RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 HAPLN1P10915 354 aaPredicted RBP11.59□□□□□ -0.55
SYNPO-204ENST00000519664 CENPAP49450 140 aa11.59□□□□□ -0.55
SYNPO-204ENST00000519664 GATMP50440 423 aa11.59□□□□□ -0.55
SYNPO-204ENST00000519664 RAB15P59190 212 aa11.59□□□□□ -0.55
SYNPO-204ENST00000519664 ADGRE1Q14246 886 aa11.59□□□□□ -0.55
SYNPO-204ENST00000519664 TXNDC8Q6A555 127 aa11.59□□□□□ -0.55
SYNPO-204ENST00000519664 CASP12Q6UXS9 341 aa11.59□□□□□ -0.55
SYNPO-204ENST00000519664 COX4I2Q96KJ9 171 aa11.59□□□□□ -0.55
SYNPO-204ENST00000519664 NOL6Q9H6R4 1146 aaKnown RBP11.59□□□□□ -0.55
SYNPO-204ENST00000519664 AMBNQ9NP70 447 aa11.59□□□□□ -0.55
SYNPO-204ENST00000519664 DNAJB4Q9UDY4 337 aa11.59□□□□□ -0.55
SYNPO-204ENST00000519664 OGDHLQ9ULD0 1010 aa11.59□□□□□ -0.55
SYNPO-204ENST00000519664 EI24O14681 340 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 FFAR2O15552 330 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 NOBOXO60393 691 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 NPHS1O60500 1241 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 ACLYP53396 1101 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 NAA20P61599 178 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 NOGQ13253 232 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 PLPP4Q5VZY2 271 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 AGMOQ6ZNB7 445 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 TMPRSS11BQ86T26 416 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 TRIM69Q86WT6 500 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 BORCS5Q969J3 196 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 TMEM74Q96NL1 305 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 CHID1Q9BWS9 393 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 OSBPL2Q9H1P3 480 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 ABCB10Q9NRK6 738 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 TLR6Q9Y2C9 796 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 NWD2Q9ULI1 1742 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 SLC38A8A6NNN8 435 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 CCL16O15467 120 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 SCNN1AP37088 669 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 HPCAL1P37235 193 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 CYP4F8P98187 520 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 GTF2H2Q13888 395 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 PLA2G4EQ3MJ16 856 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 RABL3Q5HYI8 236 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 GTF2H2CQ6P1K8 395 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 MSANTD2Q6P1R3 559 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 EPGNQ6UW88 154 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 MTSS1LQ765P7 747 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 PROX1Q92786 737 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 WRAP53Q9BUR4 548 aaKnown RBP11.58□□□□□ -0.56
SYNPO-204ENST00000519664 MAF1Q9H063 256 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 CACNA1SQ13698 1873 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 CEP290O15078 2479 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 MYH4Q9Y623 1939 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 RBM47A0AV96 593 aaKnown RBP11.58□□□□□ -0.56
SYNPO-204ENST00000519664 LRRC14BA6NHZ5 514 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 SLC28A1O00337 649 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 ASNA1O43681 348 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 ELFN1P0C7U0 828 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 IMPDH1P20839 514 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 TTKP33981 857 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 SOX6P35712 828 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 KIR3DL1P43629 444 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 RPS9P46781 194 aaKnown RBP11.58□□□□□ -0.56
SYNPO-204ENST00000519664 INO80DQ53TQ3 878 aaPredicted RBP11.58□□□□□ -0.56
SYNPO-204ENST00000519664 CYP4Z1Q86W10 505 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 KBTBD7Q8WVZ9 684 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 SLC47A1Q96FL8 570 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 EPS8L2Q9H6S3 715 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 VRTNQ9H8Y1 702 aa11.58□□□□□ -0.56
SYNPO-204ENST00000519664 A6NHS1 94 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 UROSP10746 265 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 ALDH4A1P30038 563 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 GKP32189 559 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 CDH4P55283 916 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 KRR1Q13601 381 aaKnown RBP11.57□□□□□ -0.56
SYNPO-204ENST00000519664 GRB14Q14449 540 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 PHKG1Q16816 387 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 HIPK1Q86Z02 1210 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 VPS35Q96QK1 796 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 TPK1Q9H3S4 243 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 MOCS1Q9NZB8 636 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 OAZ3Q9UMX2 235 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 PTGDR2Q9Y5Y4 395 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 F5P12259 2224 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.57□□□□□ -0.56
SYNPO-204ENST00000519664 SORBS2O94875 1100 aaKnown RBP11.57□□□□□ -0.56
SYNPO-204ENST00000519664 CCNA2P20248 432 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 MAPK8P45983 427 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 SMG8Q8ND04 991 aaKnown RBP11.57□□□□□ -0.56
SYNPO-204ENST00000519664 ING5Q8WYH8 240 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 SUSD3Q96L08 255 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 CXCL16Q9H2A7 254 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 CARD8Q9Y2G2 431 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 BBIP1A8MTZ0 92 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 hCG_2039718K7EN88 272 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 ECI2O75521 394 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 TRBC1P01850 177 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 CTNNB1P35222 781 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 ARL4DP49703 201 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 HERVK_113P63132 956 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 CHIT1Q13231 466 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 NR1D2Q14995 579 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 ARMC4Q5T2S8 1044 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 ARMC6Q6NXE6 501 aa11.57□□□□□ -0.56
SYNPO-204ENST00000519664 LYSMD3Q7Z3D4 306 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms