RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SLC11A2P49281 568 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 NKX3-2P78367 333 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 MYBPC3Q14896 1274 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 RAB39AQ14964 217 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 PTPRRQ15256 657 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 FXNQ16595 210 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 KLHL35Q6PF15 583 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 USP51Q70EK9 711 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 RIMKLAQ8IXN7 391 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 KCNJ9Q92806 393 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 ADGRE3Q9BY15 652 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 MAGEL2Q9UJ55 1249 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 DNMT3LQ9UJW3 386 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 GABRQQ9UN88 632 aa14.37□□□□□ -0.11
MSH5-201ENST00000375703 ZFC3H1O60293 1989 aaKnown RBP14.37□□□□□ -0.11
MSH5-201ENST00000375703 ATE1O95260 518 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 G6PDP11413 515 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 CDH1P12830 882 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 YAP1P46937 504 aaKnown RBP14.36□□□□□ -0.11
MSH5-201ENST00000375703 ENTPD1P49961 510 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 FAM189BP81408 668 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 GPR17Q13304 367 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 ZIK1Q3SY52 487 aaPredicted RBP14.36□□□□□ -0.11
MSH5-201ENST00000375703 PYCR3Q53H96 274 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 CCNYL2Q5T2Q4 361 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 RSPO2Q6UXX9 243 aaPredicted RBP14.36□□□□□ -0.11
MSH5-201ENST00000375703 RASAL3Q86YV0 1011 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 DENND1CQ8IV53 801 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 LEMD2Q8NC56 503 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 ZNF420Q8TAQ5 688 aaPredicted RBP14.36□□□□□ -0.11
MSH5-201ENST00000375703 ABTB1Q969K4 478 aaPredicted RBP14.36□□□□□ -0.11
MSH5-201ENST00000375703 HSPBAP1Q96EW2 488 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 HBEGFQ99075 208 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 NACA2Q9H009 215 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 A0A0U1RQS6 177 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 TTC36A6NLP5 189 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 H0YAE9 185 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 H3BNC9 293 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 MTPNP58546 118 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 PLIN5Q00G26 463 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 SELPLGQ14242 412 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 C18orf21Q32NC0 220 aaPredicted RBP14.36□□□□□ -0.11
MSH5-201ENST00000375703 TMEM214Q6NUQ4 689 aaKnown RBP14.36□□□□□ -0.11
MSH5-201ENST00000375703 PRR23BQ6ZRT6 265 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 CHST15Q7LFX5 561 aaPredicted RBP14.36□□□□□ -0.11
MSH5-201ENST00000375703 NUDT8Q8WV74 236 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 LINC01599Q8WXQ3 324 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 THAP11Q96EK4 314 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 NTN4Q9HB63 628 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 HEBP1Q9NRV9 189 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 COMMD8Q9NX08 183 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 RHBDL2Q9NX52 303 aa14.36□□□□□ -0.11
MSH5-201ENST00000375703 TSR3Q9UJK0 312 aaKnown RBP14.36□□□□□ -0.11
MSH5-201ENST00000375703 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.35□□□□□ -0.11
MSH5-201ENST00000375703 GRXCR2A6NFK2 248 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 ARNTLO00327 626 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 KATNA1O75449 491 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 CLDN11O75508 207 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 VNN2O95498 520 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 F11P03951 625 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 RHOCP08134 193 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 CKBP12277 381 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 PTGER3P43115 390 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 HTR6P50406 440 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 DGKQP52824 942 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 ZNF177Q13360 481 aaPredicted RBP14.35□□□□□ -0.11
MSH5-201ENST00000375703 NR6A1Q15406 480 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 AP5B1Q2VPB7 878 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 CYP20A1Q6UW02 462 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 FRA10AC1Q70Z53 315 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 FAM126BQ8IXS8 530 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 DTWD1Q8N5C7 304 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 ITFG1Q8TB96 612 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 MUS81Q96NY9 551 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 CGREF1Q99674 301 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 RETREG1Q9H6L5 497 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 CDH7Q9ULB5 785 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 PCDHGA11Q9Y5H2 935 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 COMMD10Q9Y6G5 202 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 ANKRD36A6QL64 1941 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 SLC38A8A6NNN8 435 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 H3BMQ9 156 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 TULP3O75386 442 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 DEAF1O75398 565 aaPredicted RBP14.35□□□□□ -0.11
MSH5-201ENST00000375703 GMNNO75496 209 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 ESR1P03372 595 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 DCKP27707 260 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 HLCSP50747 726 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 C16orf72Q14CZ0 275 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 NEDD8Q15843 81 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 FAM98BQ52LJ0 330 aaKnown RBP14.35□□□□□ -0.11
MSH5-201ENST00000375703 AARS2Q5JTZ9 985 aaKnown RBP14.35□□□□□ -0.11
MSH5-201ENST00000375703 CCSAPQ6IQ19 270 aaPredicted RBP14.35□□□□□ -0.11
MSH5-201ENST00000375703 OR4F6Q8NGB9 312 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 MIPOL1Q8TD10 442 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 COG8Q96MW5 612 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 NUDT4Q9NZJ9 180 aa14.35□□□□□ -0.11
MSH5-201ENST00000375703 IFT80Q9P2H3 777 aaPredicted RBP14.35□□□□□ -0.11
MSH5-201ENST00000375703 TNPO3Q9Y5L0 923 aaKnown RBP14.35□□□□□ -0.11
MSH5-201ENST00000375703 ILVBLA1L0T0 632 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms