RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C YGL081WP53156 320 aa5.7□□□□□ -1.5
VPS21YOR089C NOG1Q02892 647 aaKnown RBP5.7□□□□□ -1.5
VPS21YOR089C COBP00163 385 aa5.69□□□□□ -1.5
VPS21YOR089C NPR1P22211 790 aa5.69□□□□□ -1.5
VPS21YOR089C YKL077WP36081 392 aa5.69□□□□□ -1.5
VPS21YOR089C RIM11P38615 370 aa5.69□□□□□ -1.5
VPS21YOR089C GGA2P38817 585 aaKnown RBP5.69□□□□□ -1.5
VPS21YOR089C INP51P40559 946 aaKnown RBP5.69□□□□□ -1.5
VPS21YOR089C PEX13P80667 386 aa5.69□□□□□ -1.5
VPS21YOR089C YLR125WQ12138 136 aa5.69□□□□□ -1.5
VPS21YOR089C SEC23P15303 768 aaKnown RBP5.68□□□□□ -1.5
VPS21YOR089C PRP5P21372 849 aaPredicted RBP5.68□□□□□ -1.5
VPS21YOR089C BAS1P22035 811 aa5.68□□□□□ -1.5
VPS21YOR089C RSC6P25632 483 aa5.68□□□□□ -1.5
VPS21YOR089C COQ2P32378 372 aa5.68□□□□□ -1.5
VPS21YOR089C MRP8P35719 219 aa5.68□□□□□ -1.5
VPS21YOR089C TYW3P53177 273 aa5.68□□□□□ -1.5
VPS21YOR089C VMA4P22203 233 aaKnown RBP5.67□□□□□ -1.5
VPS21YOR089C AGP1P25376 633 aa5.67□□□□□ -1.5
VPS21YOR089C NAM7P30771 971 aaKnown RBP5.67□□□□□ -1.5
VPS21YOR089C ATG14P38270 344 aa5.67□□□□□ -1.5
VPS21YOR089C PAN5P38787 379 aa5.67□□□□□ -1.5
VPS21YOR089C TAT2P38967 592 aa5.67□□□□□ -1.5
VPS21YOR089C NUP82P40368 713 aa5.67□□□□□ -1.5
VPS21YOR089C YGL140CP53120 1219 aa5.67□□□□□ -1.5
VPS21YOR089C SIW14P53965 281 aa5.67□□□□□ -1.5
VPS21YOR089C SHE9Q04172 456 aa5.67□□□□□ -1.5
VPS21YOR089C REC8Q12188 680 aa5.67□□□□□ -1.5
VPS21YOR089C CMR1Q12510 522 aaKnown RBP5.67□□□□□ -1.5
VPS21YOR089C YGR161W-CQ3E744 92 aa5.67□□□□□ -1.5
VPS21YOR089C GAL11P19659 1081 aa5.66□□□□□ -1.5
VPS21YOR089C MSH3P25336 1018 aa5.66□□□□□ -1.5
VPS21YOR089C SBA1P28707 216 aaKnown RBP5.66□□□□□ -1.5
VPS21YOR089C LYP1P32487 611 aa5.66□□□□□ -1.5
VPS21YOR089C DUR3P33413 735 aa5.66□□□□□ -1.5
VPS21YOR089C KAE1P36132 386 aa5.66□□□□□ -1.5
VPS21YOR089C IRR1P40541 1150 aa5.66□□□□□ -1.5
VPS21YOR089C BIO5P53744 561 aaKnown RBP5.66□□□□□ -1.5
VPS21YOR089C SOG2Q08817 791 aa5.66□□□□□ -1.5
VPS21YOR089C FLC1Q08967 793 aa5.66□□□□□ -1.5
VPS21YOR089C TY1B-DR4Q07793 1604 aa5.66□□□□□ -1.5
VPS21YOR089C PHO8P11491 566 aa5.65□□□□□ -1.5
VPS21YOR089C HSP60P19882 572 aaKnown RBP5.65□□□□□ -1.5
VPS21YOR089C AKR1P39010 764 aa5.65□□□□□ -1.5
VPS21YOR089C MNN1P39106 762 aa5.65□□□□□ -1.5
VPS21YOR089C CTH1P47976 325 aa5.65□□□□□ -1.5
VPS21YOR089C YGR125WP53273 1036 aa5.65□□□□□ -1.5
VPS21YOR089C DSE4P53753 1117 aa5.65□□□□□ -1.5
VPS21YOR089C HDA2Q06629 674 aa5.65□□□□□ -1.5
VPS21YOR089C MON2P48563 1636 aaPredicted RBP5.65□□□□□ -1.51
VPS21YOR089C SPA2P23201 1466 aaKnown RBP5.64□□□□□ -1.51
VPS21YOR089C SAF1P38352 637 aa5.64□□□□□ -1.51
VPS21YOR089C MSH4P40965 878 aaPredicted RBP5.64□□□□□ -1.51
VPS21YOR089C HUL4P40985 892 aa5.64□□□□□ -1.51
VPS21YOR089C ERP6P53198 216 aa5.64□□□□□ -1.51
VPS21YOR089C EEB1Q02891 456 aa5.64□□□□□ -1.51
VPS21YOR089C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
VPS21YOR089C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
VPS21YOR089C MED7Q08278 222 aa5.64□□□□□ -1.51
VPS21YOR089C GLO4Q12320 285 aa5.64□□□□□ -1.51
VPS21YOR089C TRP2P00899 507 aaKnown RBP5.63□□□□□ -1.51
VPS21YOR089C PRP9P19736 530 aaKnown RBP5.63□□□□□ -1.51
VPS21YOR089C YKL069WP36088 180 aa5.63□□□□□ -1.51
VPS21YOR089C PBY1P38254 753 aa5.63□□□□□ -1.51
VPS21YOR089C TOS1P38288 455 aa5.63□□□□□ -1.51
VPS21YOR089C YBR184WP38299 523 aa5.63□□□□□ -1.51
VPS21YOR089C FET4P40988 552 aa5.63□□□□□ -1.51
VPS21YOR089C LEM3P42838 414 aa5.63□□□□□ -1.51
VPS21YOR089C MTR4P47047 1073 aaKnown RBP5.63□□□□□ -1.51
VPS21YOR089C GNP1P48813 663 aa5.63□□□□□ -1.51
VPS21YOR089C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
VPS21YOR089C TSR4P25040 408 aa5.62□□□□□ -1.51
VPS21YOR089C THI4P32318 326 aa5.62□□□□□ -1.51
VPS21YOR089C PIN4P34217 668 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
VPS21YOR089C RER2P35196 286 aa5.62□□□□□ -1.51
VPS21YOR089C RSP5P39940 809 aaKnown RBP5.62□□□□□ -1.51
VPS21YOR089C GUP1P53154 560 aa5.62□□□□□ -1.51
VPS21YOR089C YGR130CP53278 816 aa5.62□□□□□ -1.51
VPS21YOR089C EAF1Q06337 982 aa5.62□□□□□ -1.51
VPS21YOR089C PPM2Q08282 695 aa5.62□□□□□ -1.51
VPS21YOR089C SSN2P38931 1420 aa5.62□□□□□ -1.51
VPS21YOR089C TIM23P32897 222 aa5.61□□□□□ -1.51
VPS21YOR089C RDH54P38086 958 aa5.61□□□□□ -1.51
VPS21YOR089C ARL1P38116 183 aaKnown RBP5.61□□□□□ -1.51
VPS21YOR089C YHR020WP38708 688 aaKnown RBP5.61□□□□□ -1.51
VPS21YOR089C POL5P39985 1022 aaKnown RBP5.61□□□□□ -1.51
VPS21YOR089C YJR124CP47159 448 aa5.61□□□□□ -1.51
VPS21YOR089C EST2Q06163 884 aa5.61□□□□□ -1.51
VPS21YOR089C RKM4Q12504 494 aa5.61□□□□□ -1.51
VPS21YOR089C CIT1P00890 479 aa5.6□□□□□ -1.51
VPS21YOR089C HTS1P07263 546 aaKnown RBP5.6□□□□□ -1.51
VPS21YOR089C HVG1P0CE11 249 aa5.6□□□□□ -1.51
VPS21YOR089C ARE1P25628 610 aa5.6□□□□□ -1.51
VPS21YOR089C RPL8BP29453 256 aaKnown RBP5.6□□□□□ -1.51
VPS21YOR089C TOM20P35180 183 aa5.6□□□□□ -1.51
VPS21YOR089C ADD66P36040 267 aa5.6□□□□□ -1.51
VPS21YOR089C VBA5P36172 582 aa5.6□□□□□ -1.51
VPS21YOR089C UTP22P53254 1237 aaPredicted RBP5.6□□□□□ -1.51
VPS21YOR089C NCE103P53615 221 aa5.6□□□□□ -1.51
VPS21YOR089C CHS2P14180 963 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms