RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 RPF1Q9H9Y2 349 aaKnown RBP6.29□□□□□ -1.4
PRKCH-204ENST00000553265 KIF9Q9HAQ2 790 aa6.29□□□□□ -1.4
PRKCH-204ENST00000553265 USP29Q9HBJ7 922 aa6.29□□□□□ -1.4
PRKCH-204ENST00000553265 PLSCR4Q9NRQ2 329 aa6.29□□□□□ -1.4
PRKCH-204ENST00000553265 GKN1Q9NS71 199 aa6.29□□□□□ -1.4
PRKCH-204ENST00000553265 LARSQ9P2J5 1176 aaKnown RBP6.29□□□□□ -1.4
PRKCH-204ENST00000553265 MGAT4CQ9UBM8 478 aa6.29□□□□□ -1.4
PRKCH-204ENST00000553265 HOOK1Q9UJC3 728 aaKnown RBP6.29□□□□□ -1.4
PRKCH-204ENST00000553265 ING1Q9UK53 422 aaPredicted RBP6.29□□□□□ -1.4
PRKCH-204ENST00000553265 CNTN6Q9UQ52 1028 aa6.29□□□□□ -1.4
PRKCH-204ENST00000553265 DERAQ9Y315 318 aa6.29□□□□□ -1.4
PRKCH-204ENST00000553265 C2CD2Q9Y426 696 aa6.29□□□□□ -1.4
PRKCH-204ENST00000553265 STYXL1Q9Y6J8 313 aa6.29□□□□□ -1.4
PRKCH-204ENST00000553265 BPTFQ12830 3046 aa6.29□□□□□ -1.4
PRKCH-204ENST00000553265 ASH1LQ9NR48 2969 aaKnown RBP6.29□□□□□ -1.4
PRKCH-204ENST00000553265 APC2O95996 2303 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 PVALEFA0A1B0GWK0 134 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 BCLAF3A2AJT9 711 aaKnown RBP6.28□□□□□ -1.4
PRKCH-204ENST00000553265 B9A039 149 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 ANKRD63C9JTQ0 380 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 H0YCG3 227 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 PLOD2O00469 737 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 CYB561D2O14569 222 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 SUV39H1O43463 412 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 HCRTO43612 131 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 PRAMEF2O60811 474 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 NOL4O94818 638 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 SMC2O95347 1197 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 APBB3O95704 486 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 TOP3BO95985 862 aaKnown RBP6.28□□□□□ -1.4
PRKCH-204ENST00000553265 MT-ND3P03897 115 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 POLBP06746 335 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 RPS2P15880 293 aaKnown RBP6.28□□□□□ -1.4
PRKCH-204ENST00000553265 ALOX12P18054 663 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 BCKDHBP21953 392 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 CNTFP26441 200 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 ADSSP30520 456 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 CXCR5P32302 372 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 AVPR1AP37288 418 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 MATR3P43243 847 aaKnown RBP eCLIP6.28□□□□□ -1.4
PRKCH-204ENST00000553265 TUFMP49411 452 aaKnown RBP6.28□□□□□ -1.4
PRKCH-204ENST00000553265 ACOT2P49753 483 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 TAF6P49848 677 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 NOVA1P51513 510 aaKnown RBP6.28□□□□□ -1.4
PRKCH-204ENST00000553265 CYP4F2P78329 520 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 TXNL4AP83876 142 aaKnown RBP6.28□□□□□ -1.4
PRKCH-204ENST00000553265 SF3A3Q12874 501 aaKnown RBP eCLIP6.28□□□□□ -1.4
PRKCH-204ENST00000553265 KLF10Q13118 480 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 SEMA3BQ13214 749 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 KCNJ12Q14500 433 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 DMC1Q14565 340 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 MTF1Q14872 753 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 PDGFRLQ15198 375 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 RPS6KA2Q15349 733 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 C5orf22Q49AR2 442 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 SDHAF4Q5VUM1 108 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 PMS2CLQ68D20 193 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 ANKRD40Q6AI12 368 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 IRGCQ6NXR0 463 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 ARMCX5Q6P1M9 558 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 ANKRD16Q6P6B7 361 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 CRELD2Q6UXH1 353 aaPredicted RBP6.28□□□□□ -1.4
PRKCH-204ENST00000553265 SYT13Q7L8C5 426 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 WDR53Q7Z5U6 358 aaPredicted RBP6.28□□□□□ -1.4
PRKCH-204ENST00000553265 MON1AQ86VX9 555 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 TMTC1Q8IUR5 882 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 CD302Q8IX05 232 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 PDCL2Q8N4E4 241 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.28□□□□□ -1.4
PRKCH-204ENST00000553265 MAB21L3Q8N8X9 362 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 ZMIZ2Q8NF64 920 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 WDR60Q8WVS4 1066 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 HMGB4Q8WW32 186 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 SMARCE1Q969G3 411 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 TRAPPC9Q96Q05 1148 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 GSDMAQ96QA5 445 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 P2RY13Q9BPV8 354 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 DESI2Q9BSY9 194 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 ECT2Q9H8V3 914 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 PARVGQ9HBI0 331 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 PCSK1NQ9UHG2 260 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 MAN1B1Q9UKM7 699 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 SLC8A2Q9UPR5 921 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 WNT6Q9Y6F9 365 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 PI4KAP42356 2102 aa6.28□□□□□ -1.4
PRKCH-204ENST00000553265 C17orf113A0A1B0GUU1 675 aa6.27□□□□□ -1.41
PRKCH-204ENST00000553265 FRMD3A2A2Y4 597 aa6.27□□□□□ -1.41
PRKCH-204ENST00000553265 CCDC151A5D8V7 595 aa6.27□□□□□ -1.41
PRKCH-204ENST00000553265 TMEM191CA6NGB0 347 aa6.27□□□□□ -1.41
PRKCH-204ENST00000553265 CDX4O14627 284 aaPredicted RBP6.27□□□□□ -1.41
PRKCH-204ENST00000553265 NDC80O14777 642 aa6.27□□□□□ -1.41
PRKCH-204ENST00000553265 TMPRSS11DO60235 418 aa6.27□□□□□ -1.41
PRKCH-204ENST00000553265 FZD7O75084 574 aa6.27□□□□□ -1.41
PRKCH-204ENST00000553265 ATG13O75143 517 aa6.27□□□□□ -1.41
PRKCH-204ENST00000553265 KRT38O76015 456 aa6.27□□□□□ -1.41
PRKCH-204ENST00000553265 TJP3O95049 919 aa6.27□□□□□ -1.41
PRKCH-204ENST00000553265 SLC4A1P02730 911 aa6.27□□□□□ -1.41
PRKCH-204ENST00000553265 ATP1A3P13637 1013 aa6.27□□□□□ -1.41
PRKCH-204ENST00000553265 ATP5DP30049 168 aa6.27□□□□□ -1.41
PRKCH-204ENST00000553265 THBS4P35443 961 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms