RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 KCNJ1P48048 391 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 GABRA4P48169 554 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 CCZ1BP86790 482 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 CCZ1P86791 482 aaPredicted RBP21.43■■□□□ 1.02
SCARB1-206ENST00000539320 CHAF1BQ13112 559 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 KIR2DS3Q14952 304 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 NCF4Q15080 339 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 UNC5DQ6UXZ4 953 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 ASB18Q6ZVZ8 466 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 LRRC8AQ8IWT6 810 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 KRT222Q8N1A0 295 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 ADAMTS17Q8TE56 1095 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 PANX3Q96QZ0 392 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 DPH2Q9BQC3 489 aaPredicted RBP21.43■■□□□ 1.02
SCARB1-206ENST00000539320 GNPTGQ9UJJ9 305 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 TCFL5Q9UL49 500 aa21.43■■□□□ 1.02
SCARB1-206ENST00000539320 NRDCO43847 1150 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 OR2B3O76000 313 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 TPSB2P20231 275 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 AOAHP28039 575 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 NMBRP28336 390 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 PTGIRP43119 386 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 NPY2RP49146 381 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 CDK16Q00536 496 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 TPSAB1Q15661 275 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 KYNUQ16719 465 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 ZNF385CQ66K41 422 aaPredicted RBP21.42■■□□□ 1.02
SCARB1-206ENST00000539320 PTRHD1Q6GMV3 140 aaKnown RBP21.42■■□□□ 1.02
SCARB1-206ENST00000539320 OTUD6BQ8N6M0 293 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 CFAP61Q8NHU2 1237 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 MRM3Q9HC36 420 aaKnown RBP21.42■■□□□ 1.02
SCARB1-206ENST00000539320 ACSS2Q9NR19 701 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 HOMER3Q9NSC5 361 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 SYBUQ9NX95 663 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 AP1M2Q9Y6Q5 423 aa21.42■■□□□ 1.02
SCARB1-206ENST00000539320 UBR5O95071 2799 aaPredicted RBP21.42■■□□□ 1.02
SCARB1-206ENST00000539320 HECTD1Q9ULT8 2610 aa21.41■■□□□ 1.02
SCARB1-206ENST00000539320 NDUFS3O75489 264 aa21.41■■□□□ 1.02
SCARB1-206ENST00000539320 AGXTP21549 392 aa21.41■■□□□ 1.02
SCARB1-206ENST00000539320 RPS3P23396 243 aaKnown RBP eCLIP21.41■■□□□ 1.024e-20■■■■□ 22.5
SCARB1-206ENST00000539320 MGAT1P26572 445 aa21.41■■□□□ 1.02
SCARB1-206ENST00000539320 CXCR5P32302 372 aa21.41■■□□□ 1.02
SCARB1-206ENST00000539320 COLEC12Q5KU26 742 aa21.41■■□□□ 1.02
SCARB1-206ENST00000539320 LRRC6Q86X45 466 aa21.41■■□□□ 1.02
SCARB1-206ENST00000539320 TEX19Q8NA77 164 aa21.41■■□□□ 1.02
SCARB1-206ENST00000539320 MENTQ9BUN1 341 aa21.41■■□□□ 1.02
SCARB1-206ENST00000539320 P2RY12Q9H244 342 aa21.41■■□□□ 1.02
SCARB1-206ENST00000539320 PADI2Q9Y2J8 665 aa21.41■■□□□ 1.02
SCARB1-206ENST00000539320 H3BMH7 237 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 ZSCAN9O15535 394 aaPredicted RBP21.4■■□□□ 1.02
SCARB1-206ENST00000539320 HCRTR1O43613 425 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 SLCO2B1O94956 709 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 PDGFAP04085 211 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 ARNTP27540 789 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 FOXK1P85037 733 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 FAM69BQ5VUD6 431 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 LRRC8BQ6P9F7 803 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 PRELID2Q8N945 189 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 LINC01555Q8NAE3 123 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 GSDMBQ8TAX9 411 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 PROKR1Q8TCW9 393 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 IL17FQ96PD4 163 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 C17orf62Q9BQA9 187 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 DHRS4Q9BTZ2 278 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 SLC25A23Q9BV35 468 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 KIFC1Q9BW19 673 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 SPRTNQ9H040 489 aaPredicted RBP21.4■■□□□ 1.02
SCARB1-206ENST00000539320 ING2Q9H160 280 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 IRAK4Q9NWZ3 460 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 CIDEBQ9UHD4 219 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 TTC7AQ9ULT0 858 aaPredicted RBP21.4■■□□□ 1.02
SCARB1-206ENST00000539320 SRPK3Q9UPE1 567 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 PPP2R2CQ9Y2T4 447 aa21.4■■□□□ 1.02
SCARB1-206ENST00000539320 PCDHGA9Q9Y5G4 932 aaKnown RBP21.4■■□□□ 1.02
SCARB1-206ENST00000539320 TCRBV7S3A2A0A539 114 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 S1PR4O95977 384 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 MAGP20916 626 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 VPS41P49754 854 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 PGDP52209 483 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 EIF3BP55884 814 aaKnown RBP21.39■■□□□ 1.01
SCARB1-206ENST00000539320 GRB7Q14451 532 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 RHBDD2Q6NTF9 364 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 TAX1BP1Q86VP1 789 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 RAB43Q86YS6 212 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 OR2L8Q8NGY9 312 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 SLC22A18Q96BI1 424 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 MFSD3Q96ES6 412 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 RAB11FIP5Q9BXF6 653 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 SOX13Q9UN79 622 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 PLCL2Q9UPR0 1127 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 RP1L1Q8IWN7 2480 aaPredicted RBP21.39■■□□□ 1.01
SCARB1-206ENST00000539320 DOPEY2Q9Y3R5 2298 aa21.39■■□□□ 1.01
SCARB1-206ENST00000539320 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.38■■□□□ 1.01
SCARB1-206ENST00000539320 RASGRF2O14827 1237 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 KPNA5O15131 536 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 TMEM63AO94886 807 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 VAPBO95292 243 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 CBSLP0DN79 551 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 CD9P21926 228 aa21.38■■□□□ 1.01
SCARB1-206ENST00000539320 CBSP35520 551 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms