RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CDH20Q9HBT6 801 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 DNAJC4Q9NNZ3 241 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 TBC1D7Q9P0N9 293 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.82□□□□□ -1.64
SYNE2-210ENST00000553455 TNFRSF18Q9Y5U5 241 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 DOCK7Q96N67 2140 aa4.82□□□□□ -1.64
SYNE2-210ENST00000553455 PSMD14O00487 310 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 HSPA8P11142 646 aaKnown RBP4.81□□□□□ -1.64
SYNE2-210ENST00000553455 MSH3P20585 1137 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 FMO5P49326 533 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 B3GALT5-AS1P59052 145 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 TUBB4BP68371 445 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 SCN1BQ07699 218 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 ZNF415Q09FC8 603 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 PHLDA2Q53GA4 152 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 LBHQ53QV2 105 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-210ENST00000553455 PDSS1Q5T2R2 415 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 FAM91A1Q658Y4 838 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 CORO6Q6QEF8 472 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 C11orf57Q6ZUT1 292 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-210ENST00000553455 ZNF771Q7L3S4 317 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-210ENST00000553455 PLD3Q8IV08 490 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 THAP8Q8NA92 274 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 OR2T12Q8NG77 320 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 VANGL1Q8TAA9 524 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-210ENST00000553455 C9orf43Q8TAL5 461 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-210ENST00000553455 GRHL3Q8TE85 626 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 SLC47A1Q96FL8 570 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 ZNF583Q96ND8 569 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 MYADMQ96S97 322 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 TRAF4Q9BUZ4 470 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-210ENST00000553455 Q9H8V8 135 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 XAB2Q9HCS7 855 aaKnown RBP4.81□□□□□ -1.64
SYNE2-210ENST00000553455 GKN1Q9NS71 199 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 DAPK2Q9UIK4 370 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 RASAL2Q9UJF2 1139 aa4.81□□□□□ -1.64
SYNE2-210ENST00000553455 C16orf97H3BN30 126 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 CAPN9O14815 690 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 SLU7O95391 586 aaKnown RBP4.8□□□□□ -1.64
SYNE2-210ENST00000553455 HSP90AB1P08238 724 aaKnown RBP4.8□□□□□ -1.64
SYNE2-210ENST00000553455 SUPT20HL2P0C7V6 817 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 PLA2G4BP0C869 781 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 SAGP10523 405 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-210ENST00000553455 EPCAMP16422 314 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 GNAZP19086 355 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 CASTP20810 708 aaKnown RBP4.8□□□□□ -1.64
SYNE2-210ENST00000553455 ACAT1P24752 427 aaKnown RBP4.8□□□□□ -1.64
SYNE2-210ENST00000553455 PSMA3P25788 255 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 COPB2P35606 906 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 HOXA1P49639 335 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-210ENST00000553455 GMPSP49915 693 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-210ENST00000553455 CLDN15P56746 228 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 PTENP60484 403 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 PTK6Q13882 451 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 ASIC2Q16515 512 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 UGT3A2Q3SY77 523 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 SPSB3Q6PJ21 355 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 MOXD1Q6UVY6 613 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 FOXP4Q8IVH2 680 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-210ENST00000553455 SIX6OS1Q8N1H7 587 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 CIARTQ8N365 385 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-210ENST00000553455 POC1AQ8NBT0 407 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 OR11H4Q8NGC9 324 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 GRAPLQ8TC17 118 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-210ENST00000553455 CCDC107Q8WV48 283 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 NSMAFQ92636 917 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 STAMBPL1Q96FJ0 436 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 SCRN2Q96FV2 425 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 RTP3Q9BQQ7 232 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 INPP5KQ9BT40 448 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 FN3KQ9H479 309 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 A4GALTQ9NPC4 353 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 SNX7Q9UNH6 387 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 KCNK7Q9Y2U2 307 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 TMED3Q9Y3Q3 217 aa4.8□□□□□ -1.64
SYNE2-210ENST00000553455 IGKV2D-30A0A075B6S6 120 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 ACOT8O14734 319 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 KCNAB3O43448 404 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 PRKNO60260 465 aaPredicted RBP4.79□□□□□ -1.64
SYNE2-210ENST00000553455 INHBAP08476 426 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 JAK1P23458 1154 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 MARK3P27448 753 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 PDX1P52945 283 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 DLK1P80370 383 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 VEZF1Q14119 521 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 E2F5Q15329 346 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 NPTX1Q15818 432 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 UGCGQ16739 394 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 MCMDC2Q4G0Z9 681 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 C11orf63Q6NUN7 778 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 C9orf139Q6ZV77 190 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 NFE4Q86UQ8 179 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 NUDT13Q86X67 352 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 TMEM139Q8IV31 216 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 TIGD4Q8IY51 512 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 SLC24A4Q8NFF2 622 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 GDAP1Q8TB36 358 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 HSD17B8Q92506 261 aa4.79□□□□□ -1.64
SYNE2-210ENST00000553455 ST6GALNAC6Q969X2 333 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms