RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS2	YOL047C	YGR053C	P53234	283 aa		4.23	□□□□□ -1.73
LDS2	YOL047C	YPR097W	Q06839	1073 aa		4.23	□□□□□ -1.73
LDS2	YOL047C	ALR1	Q08269	859 aa		4.23	□□□□□ -1.73
LDS2	YOL047C	GEA2	P39993	1459 aa	Known RBP	4.23	□□□□□ -1.73
LDS2	YOL047C	GCN2	P15442	1659 aa		4.22	□□□□□ -1.73
LDS2	YOL047C	GCR1	P07261	785 aa		4.22	□□□□□ -1.73
LDS2	YOL047C	RPL8B	P29453	256 aa	Known RBP	4.22	□□□□□ -1.73
LDS2	YOL047C	MCM5	P29496	775 aa	Known RBP	4.22	□□□□□ -1.73
LDS2	YOL047C	ARL1	P38116	183 aa	Known RBP	4.22	□□□□□ -1.73
LDS2	YOL047C	CIC1	P38779	376 aa	Known RBP	4.22	□□□□□ -1.73
LDS2	YOL047C	YAP1801	P38856	637 aa		4.22	□□□□□ -1.73
LDS2	YOL047C	SMC3	P47037	1230 aa		4.22	□□□□□ -1.73
LDS2	YOL047C	YGR021W	P53212	290 aa		4.22	□□□□□ -1.73
LDS2	YOL047C	ENV11	P53246	860 aa		4.22	□□□□□ -1.73
LDS2	YOL047C	BSC2	Q05611	235 aa		4.22	□□□□□ -1.73
LDS2	YOL047C	YLR346C	Q06139	101 aa		4.22	□□□□□ -1.73
LDS2	YOL047C	REC8	Q12188	680 aa		4.22	□□□□□ -1.73
LDS2	YOL047C	HIF1	Q12373	385 aa		4.22	□□□□□ -1.73
LDS2	YOL047C	OSH2	Q12451	1283 aa		4.22	□□□□□ -1.73
LDS2	YOL047C	TMA7	Q3E764	64 aa	Known RBP	4.22	□□□□□ -1.73
LDS2	YOL047C	ATG2	P53855	1592 aa		4.22	□□□□□ -1.73
LDS2	YOL047C	TRM3	Q07527	1436 aa		4.21	□□□□□ -1.73
LDS2	YOL047C	MPH2	P0CD99	609 aa		4.21	□□□□□ -1.74
LDS2	YOL047C	HSP60	P19882	572 aa	Known RBP	4.21	□□□□□ -1.74
LDS2	YOL047C	ARE1	P25628	610 aa		4.21	□□□□□ -1.74
LDS2	YOL047C	ABD1	P32783	436 aa	Predicted RBP	4.21	□□□□□ -1.74
LDS2	YOL047C	PRP40	P33203	583 aa	Known RBP	4.21	□□□□□ -1.74
LDS2	YOL047C	DJP1	P40564	432 aa		4.21	□□□□□ -1.74
LDS2	YOL047C	GPP1	P41277	250 aa	Known RBP	4.21	□□□□□ -1.74
LDS2	YOL047C	YNL034W	P53963	612 aa		4.21	□□□□□ -1.74
LDS2	YOL047C	YNL018C	P53976	612 aa		4.21	□□□□□ -1.74
LDS2	YOL047C	TGL2	P54857	326 aa		4.21	□□□□□ -1.74
LDS2	YOL047C	EEB1	Q02891	456 aa		4.21	□□□□□ -1.74
LDS2	YOL047C	OPT2	Q06593	877 aa		4.21	□□□□□ -1.74
LDS2	YOL047C	ATG20	Q07528	640 aa		4.21	□□□□□ -1.74
LDS2	YOL047C	ERP4	Q12450	207 aa		4.21	□□□□□ -1.74
LDS2	YOL047C	SNT2	P53127	1403 aa		4.21	□□□□□ -1.74
LDS2	YOL047C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
LDS2	YOL047C	MSH2	P25847	964 aa		4.2	□□□□□ -1.74
LDS2	YOL047C	SPC110	P32380	944 aa		4.2	□□□□□ -1.74
LDS2	YOL047C	TOA1	P32773	286 aa		4.2	□□□□□ -1.74
LDS2	YOL047C	BET3	P36149	193 aa		4.2	□□□□□ -1.74
LDS2	YOL047C	PIC2	P40035	300 aa		4.2	□□□□□ -1.74
LDS2	YOL047C	MON1	P53129	644 aa		4.2	□□□□□ -1.74
LDS2	YOL047C	GPG1	P53130	126 aa		4.2	□□□□□ -1.74
LDS2	YOL047C	APP1	P53933	587 aa		4.2	□□□□□ -1.74
LDS2	YOL047C	VMS1	Q04311	632 aa	Known RBP	4.2	□□□□□ -1.74
LDS2	YOL047C	CAT8	P39113	1433 aa		4.2	□□□□□ -1.74
LDS2	YOL047C	RNA1	P11745	407 aa	Known RBP	4.19	□□□□□ -1.74
LDS2	YOL047C	MRPL33	P20084	86 aa		4.19	□□□□□ -1.74
LDS2	YOL047C	VAC17	P25591	423 aa		4.19	□□□□□ -1.74
LDS2	YOL047C	NFU1	P32860	256 aa		4.19	□□□□□ -1.74
LDS2	YOL047C	TFC4	P33339	1025 aa		4.19	□□□□□ -1.74
LDS2	YOL047C	MTC2	P34246	357 aa		4.19	□□□□□ -1.74
LDS2	YOL047C	IES5	P40060	125 aa		4.19	□□□□□ -1.74
LDS2	YOL047C	PIL1	P53252	339 aa	Known RBP	4.19	□□□□□ -1.74
LDS2	YOL047C	COG6	P53959	839 aa		4.19	□□□□□ -1.74
LDS2	YOL047C	EAF1	Q06337	982 aa		4.19	□□□□□ -1.74
LDS2	YOL047C	MRL1	Q06815	381 aa		4.19	□□□□□ -1.74
LDS2	YOL047C	THI73	Q07904	523 aa		4.19	□□□□□ -1.74
LDS2	YOL047C	FMP25	Q08023	583 aa		4.19	□□□□□ -1.74
LDS2	YOL047C	SNU66	Q12420	587 aa	Predicted RBP	4.19	□□□□□ -1.74
LDS2	YOL047C	APA1	P16550	321 aa	Known RBP	4.18	□□□□□ -1.74
LDS2	YOL047C	NPR1	P22211	790 aa		4.18	□□□□□ -1.74
LDS2	YOL047C	MEF1	P25039	761 aa		4.18	□□□□□ -1.74
LDS2	YOL047C	UGA3	P26370	528 aa		4.18	□□□□□ -1.74
LDS2	YOL047C	DEF1	P35732	738 aa	Known RBP	4.18	□□□□□ -1.74
LDS2	YOL047C	SEA4	P38164	1038 aa		4.18	□□□□□ -1.74
LDS2	YOL047C	HXT5	P38695	592 aa		4.18	□□□□□ -1.74
LDS2	YOL047C	RAD26	P40352	1085 aa		4.18	□□□□□ -1.74
LDS2	YOL047C	HXT8	P40886	569 aa		4.18	□□□□□ -1.74
LDS2	YOL047C	IES1	P43579	692 aa		4.18	□□□□□ -1.74
LDS2	YOL047C	PFD1	P46988	109 aa		4.18	□□□□□ -1.74
LDS2	YOL047C	HSV2	P50079	448 aa	Predicted RBP	4.18	□□□□□ -1.74
LDS2	YOL047C	UME1	Q03010	460 aa		4.18	□□□□□ -1.74
LDS2	YOL047C	HPF1	Q05164	967 aa		4.18	□□□□□ -1.74
LDS2	YOL047C	SPO75	Q07798	868 aa		4.18	□□□□□ -1.74
LDS2	YOL047C	FAP7	Q12055	197 aa	Predicted RBP	4.18	□□□□□ -1.74
LDS2	YOL047C	MCD1	Q12158	566 aa		4.18	□□□□□ -1.74
LDS2	YOL047C	PGI1	P12709	554 aa	Known RBP	4.17	□□□□□ -1.74
LDS2	YOL047C	DAT1	P13483	248 aa	Known RBP	4.17	□□□□□ -1.74
LDS2	YOL047C	VMA3	P25515	160 aa		4.17	□□□□□ -1.74
LDS2	YOL047C	UTR2	P32623	467 aa		4.17	□□□□□ -1.74
LDS2	YOL047C	MOT2	P34909	587 aa	Known RBP	4.17	□□□□□ -1.74
LDS2	YOL047C	VBA5	P36172	582 aa		4.17	□□□□□ -1.74
LDS2	YOL047C	MAL31	P38156	614 aa		4.17	□□□□□ -1.74
LDS2	YOL047C	EXO84	P38261	753 aa		4.17	□□□□□ -1.74
LDS2	YOL047C	RAD55	P38953	406 aa		4.17	□□□□□ -1.74
LDS2	YOL047C	HOS4	P40480	1083 aa		4.17	□□□□□ -1.74
LDS2	YOL047C	XKS1	P42826	600 aa		4.17	□□□□□ -1.74
LDS2	YOL047C	PTK2	P47116	818 aa	Known RBP	4.17	□□□□□ -1.74
LDS2	YOL047C	PEX14	P53112	341 aa		4.17	□□□□□ -1.74
LDS2	YOL047C	MDM1	Q01846	1127 aa		4.17	□□□□□ -1.74
LDS2	YOL047C	ULP1	Q02724	621 aa		4.17	□□□□□ -1.74
LDS2	YOL047C	YPL109C	Q02981	657 aa		4.17	□□□□□ -1.74
LDS2	YOL047C	YLR225C	Q05948	407 aa	Known RBP	4.17	□□□□□ -1.74
LDS2	YOL047C	SST2	P11972	698 aa	Known RBP	4.16	□□□□□ -1.74
LDS2	YOL047C	SUI2	P20459	304 aa	Known RBP	4.16	□□□□□ -1.74
LDS2	YOL047C	EUG1	P32474	517 aa		4.16	□□□□□ -1.74
LDS2	YOL047C	SCT1	P32784	759 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms