58
Hoxc9-201ENSMUST00000001706 SafbD3YXK2 937 aaKnown RBP24.89■■□□□ 1.57
Hoxc9-201ENSMUST00000001706 Unc13aQ4KUS2 1712 aa24.87■■□□□ 1.57
Hoxc9-201ENSMUST00000001706 Clip1Q922J3 1391 aa24.85■■□□□ 1.57
Hoxc9-201ENSMUST00000001706 Anp32aO35381 247 aa24.83■■□□□ 1.57
Hoxc9-201ENSMUST00000001706 Rtl5Q5DTT4 599 aa24.82■■□□□ 1.56
Hoxc9-201ENSMUST00000001706 Lamc3Q9R0B6 1581 aa24.82■■□□□ 1.56
Hoxc9-201ENSMUST00000001706 Mapk8ip2Q9ERE9 830 aa24.81■■□□□ 1.56
Hoxc9-201ENSMUST00000001706 Myt1lP97500 1187 aa24.8■■□□□ 1.56
Hoxc9-201ENSMUST00000001706 Eif4g1Q6NZJ6 1600 aaKnown RBP24.78■■□□□ 1.56
Hoxc9-201ENSMUST00000001706 Stra8P70278 393 aa24.76■■□□□ 1.55
Hoxc9-201ENSMUST00000001706 Kdm5bQ80Y84 1544 aa24.74■■□□□ 1.55
Hoxc9-201ENSMUST00000001706 Plekhg3Q4VAC9 1341 aa24.7■■□□□ 1.55
Hoxc9-201ENSMUST00000001706 Fam135aQ6NS59 1506 aa24.69■■□□□ 1.54
Hoxc9-201ENSMUST00000001706 Phldb1Q6PDH0 1371 aaKnown RBP24.69■■□□□ 1.54
Hoxc9-201ENSMUST00000001706 Znf710Q3U288 666 aa24.68■■□□□ 1.54
Hoxc9-201ENSMUST00000001706 Ap3b1Q9Z1T1 1105 aa24.62■■□□□ 1.53
Hoxc9-201ENSMUST00000001706 Rpap1Q80TE0 1409 aa24.59■■□□□ 1.53
Hoxc9-201ENSMUST00000001706 Npm2Q80W85 207 aa24.58■■□□□ 1.53
Hoxc9-201ENSMUST00000001706 Kif15Q6P9L6 1387 aa24.56■■□□□ 1.52
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms