RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W UTP5Q04177 643 aaKnown RBP5.66□□□□□ -1.5
SCD6YPR129W LAP2Q10740 671 aa5.66□□□□□ -1.5
SCD6YPR129W PRE10P21242 288 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
SCD6YPR129W AIM26P32858 118 aa5.64□□□□□ -1.51
SCD6YPR129W SAM37P50110 327 aa5.64□□□□□ -1.51
SCD6YPR129W YCS4Q06156 1176 aa5.64□□□□□ -1.51
SCD6YPR129W CTS1P29029 562 aa5.63□□□□□ -1.51
SCD6YPR129W GRS1P38088 690 aaKnown RBP5.63□□□□□ -1.51
SCD6YPR129W XKS1P42826 600 aa5.63□□□□□ -1.51
SCD6YPR129W ENV11P53246 860 aa5.63□□□□□ -1.51
SCD6YPR129W GPI13Q07830 1017 aa5.63□□□□□ -1.51
SCD6YPR129W SHM2P37291 469 aaKnown RBP5.62□□□□□ -1.51
SCD6YPR129W CIC1P38779 376 aaKnown RBP5.62□□□□□ -1.51
SCD6YPR129W YJL045WP47052 634 aa5.62□□□□□ -1.51
SCD6YPR129W MSH3P25336 1018 aa5.61□□□□□ -1.51
SCD6YPR129W ATG14P38270 344 aa5.61□□□□□ -1.51
SCD6YPR129W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
SCD6YPR129W YDR132CQ03900 495 aa5.61□□□□□ -1.51
SCD6YPR129W RLF2Q12495 606 aa5.61□□□□□ -1.51
SCD6YPR129W TUB2P02557 457 aaKnown RBP5.6□□□□□ -1.51
SCD6YPR129W VMA4P22203 233 aaKnown RBP5.6□□□□□ -1.51
SCD6YPR129W MDJ2P42834 146 aa5.6□□□□□ -1.51
SCD6YPR129W TAF7Q05021 590 aa5.6□□□□□ -1.51
SCD6YPR129W RSC58Q07979 502 aa5.6□□□□□ -1.51
SCD6YPR129W FRT1Q99332 602 aa5.6□□□□□ -1.51
SCD6YPR129W QNS1P38795 714 aaKnown RBP5.59□□□□□ -1.51
SCD6YPR129W NUT2Q06213 157 aa5.59□□□□□ -1.51
SCD6YPR129W NBA1Q08229 501 aaKnown RBP5.59□□□□□ -1.51
SCD6YPR129W SPS1P08458 490 aa5.58□□□□□ -1.52
SCD6YPR129W YSC84P32793 468 aa5.58□□□□□ -1.52
SCD6YPR129W ERP5P38819 212 aa5.58□□□□□ -1.52
SCD6YPR129W PEX13P80667 386 aa5.58□□□□□ -1.52
SCD6YPR129W YOR352WQ08816 343 aa5.58□□□□□ -1.52
SCD6YPR129W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
SCD6YPR129W TAT2P38967 592 aa5.57□□□□□ -1.52
SCD6YPR129W VPS53P47061 822 aa5.57□□□□□ -1.52
SCD6YPR129W YNR063WP53749 607 aa5.57□□□□□ -1.52
SCD6YPR129W RKM2Q03942 479 aa5.57□□□□□ -1.52
SCD6YPR129W SGD1Q06132 899 aa5.57□□□□□ -1.52
SCD6YPR129W PNS1Q12412 539 aa5.57□□□□□ -1.52
SCD6YPR129W RSM26P47141 266 aa5.56□□□□□ -1.52
SCD6YPR129W SPT20P50875 604 aa5.56□□□□□ -1.52
SCD6YPR129W YBL113CQ7M4S9 792 aa5.56□□□□□ -1.52
SCD6YPR129W TAD3Q9URQ3 322 aa5.56□□□□□ -1.52
SCD6YPR129W PRP40P33203 583 aaKnown RBP5.55□□□□□ -1.52
SCD6YPR129W LAM1P38851 1228 aa5.55□□□□□ -1.52
SCD6YPR129W MPT5P39016 859 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
SCD6YPR129W MEF2P39677 819 aa5.55□□□□□ -1.52
SCD6YPR129W GCN5Q03330 439 aa5.55□□□□□ -1.52
SCD6YPR129W COQ4O13525 335 aa5.54□□□□□ -1.52
SCD6YPR129W KAR2P16474 682 aaKnown RBP5.54□□□□□ -1.52
SCD6YPR129W HNT2P49775 206 aa5.54□□□□□ -1.52
SCD6YPR129W CDC3P32457 520 aaKnown RBP5.53□□□□□ -1.52
SCD6YPR129W SQT1P35184 431 aa5.53□□□□□ -1.52
SCD6YPR129W ADD66P36040 267 aa5.53□□□□□ -1.52
SCD6YPR129W RDH54P38086 958 aa5.53□□□□□ -1.52
SCD6YPR129W CCZ1P38273 704 aa5.53□□□□□ -1.52
SCD6YPR129W SSA1P10591 642 aaKnown RBP5.52□□□□□ -1.53
SCD6YPR129W UGA4P32837 571 aa5.52□□□□□ -1.53
SCD6YPR129W PEX28P38848 579 aa5.52□□□□□ -1.53
SCD6YPR129W ULP1Q02724 621 aa5.52□□□□□ -1.53
SCD6YPR129W RCL1Q08096 367 aaPredicted RBP5.52□□□□□ -1.53
SCD6YPR129W BAP2P38084 609 aa5.51□□□□□ -1.53
SCD6YPR129W SEC26P41810 973 aaKnown RBP5.51□□□□□ -1.53
SCD6YPR129W CYC1P00044 109 aaPredicted RBP5.5□□□□□ -1.53
SCD6YPR129W VPS35P34110 944 aa5.5□□□□□ -1.53
SCD6YPR129W PUF4P25339 888 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53 RIP-Chip
SCD6YPR129W KIP1P28742 1111 aa5.49□□□□□ -1.53
SCD6YPR129W GCD6P32501 712 aaKnown RBP5.49□□□□□ -1.53
SCD6YPR129W DOM34P33309 386 aa5.49□□□□□ -1.53
SCD6YPR129W TNA1P53322 534 aa5.49□□□□□ -1.53
SCD6YPR129W DAL4Q04895 635 aa5.49□□□□□ -1.53
SCD6YPR129W TRM2P33753 639 aa5.48□□□□□ -1.53
SCD6YPR129W PIK1P39104 1066 aa5.48□□□□□ -1.53
SCD6YPR129W YGL140CP53120 1219 aa5.48□□□□□ -1.53
SCD6YPR129W HOS3Q02959 697 aaKnown RBP5.48□□□□□ -1.53
SCD6YPR129W DUS4Q06063 367 aa5.48□□□□□ -1.53
SCD6YPR129W PUS9Q12069 462 aa5.48□□□□□ -1.53
SCD6YPR129W ROT1Q03691 256 aa5.47□□□□□ -1.53
SCD6YPR129W EST2Q06163 884 aa5.47□□□□□ -1.53
SCD6YPR129W RSB1Q08417 382 aa5.47□□□□□ -1.53
SCD6YPR129W PHO4P07270 312 aaKnown RBP5.46□□□□□ -1.54
SCD6YPR129W HEM13P11353 328 aaKnown RBP5.46□□□□□ -1.54
SCD6YPR129W AFG2P32794 780 aa5.46□□□□□ -1.54
SCD6YPR129W GPB2P39717 880 aa5.46□□□□□ -1.54
SCD6YPR129W HAT1Q12341 374 aa5.46□□□□□ -1.54
SCD6YPR129W PTC5Q12511 572 aa5.46□□□□□ -1.54
SCD6YPR129W SEC23P15303 768 aaKnown RBP5.45□□□□□ -1.54
SCD6YPR129W PLB2Q03674 706 aa5.45□□□□□ -1.54
SCD6YPR129W ADI1Q03677 179 aa5.45□□□□□ -1.54
SCD6YPR129W SNF5P18480 905 aa5.44□□□□□ -1.54
SCD6YPR129W RPN3P40016 523 aaKnown RBP5.44□□□□□ -1.54
SCD6YPR129W MSE1P48525 536 aa5.44□□□□□ -1.54
SCD6YPR129W STE11P23561 717 aa5.43□□□□□ -1.54
SCD6YPR129W YPL109CQ02981 657 aa5.43□□□□□ -1.54
SCD6YPR129W RSM24Q03976 319 aa5.43□□□□□ -1.54
SCD6YPR129W OXR1Q08952 273 aa5.43□□□□□ -1.54
SCD6YPR129W SPO21Q12411 609 aa5.43□□□□□ -1.54
SCD6YPR129W HCM1P25364 564 aa5.42□□□□□ -1.54
SCD6YPR129W CDC20P26309 610 aa5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms