RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 A8MT66 165 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 AURKAO14965 403 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 RGS10O43665 173 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 LDB2O43679 373 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 MPZL2O60487 215 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 SERPINF2P08697 491 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 TYMPP19971 482 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 TTPAP49638 278 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ZNF45Q02386 682 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ELP6Q0PNE2 266 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 NFATC3Q12968 1075 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 RAB39AQ14964 217 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 KIAA0040Q15053 153 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 DLG2Q15700 870 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 CRY1Q16526 586 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 CERCAMQ5T4B2 595 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 TWF2Q6IBS0 349 aaKnown RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 XKRXQ6PP77 449 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 TLK2Q86UE8 772 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 SPATA2LQ8IUW3 424 aaPredicted RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 FUNDC1Q8IVP5 155 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ZHX1-C8orf76Q96EF9 292 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 MFSD3Q96ES6 412 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 HSPBAP1Q96EW2 488 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 SUSD3Q96L08 255 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 CGREF1Q99674 301 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 SEZ6LQ9BYH1 1024 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 MMP27Q9H306 513 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 GSTO2Q9H4Y5 243 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 PIN4Q9Y237 131 aaKnown RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 LAMA3Q16787 3333 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 MKI67P46013 3256 aaKnown RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 E2F8A0AVK6 867 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 SNAPC5O75971 98 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 WDR47O94967 919 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ARHGEF15O94989 841 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 PRSS23O95084 383 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 NADKO95544 446 aaPredicted RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 SLC4A1P02730 911 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 CYBBP04839 570 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ITIH1P19827 911 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 NMBRP28336 390 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 TIE1P35590 1138 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 RECQLP46063 649 aaPredicted RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 APLP1P51693 650 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 RABGGTBP53611 331 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ITGA1P56199 1179 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 YBEYP58557 167 aaPredicted RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 TAS2R39P59534 338 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 CXCR4P61073 352 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 TAB1Q15750 504 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 THOC7Q6I9Y2 204 aaKnown RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 DCDC5Q6ZRR9 648 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ARMC8Q8IUR7 673 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 EFCAB3Q8N7B9 438 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 FNDC5Q8NAU1 212 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 PHF21BQ96EK2 531 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 NPLQ9BXD5 320 aaPredicted RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ADGRE3Q9BY15 652 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ULBP1Q9BZM6 244 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 POLR1EQ9GZS1 481 aaKnown RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 TKTL2Q9H0I9 626 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 RUBCNLQ9H714 662 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 AGPAT4Q9NRZ5 378 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 LIMD1Q9UGP4 676 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 GMEB2Q9UKD1 530 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 MKLN1Q9UL63 735 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 A3GALT2U3KPV4 340 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 IRGMA1A4Y4 181 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 TMEM247A6NEH6 219 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 GAPDHSO14556 408 aaPredicted RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 HS6ST1O60243 411 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 EEDO75530 441 aaKnown RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 RPP40O75818 363 aaKnown RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 CST1P01037 141 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 PRLP01236 227 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 IL6P05231 212 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 PSMB9P28065 219 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 IFNA8P32881 189 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 TM4SF4P48230 202 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 OXCT1P55809 520 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 IL2P60568 153 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 MRPS6P82932 125 aaKnown RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 IL1RL1Q01638 556 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 NR6A1Q15406 480 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 NFE2Q16621 373 aaPredicted RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 ZNF789Q5FWF6 425 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 MFSD4BQ5TF39 518 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 RSBN1Q5VWQ0 802 aaPredicted RBP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 XKR5Q6UX68 686 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 USP43Q70EL4 1123 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 LARP4Q71RC2 724 aaKnown RBP eCLIP4.09□□□□□ -1.75
UBE4A-201ENST00000252108 SPPL2CQ8IUH8 684 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 OR2T12Q8NG77 320 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 OR6J1Q8NGC5 347 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 MCFD2Q8NI22 146 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 DNAJB3Q8WWF6 145 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 SLC47A1Q96FL8 570 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 CRELD1Q96HD1 420 aa4.09□□□□□ -1.75
UBE4A-201ENST00000252108 GLT1D1Q96MS3 346 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms