RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 GDE1Q9NZC3 331 aa6.59□□□□□ -1.35
TMC1-201ENST00000297784 COPG2Q9UBF2 871 aa6.59□□□□□ -1.35
TMC1-201ENST00000297784 LHX3Q9UBR4 397 aa6.59□□□□□ -1.35
TMC1-201ENST00000297784 ZMYM5Q9UJ78 669 aa6.59□□□□□ -1.35
TMC1-201ENST00000297784 FCF1Q9Y324 198 aaKnown RBP6.59□□□□□ -1.35
TMC1-201ENST00000297784 VPS13AQ96RL7 3174 aa6.59□□□□□ -1.35
TMC1-201ENST00000297784 ZCWPW2A0A1B0GU75 182 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 TCRBV3S1A0A5B6 114 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 DYTNA2CJ06 578 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 HEPACAM2A8MVW5 462 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 H2AFYO75367 372 aaKnown RBP6.59□□□□□ -1.36
TMC1-201ENST00000297784 C7P10643 843 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 RALBP11234 206 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 BMP2P12643 396 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 ARSAP15289 507 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 CD247P20963 164 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 SLC7A1P30825 629 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 STK19P49842 368 aaPredicted RBP6.59□□□□□ -1.36
TMC1-201ENST00000297784 WNT3AP56704 352 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 FCHO2Q0JRZ9 810 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 NFATC3Q12968 1075 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 PTPRRQ15256 657 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 TRIM16LQ309B1 348 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 SLC9B1Q4ZJI4 515 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 INO80DQ53TQ3 878 aaPredicted RBP6.59□□□□□ -1.36
TMC1-201ENST00000297784 MROH9Q5TGP6 573 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 VWA5B1Q5TIE3 1220 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 STEAP4Q687X5 459 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 PARM1Q6UWI2 310 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 SLC15A4Q8N697 577 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 DCAF4L2Q8NA75 395 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 IPMKQ8NFU5 416 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 MFSD3Q96ES6 412 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 MYO19Q96H55 970 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 LRCH3Q96II8 777 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 RPL10LQ96L21 214 aaKnown RBP6.59□□□□□ -1.36
TMC1-201ENST00000297784 SMIM14Q96QK8 99 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 TBL1YQ9BQ87 522 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 POMKQ9H5K3 350 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 LRRC40Q9H9A6 602 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 WDR41Q9HAD4 459 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 TCF7L2Q9NQB0 619 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 HPS4Q9NQG7 708 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 C8orf4Q9NR00 106 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 TBC1D14Q9P2M4 693 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 UBA2Q9UBT2 640 aaPredicted RBP6.59□□□□□ -1.36
TMC1-201ENST00000297784 IFT52Q9Y366 437 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 TICRRQ7Z2Z1 1910 aa6.59□□□□□ -1.36
TMC1-201ENST00000297784 COL4A2P08572 1712 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 ARNTLO00327 626 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 PLOD2O00469 737 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 INSIG1O15503 277 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 FOXD2O60548 495 aaPredicted RBP6.58□□□□□ -1.36
TMC1-201ENST00000297784 ANXA9O76027 345 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 JUNBP17275 347 aaPredicted RBP6.58□□□□□ -1.36
TMC1-201ENST00000297784 DPP6P42658 865 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 NME5P56597 212 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 ITKQ08881 620 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 NSUN2Q08J23 767 aaKnown RBP eCLIP6.58□□□□□ -1.36
TMC1-201ENST00000297784 BNIP3Q12983 259 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 PMS2P3Q13401 168 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 PDE1CQ14123 709 aaPredicted RBP6.58□□□□□ -1.36
TMC1-201ENST00000297784 RAB39AQ14964 217 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 PCSK7Q16549 785 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 GEN1Q17RS7 908 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 PITRM1Q5JRX3 1037 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 FGD3Q5JSP0 725 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 INTS11Q5TA45 600 aaKnown RBP6.58□□□□□ -1.36
TMC1-201ENST00000297784 TMEM214Q6NUQ4 689 aaKnown RBP6.58□□□□□ -1.36
TMC1-201ENST00000297784 IGFN1Q86VF2 1251 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 ETFBKMTQ8IXQ9 262 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 MYO1HQ8N1T3 1032 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 FAM47BQ8NA70 645 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 SMRP1Q8NCR6 262 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 PNPT1Q8TCS8 783 aaKnown RBP6.58□□□□□ -1.36
TMC1-201ENST00000297784 ALPK1Q96QP1 1244 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 SLC29A1Q99808 456 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 ARPC5LQ9BPX5 153 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 POLR1EQ9GZS1 481 aaKnown RBP6.58□□□□□ -1.36
TMC1-201ENST00000297784 EFCAB1Q9HAE3 211 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 MAGEE1Q9HCI5 957 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 SLC17A6Q9P2U8 582 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 CORINQ9Y5Q5 1042 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 NOX1Q9Y5S8 564 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 SCN8AQ9UQD0 1980 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 TCF20Q9UGU0 1960 aaKnown RBP6.58□□□□□ -1.36
TMC1-201ENST00000297784 TMX2-CTNND1H3BSU7 103 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 KDM1AO60341 852 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 KLHL41O60662 606 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 CPNE6O95741 557 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 F7P08709 466 aaPredicted RBP6.58□□□□□ -1.36
TMC1-201ENST00000297784 LAMP2P13473 410 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 HOXB8P17481 243 aaPredicted RBP6.58□□□□□ -1.36
TMC1-201ENST00000297784 POLR2EP19388 210 aaKnown RBP6.58□□□□□ -1.36
TMC1-201ENST00000297784 ARNTP27540 789 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 SLC6A11P48066 632 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 SERPINH1P50454 418 aaKnown RBP6.58□□□□□ -1.36
TMC1-201ENST00000297784 CDH17Q12864 832 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 PTPRNQ16849 979 aa6.58□□□□□ -1.36
TMC1-201ENST00000297784 SIRPB2Q5JXA9 342 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms