RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ZIK1Q3SY52 487 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 SBSNQ6UWP8 590 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 FAM126BQ8IXS8 530 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 TTLL2Q9BWV7 592 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 P2RY12Q9H244 342 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 POLR1BQ9H9Y6 1135 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 COMMD8Q9NX08 183 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 ZMYM5Q9UJ78 669 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 PCDHB9Q9Y5E1 797 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 PCDHB3Q9Y5E6 796 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 MAGED1Q9Y5V3 778 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 TMEM88BA6NKF7 163 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 STC2O76061 302 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 GUCA1CO95843 209 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 NPPAP01160 153 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 ITGB6P18564 788 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 RPL17P18621 184 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 ADARB1P78563 741 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 GTF2H2Q13888 395 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 CXorf57Q6NSI4 855 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 GTF2H2CQ6P1K8 395 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 USP51Q70EK9 711 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 LYSMD3Q7Z3D4 306 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 RIMKLAQ8IXN7 391 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 CASD1Q96PB1 797 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 CGREF1Q99674 301 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 BDH2Q9BUT1 245 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 NSUN3Q9H649 340 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 EVLQ9UI08 416 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 NEUROG3Q9Y4Z2 214 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 A0A1B0GVM2 712 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 ZNF840PA6NDX5 716 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 H0Y858 1186 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 ANKRD28O15084 1053 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 BMP1P13497 986 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 CTPS1P17812 591 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 ADARP55265 1226 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 RAB39AQ14964 217 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 AARS2Q5JTZ9 985 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 TLR9Q9NR96 1032 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 MAGEL2Q9UJ55 1249 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 DHRS7Q9Y394 339 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 PLXNA4Q9HCM2 1894 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 H7C0S8 307 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 UPK1AO00322 258 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 B4GAT1O43505 415 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 ATE1O95260 518 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 ALPIP09923 528 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 CDH1P12830 882 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 TCF3P15923 654 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 CA5AP35218 305 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 PCBP2Q15366 365 aaKnown RBP eCLIP19.92■□□□□ 0.786e-9■■■■■ 40.7
SHKBP1-225ENST00000600733 HECTD3Q5T447 861 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 GPR107Q5VW38 600 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 NCEH1Q6PIU2 408 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 KCTD8Q6ZWB6 473 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 BCL7CQ8WUZ0 217 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 CDK5RAP1Q96SZ6 601 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 IPPKQ9H8X2 491 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 IL17CQ9P0M4 197 aa19.92■□□□□ 0.78
SHKBP1-225ENST00000600733 FFAR2O15552 330 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 SLC10A3P09131 477 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 PIK3CGP48736 1102 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 HSPA7P48741 367 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 PTGR1Q14914 329 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 ATXN7L2Q5T6C5 722 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 FAM86B1Q8N7N1 296 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 MUS81Q96NY9 551 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 CIPCQ9C0C6 399 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 VAPAQ9P0L0 249 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 PKP3Q9Y446 797 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 PCDHB7Q9Y5E2 793 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 PCDHGA11Q9Y5H2 935 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 PRMT5O14744 637 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 FOXD2O60548 495 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 NFKBIAP25963 317 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 ELK4P28324 431 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 ENTPD1P49961 510 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 NUP107P57740 925 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 TRAF3Q13114 568 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 NEDD8Q15843 81 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 DHRS4L2Q6PKH6 230 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 FAM151BQ6UXP7 276 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 RNF180Q86T96 592 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 ADAMTSL2Q86TH1 951 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 ITIH5Q86UX2 942 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 ITFG1Q8TB96 612 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 TMBIM1Q969X1 311 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 TTPALQ9BTX7 342 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 BOCQ9BWV1 1114 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 GPR63Q9BZJ6 419 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 NAA50Q9GZZ1 169 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 RNF38Q9H0F5 515 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 HIPK3Q9H422 1215 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 FCF1Q9Y324 198 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 ZNF711Q9Y462 761 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 SLC30A1Q9Y6M5 507 aa19.91■□□□□ 0.78
SHKBP1-225ENST00000600733 THSD7BQ9C0I4 1608 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 H3BMQ9 156 aa19.9■□□□□ 0.78
SHKBP1-225ENST00000600733 ZNF701M0R085 212 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms