RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 AEBP2Q6ZN18 517 aaPredicted RBP25.61■■□□□ 1.69
PRKCH-204ENST00000553265 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
PRKCH-204ENST00000553265 PHF23Q9BUL5 403 aaPredicted RBP22.36■■□□□ 1.17
PRKCH-204ENST00000553265 SENP3Q9H4L4 574 aaPredicted RBP21.56■■□□□ 1.04
PRKCH-204ENST00000553265 PLPPR3Q6T4P5 718 aa20.7■□□□□ 0.9
PRKCH-204ENST00000553265 FOXD1Q16676 465 aa20.03■□□□□ 0.8
PRKCH-204ENST00000553265 ADRA2BP18089 450 aa19.63■□□□□ 0.73
PRKCH-204ENST00000553265 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
PRKCH-204ENST00000553265 PIAS4Q8N2W9 510 aaPredicted RBP19.01■□□□□ 0.63
PRKCH-204ENST00000553265 KCNA4P22459 653 aa18.42■□□□□ 0.54
PRKCH-204ENST00000553265 PPP4R3CPQ6ZMV5 832 aa18.34■□□□□ 0.53
PRKCH-204ENST00000553265 MSH5O43196 834 aa18.23■□□□□ 0.51
PRKCH-204ENST00000553265 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
PRKCH-204ENST00000553265 SCAF1Q9H7N4 1312 aaKnown RBP17.8■□□□□ 0.44
PRKCH-204ENST00000553265 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
PRKCH-204ENST00000553265 MAPK8IP2Q13387 824 aaPredicted RBP17.72■□□□□ 0.43
PRKCH-204ENST00000553265 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
PRKCH-204ENST00000553265 EHMT2Q96KQ7 1210 aa17.63■□□□□ 0.41
PRKCH-204ENST00000553265 SLC4A1APQ9BWU0 796 aaKnown RBP17.57■□□□□ 0.4
PRKCH-204ENST00000553265 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
PRKCH-204ENST00000553265 RNF216Q9NWF9 866 aaPredicted RBP17.24■□□□□ 0.35
PRKCH-204ENST00000553265 CSRNP3Q8WYN3 585 aa17.15■□□□□ 0.34
PRKCH-204ENST00000553265 HOXD11P31277 338 aaPredicted RBP17.06■□□□□ 0.32
PRKCH-204ENST00000553265 ZBTB22O15209 634 aa16.99■□□□□ 0.31
PRKCH-204ENST00000553265 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
PRKCH-204ENST00000553265 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
PRKCH-204ENST00000553265 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
PRKCH-204ENST00000553265 DCAF8L1A6NGE4 600 aa16.63■□□□□ 0.25
PRKCH-204ENST00000553265 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
PRKCH-204ENST00000553265 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRKCH-204ENST00000553265 U3KPZ7 1027 aaPredicted RBP16.12■□□□□ 0.17
PRKCH-204ENST00000553265 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
PRKCH-204ENST00000553265 POTEDQ86YR6 584 aa16■□□□□ 0.15
PRKCH-204ENST00000553265 ATF5Q9Y2D1 282 aaPredicted RBP15.97■□□□□ 0.15
PRKCH-204ENST00000553265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.92■□□□□ 0.14
PRKCH-204ENST00000553265 HNRNPUL2Q1KMD3 747 aaKnown RBP15.92■□□□□ 0.14
PRKCH-204ENST00000553265 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
PRKCH-204ENST00000553265 RNF39Q9H2S5 420 aa15.7■□□□□ 0.1
PRKCH-204ENST00000553265 APLP2Q06481 763 aa15.64■□□□□ 0.09
PRKCH-204ENST00000553265 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
PRKCH-204ENST00000553265 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
PRKCH-204ENST00000553265 TRHP20396 242 aaPredicted RBP15.53■□□□□ 0.08
PRKCH-204ENST00000553265 FKBP8Q14318 412 aa15.52■□□□□ 0.08
PRKCH-204ENST00000553265 CAPN15O75808 1086 aa15.49■□□□□ 0.07
PRKCH-204ENST00000553265 C1QBPQ07021 282 aaKnown RBP15.48■□□□□ 0.07
PRKCH-204ENST00000553265 POLA2Q14181 598 aa15.32■□□□□ 0.04
PRKCH-204ENST00000553265 ABCB7O75027 752 aa15.29■□□□□ 0.04
PRKCH-204ENST00000553265 MKRN4PQ13434 485 aaPredicted RBP15.26■□□□□ 0.03
PRKCH-204ENST00000553265 FBLN2P98095 1184 aa15.16■□□□□ 0.02
PRKCH-204ENST00000553265 NISCHQ9Y2I1 1504 aa15.11■□□□□ 0.01
PRKCH-204ENST00000553265 DSG3P32926 999 aa15.09■□□□□ 0.01
PRKCH-204ENST00000553265 SPDYE4A6NLX3 237 aa15.07■□□□□ 0
PRKCH-204ENST00000553265 CACNB1Q02641 598 aaPredicted RBP15.04■□□□□ -0
PRKCH-204ENST00000553265 ZBTB12Q9Y330 459 aaPredicted RBP14.99□□□□□ -0.01
PRKCH-204ENST00000553265 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
PRKCH-204ENST00000553265 RTN4Q9NQC3 1192 aaKnown RBP14.83□□□□□ -0.04
PRKCH-204ENST00000553265 PROM2Q8N271 834 aa14.82□□□□□ -0.04
PRKCH-204ENST00000553265 AMER1Q5JTC6 1135 aaPredicted RBP14.75□□□□□ -0.05
PRKCH-204ENST00000553265 FBXO3Q9UK99 471 aa14.72□□□□□ -0.05
PRKCH-204ENST00000553265 ZNF692Q9BU19 519 aaPredicted RBP14.71□□□□□ -0.05
PRKCH-204ENST00000553265 SPDYE2BA6NHP3 402 aa14.66□□□□□ -0.06
PRKCH-204ENST00000553265 SPDYE6P0CI01 402 aa14.66□□□□□ -0.06
PRKCH-204ENST00000553265 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
PRKCH-204ENST00000553265 SSUH2Q9Y2M2 353 aa14.62□□□□□ -0.07
PRKCH-204ENST00000553265 VASPP50552 380 aaPredicted RBP14.6□□□□□ -0.07
PRKCH-204ENST00000553265 PABPN1Q86U42 306 aaKnown RBP eCLIP14.56□□□□□ -0.08
PRKCH-204ENST00000553265 IFNLR1Q8IU57 520 aaPredicted RBP14.45□□□□□ -0.1
PRKCH-204ENST00000553265 STAG3Q9UJ98 1225 aa14.34□□□□□ -0.11
PRKCH-204ENST00000553265 RBM42Q9BTD8 480 aaKnown RBP14.3□□□□□ -0.12
PRKCH-204ENST00000553265 PLCD3Q8N3E9 789 aa14.29□□□□□ -0.12
PRKCH-204ENST00000553265 KLHL34Q8N239 644 aa14.27□□□□□ -0.13
PRKCH-204ENST00000553265 MIER1Q8N108 512 aa14.24□□□□□ -0.13
PRKCH-204ENST00000553265 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
PRKCH-204ENST00000553265 SPOCK2Q92563 424 aa14.17□□□□□ -0.14
PRKCH-204ENST00000553265 CLEC11AQ9Y240 323 aa14.16□□□□□ -0.14
PRKCH-204ENST00000553265 REM2Q8IYK8 340 aaPredicted RBP14.14□□□□□ -0.15
PRKCH-204ENST00000553265 SPDYE1Q8NFV5 336 aaPredicted RBP14.14□□□□□ -0.15
PRKCH-204ENST00000553265 PKD2Q13563 968 aa14.12□□□□□ -0.15
PRKCH-204ENST00000553265 PLEKHG5O94827 1062 aa14.08□□□□□ -0.16
PRKCH-204ENST00000553265 DCAF8L2P0C7V8 631 aa14.04□□□□□ -0.16
PRKCH-204ENST00000553265 PRR29P0C7W0 189 aa14.02□□□□□ -0.17
PRKCH-204ENST00000553265 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
PRKCH-204ENST00000553265 SLC24A1O60721 1099 aa14□□□□□ -0.17
PRKCH-204ENST00000553265 ZBTB47Q9UFB7 747 aaPredicted RBP14□□□□□ -0.17
PRKCH-204ENST00000553265 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.17
PRKCH-204ENST00000553265 CREBZFQ9NS37 354 aa13.96□□□□□ -0.17
PRKCH-204ENST00000553265 CIZ1Q9ULV3 898 aaPredicted RBP13.95□□□□□ -0.18
PRKCH-204ENST00000553265 RGL2O15211 777 aa13.85□□□□□ -0.19
PRKCH-204ENST00000553265 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
PRKCH-204ENST00000553265 NUBP1P53384 320 aa13.84□□□□□ -0.19
PRKCH-204ENST00000553265 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
PRKCH-204ENST00000553265 DCAF8Q5TAQ9 597 aa13.76□□□□□ -0.21
PRKCH-204ENST00000553265 GSE1Q14687 1217 aa13.74□□□□□ -0.21
PRKCH-204ENST00000553265 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
PRKCH-204ENST00000553265 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
PRKCH-204ENST00000553265 NPM1P06748 294 aaKnown RBP eCLIP13.7□□□□□ -0.22
PRKCH-204ENST00000553265 CCDC180Q9P1Z9 1646 aa13.69□□□□□ -0.22
PRKCH-204ENST00000553265 PLCB2Q00722 1185 aa13.68□□□□□ -0.22
PRKCH-204ENST00000553265 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
PRKCH-204ENST00000553265 ABCC9O60706 1549 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms