RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 RAMP2O60895 175 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 CSRP3P50461 194 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 CDH4P55283 916 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 PMS2P3Q13401 168 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 POLD3Q15054 466 aaPredicted RBP23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 NPAS3Q8IXF0 933 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 PELI3Q8N2H9 469 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 MFSD2AQ8NA29 543 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 OR7D4Q8NG98 312 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 HMGCLL1Q8TB92 370 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 TSGA13Q96PP4 275 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 MCMBPQ9BTE3 642 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 TMEM247A6NEH6 219 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 SDHDO14521 159 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 JCHAINP01591 159 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 MAPKAPK2P49137 400 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 AARS2Q5JTZ9 985 aaKnown RBP23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 GPR107Q5VW38 600 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 CXorf57Q6NSI4 855 aaKnown RBP23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 VPS39Q96JC1 886 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 LINC00597Q9H2U6 94 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 SPAG4Q9NPE6 437 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 CLEC4EQ9ULY5 219 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 ACTL7AQ9Y615 435 aa23.34■■□□□ 1.33
TRIOBP-203ENST00000403663 A0A1B0GVM2 712 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 TRIM64BA6NI03 449 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 SOX1O00570 391 aaPredicted RBP23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 ZBTB24O43167 697 aaPredicted RBP23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 PEX11BO96011 259 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 HOXD12P35452 270 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 VIPR2P41587 438 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 GLRBP48167 497 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 PGGT1BP53609 377 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 STX5Q13190 355 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 ADAM15Q13444 863 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 ZNF77Q15935 545 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 REP15Q6BDI9 236 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 GET4Q7L5D6 327 aaPredicted RBP23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 FAM110BQ8TC76 370 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 CHPT1Q8WUD6 406 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 TANKQ92844 425 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 FGF13Q92913 245 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 TCF12Q99081 682 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 GPATCH1Q9BRR8 931 aaKnown RBP23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 ARMC7Q9H6L4 198 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 SLC39A10Q9ULF5 831 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 CLDN11O75508 207 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 CCNCP24863 283 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 CD68P34810 354 aaPredicted RBP23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 RXRGP48443 463 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 NME5P56597 212 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 IRAK1BP1Q5VVH5 260 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 ZNF354CQ86Y25 554 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 STYXQ8WUJ0 223 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 MTCH2Q9Y6C9 303 aa23.33■■□□□ 1.33
TRIOBP-203ENST00000403663 ZNF839A8K0R7 811 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 USP12O75317 370 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 FSHRP23945 695 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 CSE1LP55060 971 aaKnown RBP23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 KCNC4Q03721 635 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 RAB39AQ14964 217 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 C16orf87Q6PH81 154 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 TMEM26Q6ZUK4 368 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 ERMP1Q7Z2K6 904 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 PID1Q7Z2X4 250 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 CARNMT1Q8N4J0 409 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 MFSD3Q96ES6 412 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 BRD8Q9H0E9 1235 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 KLHL8Q9P2G9 620 aaPredicted RBP23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 HTR3EA5X5Y0 456 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 SAC3D1A6NKF1 404 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 TARM1B6A8C7 271 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 TTKP33981 857 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 GNA12Q03113 381 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 BNIP3Q12983 259 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 SERINC3Q13530 473 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 FRG1Q14331 258 aaKnown RBP23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 SLC15A3Q8IY34 581 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 CBR4Q8N4T8 237 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 CANT1Q8WVQ1 401 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 ADI1Q9BV57 179 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 ARMC1Q9NVT9 282 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 TLK1Q9UKI8 766 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 WNT6Q9Y6F9 365 aa23.32■■□□□ 1.32
TRIOBP-203ENST00000403663 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 DLX3O60479 287 aa23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 BMXP51813 675 aa23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 ZNF177Q13360 481 aaPredicted RBP23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 ATP1A4Q13733 1029 aa23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 GRM3Q14832 879 aa23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 MOGQ16653 247 aa23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 FAM78AQ5JUQ0 283 aa23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 ANKRD26P1Q6NSI1 321 aa23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 CHST9Q7L1S5 443 aa23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 FSTL5Q8N475 847 aaPredicted RBP23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 PACRGLQ8N7B6 248 aa23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 HJURPQ8NCD3 748 aaPredicted RBP23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 ITPKCQ96DU7 683 aa23.31■■□□□ 1.32
TRIOBP-203ENST00000403663 SCYL1Q96KG9 808 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms