RNA–Protein interactions for RNA: ENSMUST00000000964.5

Hoxa1-201, Transcript of Homeobox protein Hox-A1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxa1, Length 2,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1-201ENSMUST00000000964 Gm35339A0A140LHH9 1649 aa20.9■□□□□ 0.94
Hoxa1-201ENSMUST00000000964 NischQ80TM9 1593 aa20.32■□□□□ 0.84
Hoxa1-201ENSMUST00000000964 Abcc8B2RUS7 1588 aa19.85■□□□□ 0.77
Hoxa1-201ENSMUST00000000964 Abcc9P70170 1546 aa19.81■□□□□ 0.76
Hoxa1-201ENSMUST00000000964 ScribQ80U72 1612 aa19.38■□□□□ 0.69
Hoxa1-201ENSMUST00000000964 NacadQ5SWP3 1504 aa18.76■□□□□ 0.59
Hoxa1-201ENSMUST00000000964 Kdm5dQ62240 1548 aa18.63■□□□□ 0.57
Hoxa1-201ENSMUST00000000964 Sycp2Q9CUU3 1500 aa18.41■□□□□ 0.54
Hoxa1-201ENSMUST00000000964 DiexfQ8BTT6 772 aaKnown RBP18.35■□□□□ 0.53
Hoxa1-201ENSMUST00000000964 Dnajc5bQ9CQ94 199 aa18.35■□□□□ 0.53
Hoxa1-201ENSMUST00000000964 Dcaf1Q80TR8 1506 aa18.22■□□□□ 0.51
Hoxa1-201ENSMUST00000000964 BicraF8VPZ9 1578 aa18.21■□□□□ 0.51
Hoxa1-201ENSMUST00000000964 Thoc2B1AZI6 1594 aaKnown RBP17.87■□□□□ 0.45
Hoxa1-201ENSMUST00000000964 Pds5bQ4VA53 1446 aaKnown RBP17.85■□□□□ 0.45
Hoxa1-201ENSMUST00000000964 Myt1Q8CFC2 1127 aa17.77■□□□□ 0.44
Hoxa1-201ENSMUST00000000964 Rhox8Q6VSS7 320 aa17.69■□□□□ 0.42
Hoxa1-201ENSMUST00000000964 Rb1cc1Q9ESK9 1588 aa17.64■□□□□ 0.42
Hoxa1-201ENSMUST00000000964 CatipB9EKE5 520 aa17.59■□□□□ 0.41
Hoxa1-201ENSMUST00000000964 Atad2bE9Q166 1460 aaKnown RBP17.58■□□□□ 0.4
Hoxa1-201ENSMUST00000000964 Crybg2B7ZCC2 1516 aa17.53■□□□□ 0.4
Hoxa1-201ENSMUST00000000964 Amer1Q7TS75 1132 aa17.52■□□□□ 0.4
Hoxa1-201ENSMUST00000000964 Pcgf6Q99NA9 353 aa17.52■□□□□ 0.4
Hoxa1-201ENSMUST00000000964 Ube2uB1AUC4 352 aa17.51■□□□□ 0.39
Hoxa1-201ENSMUST00000000964 Cc2d2aQ8CFW7 1633 aa17.48■□□□□ 0.39
Hoxa1-201ENSMUST00000000964 Rpgrip1Q9EPQ2 1331 aa17.42■□□□□ 0.38
Hoxa1-201ENSMUST00000000964 Baz1aO88379 1555 aa17.41■□□□□ 0.38
Hoxa1-201ENSMUST00000000964 Ccdc180J3QNE4 1664 aa17.4■□□□□ 0.38
Hoxa1-201ENSMUST00000000964 Ercc6F8VPZ5 1481 aa17.39■□□□□ 0.37
Hoxa1-201ENSMUST00000000964 Fam135aQ6NS59 1506 aa17.38■□□□□ 0.37
Hoxa1-201ENSMUST00000000964 Bcl11aQ9QYE3 773 aa17.33■□□□□ 0.37
Hoxa1-201ENSMUST00000000964 CenpbP27790 599 aa17.31■□□□□ 0.36
Hoxa1-201ENSMUST00000000964 Baz1bQ9Z277 1479 aa17.3■□□□□ 0.36
Hoxa1-201ENSMUST00000000964 Smarca2Q6DIC0 1577 aa17.28■□□□□ 0.36
Hoxa1-201ENSMUST00000000964 Ttbk1Q6PCN3 1308 aa17.27■□□□□ 0.35
Hoxa1-201ENSMUST00000000964 Plppr3Q7TPB0 716 aa17.24■□□□□ 0.35
Hoxa1-201ENSMUST00000000964 Smarca4Q3TKT4 1613 aaKnown RBP17.19■□□□□ 0.34
Hoxa1-201ENSMUST00000000964 Dnajc5P60904 198 aa17.19■□□□□ 0.34
Hoxa1-201ENSMUST00000000964 Iqgap2Q3UQ44 1575 aa17.15■□□□□ 0.34
Hoxa1-201ENSMUST00000000964 Zcchc6Q5BLK4 1491 aaKnown RBP17.14■□□□□ 0.34
Hoxa1-201ENSMUST00000000964 Phldb1Q6PDH0 1371 aaKnown RBP17.13■□□□□ 0.33
Hoxa1-201ENSMUST00000000964 Wdr62Q3U3T8 1523 aa17.12■□□□□ 0.33
Hoxa1-201ENSMUST00000000964 Frmpd1A2AKB4 1549 aa17.08■□□□□ 0.33
Hoxa1-201ENSMUST00000000964 Cecr2E9Q2Z1 1453 aa16.97■□□□□ 0.31
Hoxa1-201ENSMUST00000000964 PrkcshO08795 521 aa16.93■□□□□ 0.3
Hoxa1-201ENSMUST00000000964 Mrc2Q64449 1479 aa16.92■□□□□ 0.3
Hoxa1-201ENSMUST00000000964 Ubl4bQ9CQ84 188 aa16.92■□□□□ 0.3
Hoxa1-201ENSMUST00000000964 Las1lA2BE28 776 aaKnown RBP16.84■□□□□ 0.29
Hoxa1-201ENSMUST00000000964 Unc13aQ4KUS2 1712 aa16.76■□□□□ 0.27
Hoxa1-201ENSMUST00000000964 Trim41Q5NCC3 630 aa16.71■□□□□ 0.27
Hoxa1-201ENSMUST00000000964 Rsf1E9PWW9 1441 aaKnown RBP16.56■□□□□ 0.24
Hoxa1-201ENSMUST00000000964 ArxO35085 564 aa16.54■□□□□ 0.24
Hoxa1-201ENSMUST00000000964 Lrriq1Q0P5X1 1673 aa16.54■□□□□ 0.24
Hoxa1-201ENSMUST00000000964 CftrP26361 1476 aa16.53■□□□□ 0.24
Hoxa1-201ENSMUST00000000964 Cttnbp2B9EJA2 1648 aa16.5■□□□□ 0.23
Hoxa1-201ENSMUST00000000964 Shroom2A2ALU4 1481 aa16.49■□□□□ 0.23
Hoxa1-201ENSMUST00000000964 Aplp2Q06335 707 aa16.46■□□□□ 0.23
Hoxa1-201ENSMUST00000000964 Gtf3c5Q8R2T8 520 aa16.44■□□□□ 0.22
Hoxa1-201ENSMUST00000000964 1700123L14RikQ3V2K7 440 aa16.42■□□□□ 0.22
Hoxa1-201ENSMUST00000000964 Synj1Q8CHC4 1574 aa16.4■□□□□ 0.22
Hoxa1-201ENSMUST00000000964 Cux2P70298 1426 aa16.38■□□□□ 0.21
Hoxa1-201ENSMUST00000000964 Eif4g3Q80XI3 1579 aaKnown RBP16.35■□□□□ 0.21
Hoxa1-201ENSMUST00000000964 Brd4Q9ESU6 1400 aaKnown RBP16.34■□□□□ 0.21
Hoxa1-201ENSMUST00000000964 BccipQ9CWI3 316 aa16.33■□□□□ 0.2
Hoxa1-201ENSMUST00000000964 Col17a1Q07563 1470 aa16.33■□□□□ 0.2
Hoxa1-201ENSMUST00000000964 Pknox2Q8BG99 474 aa16.33■□□□□ 0.2
Hoxa1-201ENSMUST00000000964 Kif21aQ9QXL2 1672 aa16.32■□□□□ 0.2
Hoxa1-201ENSMUST00000000964 Kif15Q6P9L6 1387 aa16.26■□□□□ 0.19
Hoxa1-201ENSMUST00000000964 Neurod1Q60867 357 aa16.21■□□□□ 0.19
Hoxa1-201ENSMUST00000000964 Lamc3Q9R0B6 1581 aa16.18■□□□□ 0.18
Hoxa1-201ENSMUST00000000964 Pabpn1Q8CCS6 302 aaKnown RBP16.16■□□□□ 0.18
Hoxa1-201ENSMUST00000000964 Fgd1P52734 960 aa16.14■□□□□ 0.17
Hoxa1-201ENSMUST00000000964 Npm1Q61937 292 aaKnown RBP16.14■□□□□ 0.17
Hoxa1-201ENSMUST00000000964 TimelessQ9R1X4 1197 aa16.13■□□□□ 0.17
Hoxa1-201ENSMUST00000000964 Top2bQ64511 1612 aa16.13■□□□□ 0.17
Hoxa1-201ENSMUST00000000964 Cep164Q5DU05 1446 aa16.11■□□□□ 0.17
Hoxa1-201ENSMUST00000000964 Urb2E9Q7L1 1524 aaKnown RBP16.11■□□□□ 0.17
Hoxa1-201ENSMUST00000000964 NrdcQ8BHG1 1161 aa16.1■□□□□ 0.17
Hoxa1-201ENSMUST00000000964 Zcchc11B2RX14 1644 aaKnown RBP16.06■□□□□ 0.16
Hoxa1-201ENSMUST00000000964 Esf1Q3V1V3 845 aaKnown RBP16.05■□□□□ 0.16
Hoxa1-201ENSMUST00000000964 Plb1Q3TTY0 1478 aa16.04■□□□□ 0.16
Hoxa1-201ENSMUST00000000964 Rtl1Q7M732 1744 aa16.04■□□□□ 0.16
Hoxa1-201ENSMUST00000000964 Dhx29Q6PGC1 1365 aaKnown RBP16.01■□□□□ 0.15
Hoxa1-201ENSMUST00000000964 Gm38655A0A286YDK6 273 aa16.01■□□□□ 0.15
Hoxa1-201ENSMUST00000000964 Eif5bQ05D44 1216 aaKnown RBP15.97■□□□□ 0.15
Hoxa1-201ENSMUST00000000964 Rsph4aQ8BYM7 716 aa15.97■□□□□ 0.15
Hoxa1-201ENSMUST00000000964 Acin1Q9JIX8 1338 aaKnown RBP15.95■□□□□ 0.14
Hoxa1-201ENSMUST00000000964 Rusc2Q80U22 1514 aa15.95■□□□□ 0.14
Hoxa1-201ENSMUST00000000964 Ift140E9PY46 1464 aa15.93■□□□□ 0.14
Hoxa1-201ENSMUST00000000964 HrcG5E8J6 738 aa15.92■□□□□ 0.14
Hoxa1-201ENSMUST00000000964 Anks4bQ8K3X6 423 aa15.92■□□□□ 0.14
Hoxa1-201ENSMUST00000000964 LrpprcQ6PB66 1392 aaKnown RBP15.92■□□□□ 0.14
Hoxa1-201ENSMUST00000000964 Ccdc136Q3TVA9 1136 aa15.91■□□□□ 0.14
Hoxa1-201ENSMUST00000000964 Crocc2F6XLV1 1638 aa15.9■□□□□ 0.14
Hoxa1-201ENSMUST00000000964 Cdk11bP24788 784 aaKnown RBP15.89■□□□□ 0.13
Hoxa1-201ENSMUST00000000964 Scaf1Q5U4C3 1256 aaKnown RBP15.89■□□□□ 0.13
Hoxa1-201ENSMUST00000000964 Ccdc18Q640L5 1455 aa15.89■□□□□ 0.13
Hoxa1-201ENSMUST00000000964 Ifnlr1Q8CGK5 535 aa15.88■□□□□ 0.13
Hoxa1-201ENSMUST00000000964 Ehmt2Q9Z148 1263 aaKnown RBP15.87■□□□□ 0.13
Hoxa1-201ENSMUST00000000964 Pelp1Q9DBD5 1123 aaKnown RBP15.87■□□□□ 0.13
Hoxa1-201ENSMUST00000000964 TnnQ80Z71 1560 aa15.85■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms