RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CHRNA10Q9GZZ6 450 aa14.84□□□□□ -0.03
TPM1-207ENST00000403994 P2RY12Q9H244 342 aa14.84□□□□□ -0.03
TPM1-207ENST00000403994 FAM60AQ9NP50 221 aa14.84□□□□□ -0.03
TPM1-207ENST00000403994 SYBUQ9NX95 663 aa14.84□□□□□ -0.03
TPM1-207ENST00000403994 TLK1Q9UKI8 766 aa14.84□□□□□ -0.03
TPM1-207ENST00000403994 SNX7Q9UNH6 387 aa14.84□□□□□ -0.03
TPM1-207ENST00000403994 FARSAQ9Y285 508 aaKnown RBP14.84□□□□□ -0.03
TPM1-207ENST00000403994 NUP210LQ5VU65 1888 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 ZNF749O43361 778 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 CEP104O60308 925 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 KDM1AO60341 852 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 APOA4P06727 396 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 TPSB2P20231 275 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 MGAT1P26572 445 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 ARNTP27540 789 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 AOAHP28039 575 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 NMBRP28336 390 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 PTGIRP43119 386 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 RAB28P51157 221 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 CHAF1BQ13112 559 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 KIR2DS3Q14952 304 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 NCF4Q15080 339 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 TMED2Q15363 201 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 TPSAB1Q15661 275 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 SLC5A12Q1EHB4 618 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 COLEC12Q5KU26 742 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 UNC5DQ6UXZ4 953 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 GPR135Q8IZ08 494 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 PRELID2Q8N945 189 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 LINC01555Q8NAE3 123 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 ASZ1Q8WWH4 475 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 TCTN2Q96GX1 697 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 BFARQ9NZS9 450 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 CIDEBQ9UHD4 219 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 GNPTGQ9UJJ9 305 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 SERTAD3Q9UJW9 196 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 ANAPC5Q9UJX4 755 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 TCFL5Q9UL49 500 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 TTC7AQ9ULT0 858 aaPredicted RBP14.83□□□□□ -0.04
TPM1-207ENST00000403994 PPP2R2CQ9Y2T4 447 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 PCM1Q15154 2024 aa14.83□□□□□ -0.04
TPM1-207ENST00000403994 TCRBV7S3A2A0A539 114 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 OR2B3O76000 313 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 SLCO2B1O94956 709 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 PDGFAP04085 211 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 RPN2P04844 631 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 RPS3P23396 243 aaKnown RBP eCLIP14.82□□□□□ -0.04
TPM1-207ENST00000403994 CDK16Q00536 496 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 KLRB1Q12918 225 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 GRB7Q14451 532 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 KCNJ11Q14654 390 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 KYNUQ16719 465 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 PTRHD1Q6GMV3 140 aaKnown RBP14.82□□□□□ -0.04
TPM1-207ENST00000403994 ASB18Q6ZVZ8 466 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 OTUD6BQ8N6M0 293 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 N4BP2L2Q92802 583 aaPredicted RBP14.82□□□□□ -0.04
TPM1-207ENST00000403994 MFSD3Q96ES6 412 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 DPH2Q9BQC3 489 aaPredicted RBP14.82□□□□□ -0.04
TPM1-207ENST00000403994 KIFC1Q9BW19 673 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 SLC7A5P2Q9GIP4 190 aa14.82□□□□□ -0.04
TPM1-207ENST00000403994 MRM3Q9HC36 420 aaKnown RBP14.82□□□□□ -0.04
TPM1-207ENST00000403994 RP1L1Q8IWN7 2480 aaPredicted RBP14.82□□□□□ -0.04
TPM1-207ENST00000403994 DOPEY2Q9Y3R5 2298 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 ARGFXA6NJG6 315 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 ISM1B1AKI9 464 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 C9J4A7 227 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 AP3B1O00203 1094 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 ZSCAN9O15535 394 aaPredicted RBP14.81□□□□□ -0.04
TPM1-207ENST00000403994 CTSBP07858 339 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 HBQ1P09105 142 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 MAGP20916 626 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 NPY2RP49146 381 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 VPS41P49754 854 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 FOXK1P85037 733 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 TRIP13Q15645 432 aaPredicted RBP14.81□□□□□ -0.04
TPM1-207ENST00000403994 TYSND1Q2T9J0 566 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 CTSL3PQ5NE16 218 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 RHBDD2Q6NTF9 364 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 LRRC8BQ6P9F7 803 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 CES3Q6UWW8 571 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 TAX1BP1Q86VP1 789 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 LRRC6Q86X45 466 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 FAM20CQ8IXL6 584 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 LMNTD1Q8N9Z9 388 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 CFAP61Q8NHU2 1237 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 IL17FQ96PD4 163 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 PANX3Q96QZ0 392 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 HOMER3Q9NSC5 361 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 SOX13Q9UN79 622 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 RUVBL2Q9Y230 463 aaKnown RBP14.81□□□□□ -0.04
TPM1-207ENST00000403994 CCDC88CQ9P219 2028 aa14.81□□□□□ -0.04
TPM1-207ENST00000403994 SPTAN1Q13813 2472 aaKnown RBP14.81□□□□□ -0.04
TPM1-207ENST00000403994 USP9YO00507 2555 aaPredicted RBP14.8□□□□□ -0.04
TPM1-207ENST00000403994 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.8□□□□□ -0.04
TPM1-207ENST00000403994 RASGRF2O14827 1237 aa14.8□□□□□ -0.04
TPM1-207ENST00000403994 NRDCO43847 1150 aa14.8□□□□□ -0.04
TPM1-207ENST00000403994 NDUFS3O75489 264 aa14.8□□□□□ -0.04
TPM1-207ENST00000403994 VAPBO95292 243 aa14.8□□□□□ -0.04
TPM1-207ENST00000403994 MAGEA6P43360 314 aa14.8□□□□□ -0.04
TPM1-207ENST00000403994 BDKRB1P46663 353 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms