RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W NOG1Q02892 647 aaKnown RBP4.52□□□□□ -1.69
PEP12YOR036W UTP5Q04177 643 aaKnown RBP4.52□□□□□ -1.69
PEP12YOR036W RLF2Q12495 606 aa4.52□□□□□ -1.69
PEP12YOR036W TAD3Q9URQ3 322 aa4.52□□□□□ -1.69
PEP12YOR036W SHU2P38957 223 aa4.51□□□□□ -1.69
PEP12YOR036W XKS1P42826 600 aa4.51□□□□□ -1.69
PEP12YOR036W MTR4P47047 1073 aaKnown RBP4.51□□□□□ -1.69
PEP12YOR036W YJL045WP47052 634 aa4.51□□□□□ -1.69
PEP12YOR036W HRK1Q08732 759 aaKnown RBP4.51□□□□□ -1.69
PEP12YOR036W SRO9P25567 434 aaKnown RBP4.49□□□□□ -1.69
PEP12YOR036W NOC3Q07896 663 aaPredicted RBP4.49□□□□□ -1.69
PEP12YOR036W PNS1Q12412 539 aa4.49□□□□□ -1.69
PEP12YOR036W MSH3P25336 1018 aa4.48□□□□□ -1.69
PEP12YOR036W HSE1P38753 452 aa4.48□□□□□ -1.69
PEP12YOR036W TAT2P38967 592 aa4.48□□□□□ -1.69
PEP12YOR036W SPT20P50875 604 aa4.48□□□□□ -1.69
PEP12YOR036W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69 RIP-Chip
PEP12YOR036W FRT1Q99332 602 aa4.48□□□□□ -1.69
PEP12YOR036W GRS1P38088 690 aaKnown RBP4.47□□□□□ -1.69
PEP12YOR036W YNR063WP53749 607 aa4.47□□□□□ -1.69
PEP12YOR036W YCS4Q06156 1176 aa4.47□□□□□ -1.69
PEP12YOR036W RSC58Q07979 502 aa4.47□□□□□ -1.69
PEP12YOR036W RCL1Q08096 367 aaPredicted RBP4.47□□□□□ -1.69
PEP12YOR036W UGA4P32837 571 aa4.46□□□□□ -1.7
PEP12YOR036W QNS1P38795 714 aaKnown RBP4.46□□□□□ -1.7
PEP12YOR036W LAM1P38851 1228 aa4.46□□□□□ -1.7
PEP12YOR036W MPT5P39016 859 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
PEP12YOR036W MEF2P39677 819 aa4.46□□□□□ -1.7
PEP12YOR036W MDJ2P42834 146 aa4.46□□□□□ -1.7
PEP12YOR036W PEX13P80667 386 aa4.46□□□□□ -1.7
PEP12YOR036W RPL34AP87262 121 aaPredicted RBP4.46□□□□□ -1.7
PEP12YOR036W GCN5Q03330 439 aa4.46□□□□□ -1.7
PEP12YOR036W SGD1Q06132 899 aa4.46□□□□□ -1.7
PEP12YOR036W LAP2Q10740 671 aa4.46□□□□□ -1.7
PEP12YOR036W SPS1P08458 490 aa4.45□□□□□ -1.7
PEP12YOR036W YSC84P32793 468 aa4.45□□□□□ -1.7
PEP12YOR036W NUT2Q06213 157 aa4.45□□□□□ -1.7
PEP12YOR036W SAM37P50110 327 aa4.44□□□□□ -1.7
PEP12YOR036W VMA4P22203 233 aaKnown RBP4.43□□□□□ -1.7
PEP12YOR036W ERP5P38819 212 aa4.43□□□□□ -1.7
PEP12YOR036W SLI1P53304 468 aa4.43□□□□□ -1.7
PEP12YOR036W CYC1P00044 109 aaPredicted RBP4.42□□□□□ -1.7
PEP12YOR036W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
PEP12YOR036W ENV11P53246 860 aa4.42□□□□□ -1.7
PEP12YOR036W PLB2Q03674 706 aa4.42□□□□□ -1.7
PEP12YOR036W NBA1Q08229 501 aaKnown RBP4.42□□□□□ -1.7
PEP12YOR036W PUS9Q12069 462 aa4.42□□□□□ -1.7
PEP12YOR036W PRP40P33203 583 aaKnown RBP4.41□□□□□ -1.7
PEP12YOR036W RDH54P38086 958 aa4.41□□□□□ -1.7
PEP12YOR036W CIC1P38779 376 aaKnown RBP4.41□□□□□ -1.7
PEP12YOR036W RSM26P47141 266 aa4.41□□□□□ -1.7
PEP12YOR036W ROT1Q03691 256 aa4.41□□□□□ -1.7
PEP12YOR036W DUS4Q06063 367 aa4.41□□□□□ -1.7
PEP12YOR036W YOR352WQ08816 343 aa4.41□□□□□ -1.7
PEP12YOR036W HEM13P11353 328 aaKnown RBP4.4□□□□□ -1.71
PEP12YOR036W YPT53P36019 220 aa4.4□□□□□ -1.71
PEP12YOR036W ATG14P38270 344 aa4.4□□□□□ -1.71
PEP12YOR036W VPS53P47061 822 aa4.4□□□□□ -1.71
PEP12YOR036W ULP1Q02724 621 aa4.4□□□□□ -1.71
PEP12YOR036W RKM2Q03942 479 aa4.4□□□□□ -1.71
PEP12YOR036W SPO21Q12411 609 aa4.4□□□□□ -1.71
PEP12YOR036W COQ4O13525 335 aa4.39□□□□□ -1.71
PEP12YOR036W KIP1P28742 1111 aa4.39□□□□□ -1.71
PEP12YOR036W AFG2P32794 780 aa4.39□□□□□ -1.71
PEP12YOR036W TRM2P33753 639 aa4.39□□□□□ -1.71
PEP12YOR036W ADD66P36040 267 aa4.39□□□□□ -1.71
PEP12YOR036W BAP2P38084 609 aa4.39□□□□□ -1.71
PEP12YOR036W PEX28P38848 579 aa4.39□□□□□ -1.71
PEP12YOR036W GPB2P39717 880 aa4.39□□□□□ -1.71
PEP12YOR036W SEC26P41810 973 aaKnown RBP4.39□□□□□ -1.71
PEP12YOR036W YBL113CQ7M4S9 792 aa4.39□□□□□ -1.71
PEP12YOR036W MSE1P48525 536 aa4.38□□□□□ -1.71
PEP12YOR036W HNT2P49775 206 aa4.38□□□□□ -1.71
PEP12YOR036W TOS4Q06266 489 aa4.38□□□□□ -1.71
PEP12YOR036W SRM1P21827 482 aa4.37□□□□□ -1.71
PEP12YOR036W PUF4P25339 888 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
PEP12YOR036W DOM34P33309 386 aa4.37□□□□□ -1.71
PEP12YOR036W SQT1P35184 431 aa4.37□□□□□ -1.71
PEP12YOR036W CCZ1P38273 704 aa4.37□□□□□ -1.71
PEP12YOR036W YGL140CP53120 1219 aa4.37□□□□□ -1.71
PEP12YOR036W SNF5P18480 905 aa4.36□□□□□ -1.71
PEP12YOR036W HCM1P25364 564 aa4.36□□□□□ -1.71
PEP12YOR036W CDC20P26309 610 aa4.36□□□□□ -1.71
PEP12YOR036W LST4P34239 828 aa4.36□□□□□ -1.71
PEP12YOR036W TNA1P53322 534 aa4.36□□□□□ -1.71
PEP12YOR036W SUN4P53616 420 aa4.36□□□□□ -1.71
PEP12YOR036W DAL4Q04895 635 aa4.36□□□□□ -1.71
PEP12YOR036W GAL10P04397 699 aa4.35□□□□□ -1.71
PEP12YOR036W CDC6P09119 513 aa4.35□□□□□ -1.71
PEP12YOR036W PIK1P39104 1066 aa4.35□□□□□ -1.71
PEP12YOR036W HOS3Q02959 697 aaKnown RBP4.35□□□□□ -1.71
PEP12YOR036W TMA10Q06177 86 aa4.35□□□□□ -1.71
PEP12YOR036W KAR2P16474 682 aaKnown RBP4.34□□□□□ -1.71
PEP12YOR036W EST2Q06163 884 aa4.34□□□□□ -1.71
PEP12YOR036W RSB1Q08417 382 aa4.34□□□□□ -1.71
PEP12YOR036W NTO1Q12311 748 aa4.34□□□□□ -1.71
PEP12YOR036W RIB2Q12362 591 aaKnown RBP4.34□□□□□ -1.71
PEP12YOR036W PHO4P07270 312 aaKnown RBP4.33□□□□□ -1.72
PEP12YOR036W CMP2P14747 604 aa4.33□□□□□ -1.72
PEP12YOR036W SEC23P15303 768 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms