RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 RPS3P23396 243 aaKnown RBP eCLIP17.66■□□□□ 0.424e-8■■■■□ 20.9
VPS72-207ENST00000640458 ACADLP28330 430 aa17.66■□□□□ 0.42
VPS72-207ENST00000640458 CCR7P32248 378 aa17.66■□□□□ 0.42
VPS72-207ENST00000640458 DLSTP36957 453 aa17.66■□□□□ 0.42
VPS72-207ENST00000640458 DCTP40126 519 aa17.66■□□□□ 0.42
VPS72-207ENST00000640458 BOP1Q14137 746 aaKnown RBP17.66■□□□□ 0.42
VPS72-207ENST00000640458 TYSND1Q2T9J0 566 aa17.66■□□□□ 0.42
VPS72-207ENST00000640458 AGGF1Q8N302 714 aaeCLIP17.66■□□□□ 0.42
VPS72-207ENST00000640458 ACVR1CQ8NER5 493 aa17.66■□□□□ 0.42
VPS72-207ENST00000640458 ZNF669Q96BR6 464 aaPredicted RBP17.66■□□□□ 0.42
VPS72-207ENST00000640458 TRIM56Q9BRZ2 755 aaKnown RBP17.66■□□□□ 0.42
VPS72-207ENST00000640458 ZNF768Q9H5H4 540 aaKnown RBP17.66■□□□□ 0.42
VPS72-207ENST00000640458 ZCWPW2A0A1B0GU75 182 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 CDC14CA4D256 554 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 IQCF5A8MTL0 148 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 BHMG1C9JSJ3 638 aaPredicted RBP17.65■□□□□ 0.42
VPS72-207ENST00000640458 GOLGA8KD6RF30 607 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 GOLGA8TH3BQL2 631 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 PFDN6O15212 129 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 KATNA1O75449 491 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 USP1O94782 785 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 OGNP20774 298 aaKnown RBP17.65■□□□□ 0.42
VPS72-207ENST00000640458 BRD3Q15059 726 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 SYTL3Q4VX76 610 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 TEX35Q5T0J7 233 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 RNF187Q5TA31 235 aaPredicted RBP17.65■□□□□ 0.42
VPS72-207ENST00000640458 IZUMO3Q5VZ72 239 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 PTRHD1Q6GMV3 140 aaKnown RBP17.65■□□□□ 0.42
VPS72-207ENST00000640458 NEPROQ6NW34 567 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 IRGCQ6NXR0 463 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 NAPRTQ6XQN6 538 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 MAMDC2Q7Z304 686 aaPredicted RBP17.65■□□□□ 0.42
VPS72-207ENST00000640458 OOSP2Q86WS3 158 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 OTUD6BQ8N6M0 293 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 PHC3Q8NDX5 983 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 LKAAEAR1Q8TD35 194 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 KLHL6Q8WZ60 621 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 UBXN4Q92575 508 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 TFB2MQ9H5Q4 396 aaKnown RBP17.65■□□□□ 0.42
VPS72-207ENST00000640458 HRASLS2Q9NWW9 162 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 SEMA5BQ9P283 1151 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 GNPTGQ9UJJ9 305 aa17.65■□□□□ 0.42
VPS72-207ENST00000640458 TTI1O43156 1089 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 KIF1CO43896 1103 aaKnown RBP17.64■□□□□ 0.41
VPS72-207ENST00000640458 GPC4O75487 556 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 DDAH2O95865 285 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 PPP1CAP62136 330 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 CACHD1Q5VU97 1274 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 FAM92BQ6ZTR7 304 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 KRT222Q8N1A0 295 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 OR4E2Q8NGC2 313 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 ASZ1Q8WWH4 475 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 LPGAT1Q92604 370 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 PANX3Q96QZ0 392 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 CD180Q99467 661 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 ULBP3Q9BZM4 244 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 SIDT1Q9NXL6 827 aaKnown RBP17.64■□□□□ 0.41
VPS72-207ENST00000640458 CROTQ9UKG9 612 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 CDYLQ9Y232 598 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 MAD1L1Q9Y6D9 718 aa17.64■□□□□ 0.41
VPS72-207ENST00000640458 OR6C74A6NCV1 312 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 SMAPO00193 183 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 RAD51CO43502 376 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 RASSF9O75901 435 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 AOAHP28039 575 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 PMS2P54278 862 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 ADARP55265 1226 aaKnown RBP17.63■□□□□ 0.41
VPS72-207ENST00000640458 HSPA14Q0VDF9 509 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 MAP7Q14244 749 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 MORF4L2Q15014 288 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 EIF2S3LQ2VIR3 472 aaKnown RBP17.63■□□□□ 0.41
VPS72-207ENST00000640458 C6orf15Q6UXA7 325 aaPredicted RBP17.63■□□□□ 0.41
VPS72-207ENST00000640458 CENPUQ71F23 418 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 CILP2Q8IUL8 1156 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 SRRM1Q8IYB3 904 aaKnown RBP17.63■□□□□ 0.41
VPS72-207ENST00000640458 TBC1D21Q8IYX1 336 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 SLC22A15Q8IZD6 547 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 BBOF1Q8ND07 529 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 OR52E1Q8NGJ3 308 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 LCN9Q8WX39 176 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 STAMBPL1Q96FJ0 436 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 BIRC8Q96P09 236 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 LRRC1Q9BTT6 524 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 ASF1AQ9Y294 204 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 MAP4K5Q9Y4K4 846 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 FAM169AQ9Y6X4 670 aa17.63■□□□□ 0.41
VPS72-207ENST00000640458 UBA6A0AVT1 1052 aaPredicted RBP17.62■□□□□ 0.41
VPS72-207ENST00000640458 H3BMM5 538 aa17.62■□□□□ 0.41
VPS72-207ENST00000640458 KPNA5O15131 536 aa17.62■□□□□ 0.41
VPS72-207ENST00000640458 DNAJB5O75953 348 aa17.62■□□□□ 0.41
VPS72-207ENST00000640458 SLCO2B1O94956 709 aa17.62■□□□□ 0.41
VPS72-207ENST00000640458 CLDN1O95832 211 aa17.62■□□□□ 0.41
VPS72-207ENST00000640458 ESR1P03372 595 aa17.62■□□□□ 0.41
VPS72-207ENST00000640458 APOA4P06727 396 aa17.62■□□□□ 0.41
VPS72-207ENST00000640458 TNFRSF8P28908 595 aa17.62■□□□□ 0.41
VPS72-207ENST00000640458 FMO4P31512 558 aa17.62■□□□□ 0.41
VPS72-207ENST00000640458 SEPHS1P49903 392 aa17.62■□□□□ 0.41
VPS72-207ENST00000640458 CSE1LP55060 971 aaKnown RBP17.62■□□□□ 0.41
VPS72-207ENST00000640458 EIF3BP55884 814 aaKnown RBP17.62■□□□□ 0.41
VPS72-207ENST00000640458 FOXM1Q08050 763 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms