RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	SLC9B1P1	A6NJY1	282 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	SDR42E2	A6NKP2	422 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708		B8ZZF3	427 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	SCRG1	O75711	98 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	VAPB	O95292	243 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	ESR1	P03372	595 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	PRB1	P04280	392 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	KLK3	P07288	261 aa	Predicted RBP	12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	HBQ1	P09105	142 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	ARNT	P27540	789 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	NMBR	P28336	390 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	DLST	P36957	453 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	RAB28	P51157	221 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	CRADD	P78560	199 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	HSPA14	Q0VDF9	509 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	PRKG2	Q13237	762 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	SEMA3A	Q14563	771 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	KCNAB1	Q14722	419 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	KYNU	Q16719	465 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	SLC5A12	Q1EHB4	618 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	TTC23L	Q6PF05	361 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	ZNF517	Q6ZMY9	492 aa	Predicted RBP	12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	UNC5A	Q6ZN44	842 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	OTOA	Q7RTW8	1153 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	ZNF605	Q86T29	641 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	CAND1	Q86VP6	1230 aa	Known RBP	12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	TMEM126B	Q8IUX1	230 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	DCUN1D3	Q8IWE4	304 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	SLC35F6	Q8N357	371 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	APOBEC4	Q8WW27	367 aa	Known RBP	12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	SLCO2A1	Q92959	643 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	MFSD3	Q96ES6	412 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	MS4A14	Q96JA4	679 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	ELMO2	Q96JJ3	720 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	TRAPPC9	Q96Q05	1148 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	STARD5	Q9NSY2	213 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	INTS10	Q9NVR2	710 aa	Known RBP	12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	SYBU	Q9NX95	663 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	MARCH4	Q9P2E8	410 aa	Predicted RBP	12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	KLHL42	Q9P2K6	505 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	CROT	Q9UKG9	612 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	ICK	Q9UPZ9	632 aa		12.19	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	TIAF1	O95411	115 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	CHRM5	P08912	532 aa	Predicted RBP	12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	ST6GAL1	P15907	406 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	CCNF	P41002	786 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	MAGEA3	P43357	314 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	ARCN1	P48444	511 aa	Known RBP	12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	RPS15	P62841	145 aa	Known RBP	12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	CYP4F2	P78329	520 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	DNASE1L3	Q13609	305 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	BRD3	Q15059	726 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	TRIP13	Q15645	432 aa	Predicted RBP	12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	IZUMO3	Q5VZ72	239 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	NEPRO	Q6NW34	567 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	TMEM135	Q86UB9	458 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	UNC5B	Q8IZJ1	945 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	RAB42	Q8N4Z0	105 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	MAGEC3	Q8TD91	643 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	LPGAT1	Q92604	370 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	RUNDC3B	Q96NL0	473 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	OR2A14	Q96R47	310 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	IL17B	Q9UHF5	180 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	AP1M2	Q9Y6Q5	423 aa		12.18	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708		A0A0J9YY10	115 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	TCRBV7S3A2	A0A539	114 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	NKX2-8	O15522	239 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	S1PR4	O95977	384 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	CD63	P08962	238 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	RAB40AL	P0C0E4	278 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	FAM87A	P0C7U9	286 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	UGT2B7	P16662	529 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	PTPN4	P29074	926 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	PKLR	P30613	574 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	VPS41	P49754	854 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	ITGA1	P56199	1179 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	KCNAB2	Q13303	367 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	GPR19	Q15760	415 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	ANKRD20A4	Q4UJ75	823 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	CASC4	Q6P4E1	433 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	MICALCL	Q6ZW33	695 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	PCGF5	Q86SE9	256 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	SYVN1	Q86TM6	617 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	CILP2	Q8IUL8	1156 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	PPIL6	Q8IXY8	311 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	GPR135	Q8IZ08	494 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	OTUD6B	Q8N6M0	293 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	C19orf47	Q8N9M1	422 aa	Known RBP	12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	GABPB2	Q8TAK5	448 aa	Predicted RBP	12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	HMGCLL1	Q8TB92	370 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	CALML6	Q8TD86	181 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	COG1	Q8WTW3	980 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	CT55	Q8WUE5	264 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	THAP4	Q8WY91	577 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	RAD51AP1	Q96B01	352 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	PDLIM2	Q96JY6	352 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	FOPNL	Q96NB1	174 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	BIRC8	Q96P09	236 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	SERPINB12	Q96P63	405 aa		12.17	□□□□□ -0.46
CDK5RAP3-222	ENST00000581708	C17orf62	Q9BQA9	187 aa		12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms