RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 KLQ9UEF7 1012 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 TMEM94Q12767 1356 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 PBRM1Q86U86 1689 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 E7ESA3 106 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 ATP6V1G2-DDX39BF2Z307 99 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 H0Y858 1186 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 PER2O15055 1255 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 B3GALNT1O75752 331 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 OR5F1O95221 314 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 PAPSS2O95340 614 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 SUPT20HL2P0C7V6 817 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 JUNBP17275 347 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 DDOSTP39656 456 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 MLLT3P42568 568 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 APLP1P51693 650 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 AFF1P51825 1210 aaKnown RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 PSMA6P60900 246 aaKnown RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 TWF1Q12792 350 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 DNASE1L3Q13609 305 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 TCEAL5Q5H9L2 206 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 LRRN1Q6UXK5 716 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 RAB11FIP2Q7L804 512 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 PTAR1Q7Z6K3 402 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 PIAS4Q8N2W9 510 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 NPLOC4Q8TAT6 608 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 GAL3ST3Q96A11 431 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 C18orf25Q96B23 403 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 TMEM159Q96B96 161 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 TMEM80Q96HE8 168 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 EXO5Q9H790 373 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 SPON1Q9HCB6 807 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 SEMA4BQ9NPR2 832 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 TRIM36Q9NQ86 728 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 GTF2IRD1Q9UHL9 959 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 NARFQ9UHQ1 456 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 AGAP5A6NIR3 686 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 RIIAD1A6NNX1 92 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 RAMP2O60895 175 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 RNASEH2AO75792 299 aaKnown RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 CDC20Q12834 499 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 ERFEQ4G0M1 354 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 ATG9BQ674R7 924 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 TIGD3Q6B0B8 471 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF598Q86UK7 904 aaKnown RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 TSPYL5Q86VY4 417 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 TXNDC5Q8NBS9 432 aaKnown RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 OR6Q1Q8NGQ2 317 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 GEMIN6Q8WXD5 167 aaKnown RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 GATAD2BQ8WXI9 593 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 OR2M2Q96R28 347 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 POTEKPQ9BYX7 375 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 NKIRAS2Q9NYR9 191 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 TSPAN16Q9UKR8 245 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 DERAQ9Y315 318 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 MN1Q10571 1320 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 RNF225M0QZC1 329 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 XPNPEP2O43895 674 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF432O94892 652 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 RAB36O95755 333 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 IFNA4P05014 189 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 HOXD8P13378 290 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 CKMT2P17540 419 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 KLRC2P26717 231 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 PSMB4P28070 264 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 ADH6P28332 368 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 FAM69AQ5T7M9 428 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 NDUFAF5Q5TEU4 345 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 RPTNQ6XPR3 784 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 IGFN1Q86VF2 1251 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 OR52K1Q8NGK4 314 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 PCDHB18PQ96TA0 734 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 MRM3Q9HC36 420 aaKnown RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 CYTH4Q9UIA0 394 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 CNTNAP4Q9C0A0 1308 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 H3BM21 787 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 RDH16O75452 317 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 GSK3BP49841 420 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 TKTL1P51854 596 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 ARPP19P56211 112 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 SNAPC2Q13487 334 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 SEC23BQ15437 767 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 HSDL1Q3SXM5 330 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 CLVS2Q5SYC1 327 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 METTL11BQ5VVY1 283 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 DPP9Q86TI2 863 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 RNF130Q86XS8 419 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 TMC8Q8IU68 726 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 SLC41A1Q8IVJ1 513 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 ADGRF2Q8IZF7 708 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 SLC44A3Q8N4M1 653 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 SERAC1Q96JX3 654 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 DUSP16Q9BY84 665 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 PRR36Q9H6K5 1346 aa7□□□□□ -1.29
CNOT1-216ENST00000569240 ACKR2O00590 384 aa7□□□□□ -1.29
CNOT1-216ENST00000569240 POLR1CO15160 346 aaPredicted RBP7□□□□□ -1.29
CNOT1-216ENST00000569240 TO15178 435 aa7□□□□□ -1.29
CNOT1-216ENST00000569240 RSL1D1O76021 490 aaKnown RBP7□□□□□ -1.29
CNOT1-216ENST00000569240 MICAL2O94851 1124 aa7□□□□□ -1.29
CNOT1-216ENST00000569240 APOC3P02656 99 aa7□□□□□ -1.29
CNOT1-216ENST00000569240 TACSTD2P09758 323 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms