RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
SGF11YPL047W GSF2Q04697 403 aaKnown RBP2.86□□□□□ -1.95
SGF11YPL047W YCS4Q06156 1176 aa2.86□□□□□ -1.95
SGF11YPL047W YLR358CO13565 187 aa2.85□□□□□ -1.95
SGF11YPL047W TRL1P09880 827 aaKnown RBP2.85□□□□□ -1.95
SGF11YPL047W SRO9P25567 434 aaKnown RBP2.85□□□□□ -1.95
SGF11YPL047W SHM2P37291 469 aaKnown RBP2.85□□□□□ -1.95
SGF11YPL047W CIC1P38779 376 aaKnown RBP2.85□□□□□ -1.95
SGF11YPL047W YNR063WP53749 607 aa2.85□□□□□ -1.95
SGF11YPL047W PEX13P80667 386 aa2.85□□□□□ -1.95
SGF11YPL047W NOG1Q02892 647 aaKnown RBP2.85□□□□□ -1.95
SGF11YPL047W CLU1Q03690 1277 aaKnown RBP2.85□□□□□ -1.95
SGF11YPL047W UTP5Q04177 643 aaKnown RBP2.85□□□□□ -1.95
SGF11YPL047W RSA3Q05942 220 aaKnown RBP2.85□□□□□ -1.95
SGF11YPL047W NBA1Q08229 501 aaKnown RBP2.85□□□□□ -1.95
SGF11YPL047W SPS1P08458 490 aa2.84□□□□□ -1.95
SGF11YPL047W VMA4P22203 233 aaKnown RBP2.84□□□□□ -1.95
SGF11YPL047W MSH3P25336 1018 aa2.84□□□□□ -1.95
SGF11YPL047W XKS1P42826 600 aa2.84□□□□□ -1.95
SGF11YPL047W RSM26P47141 266 aa2.84□□□□□ -1.95
SGF11YPL047W ENV11P53246 860 aa2.84□□□□□ -1.95
SGF11YPL047W TUB2P02557 457 aaKnown RBP2.83□□□□□ -1.96
SGF11YPL047W CTS1P29029 562 aa2.83□□□□□ -1.96
SGF11YPL047W SQT1P35184 431 aa2.83□□□□□ -1.96
SGF11YPL047W MDJ2P42834 146 aa2.83□□□□□ -1.96
SGF11YPL047W YJL045WP47052 634 aa2.83□□□□□ -1.96
SGF11YPL047W GPI13Q07830 1017 aa2.83□□□□□ -1.96
SGF11YPL047W TAD3Q9URQ3 322 aa2.83□□□□□ -1.96
SGF11YPL047W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SGF11YPL047W SSA1P10591 642 aaKnown RBP2.82□□□□□ -1.96
SGF11YPL047W KAR2P16474 682 aaKnown RBP2.82□□□□□ -1.96
SGF11YPL047W PRE10P21242 288 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SGF11YPL047W CDC3P32457 520 aaKnown RBP2.82□□□□□ -1.96
SGF11YPL047W QNS1P38795 714 aaKnown RBP2.82□□□□□ -1.96
SGF11YPL047W ERP5P38819 212 aa2.82□□□□□ -1.96
SGF11YPL047W VPS53P47061 822 aa2.82□□□□□ -1.96
SGF11YPL047W NUT2Q06213 157 aa2.82□□□□□ -1.96
SGF11YPL047W RSC58Q07979 502 aa2.82□□□□□ -1.96
SGF11YPL047W YBL113CQ7M4S9 792 aa2.82□□□□□ -1.96
SGF11YPL047W FRT1Q99332 602 aa2.82□□□□□ -1.96
SGF11YPL047W YSC84P32793 468 aa2.81□□□□□ -1.96
SGF11YPL047W ADD66P36040 267 aa2.81□□□□□ -1.96
SGF11YPL047W MPT5P39016 859 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
SGF11YPL047W SPT20P50875 604 aa2.81□□□□□ -1.96
SGF11YPL047W SGD1Q06132 899 aa2.81□□□□□ -1.96
SGF11YPL047W PNS1Q12412 539 aa2.81□□□□□ -1.96
SGF11YPL047W COQ4O13525 335 aa2.8□□□□□ -1.96
SGF11YPL047W GCD6P32501 712 aaKnown RBP2.8□□□□□ -1.96
SGF11YPL047W PRP40P33203 583 aaKnown RBP2.8□□□□□ -1.96
SGF11YPL047W CCZ1P38273 704 aa2.8□□□□□ -1.96
SGF11YPL047W LAM1P38851 1228 aa2.8□□□□□ -1.96
SGF11YPL047W TAT2P38967 592 aa2.8□□□□□ -1.96
SGF11YPL047W HNT2P49775 206 aa2.8□□□□□ -1.96
SGF11YPL047W ULP1Q02724 621 aa2.8□□□□□ -1.96
SGF11YPL047W RKM2Q03942 479 aa2.8□□□□□ -1.96
SGF11YPL047W RSB1Q08417 382 aa2.8□□□□□ -1.96
SGF11YPL047W PEX28P38848 579 aa2.79□□□□□ -1.96
SGF11YPL047W MEF2P39677 819 aa2.79□□□□□ -1.96
SGF11YPL047W DAL4Q04895 635 aa2.79□□□□□ -1.96
SGF11YPL047W HAT1Q12341 374 aa2.79□□□□□ -1.96
SGF11YPL047W CYC1P00044 109 aaPredicted RBP2.78□□□□□ -1.96
SGF11YPL047W PUF4P25339 888 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
SGF11YPL047W KIP1P28742 1111 aa2.78□□□□□ -1.96
SGF11YPL047W UGA4P32837 571 aa2.78□□□□□ -1.96
SGF11YPL047W VPS35P34110 944 aa2.78□□□□□ -1.96
SGF11YPL047W SEC26P41810 973 aaKnown RBP2.78□□□□□ -1.96
SGF11YPL047W GCN5Q03330 439 aa2.78□□□□□ -1.96
SGF11YPL047W YDR132CQ03900 495 aa2.78□□□□□ -1.96
SGF11YPL047W OXR1Q08952 273 aa2.78□□□□□ -1.96
SGF11YPL047W YPT53P36019 220 aa2.77□□□□□ -1.97
SGF11YPL047W TNA1P53322 534 aa2.77□□□□□ -1.97
SGF11YPL047W HOS3Q02959 697 aaKnown RBP2.77□□□□□ -1.97
SGF11YPL047W ROT1Q03691 256 aa2.77□□□□□ -1.97
SGF11YPL047W EST2Q06163 884 aa2.77□□□□□ -1.97
SGF11YPL047W RCL1Q08096 367 aaPredicted RBP2.77□□□□□ -1.97
SGF11YPL047W PTC5Q12511 572 aa2.77□□□□□ -1.97
SGF11YPL047W TRM2P33753 639 aa2.76□□□□□ -1.97
SGF11YPL047W RDH54P38086 958 aa2.76□□□□□ -1.97
SGF11YPL047W YHL050CP38721 697 aa2.76□□□□□ -1.97
SGF11YPL047W YHR219WP38900 624 aa2.76□□□□□ -1.97
SGF11YPL047W GPB2P39717 880 aa2.76□□□□□ -1.97
SGF11YPL047W YGL140CP53120 1219 aa2.76□□□□□ -1.97
SGF11YPL047W SLI1P53304 468 aa2.76□□□□□ -1.97
SGF11YPL047W RSM24Q03976 319 aa2.76□□□□□ -1.97
SGF11YPL047W PUS9Q12069 462 aa2.76□□□□□ -1.97
SGF11YPL047W PHO4P07270 312 aaKnown RBP2.75□□□□□ -1.97
SGF11YPL047W DOM34P33309 386 aa2.75□□□□□ -1.97
SGF11YPL047W BAP2P38084 609 aa2.75□□□□□ -1.97
SGF11YPL047W PIK1P39104 1066 aa2.75□□□□□ -1.97
SGF11YPL047W ADI1Q03677 179 aa2.75□□□□□ -1.97
SGF11YPL047W DED1P06634 604 aaKnown RBP2.74□□□□□ -1.97
SGF11YPL047W GEF1P37020 779 aa2.74□□□□□ -1.97
SGF11YPL047W ALG3P38179 458 aa2.74□□□□□ -1.97
SGF11YPL047W RFC5P38251 354 aa2.74□□□□□ -1.97
SGF11YPL047W DAK2P43550 591 aa2.74□□□□□ -1.97
SGF11YPL047W MSE1P48525 536 aa2.74□□□□□ -1.97
SGF11YPL047W URN1Q06525 465 aaKnown RBP2.74□□□□□ -1.97
SGF11YPL047W RXT3Q07458 294 aa2.74□□□□□ -1.97
SGF11YPL047W HEM13P11353 328 aaKnown RBP2.73□□□□□ -1.97
SGF11YPL047W CMP2P14747 604 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms