RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeast

Gene SWS2, Length 432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWS2	YNL081C	FAA3	P39002	694 aa		4.87	□□□□□ -1.63
SWS2	YNL081C	YGL140C	P53120	1219 aa		4.87	□□□□□ -1.63
SWS2	YNL081C	RKM2	Q03942	479 aa		4.87	□□□□□ -1.63
SWS2	YNL081C	TOS4	Q06266	489 aa		4.86	□□□□□ -1.63
SWS2	YNL081C	MAG2	Q06436	670 aa	Known RBP	4.86	□□□□□ -1.63
SWS2	YNL081C	RAD2	P07276	1031 aa		4.85	□□□□□ -1.63
SWS2	YNL081C	SEC23	P15303	768 aa	Known RBP	4.85	□□□□□ -1.63
SWS2	YNL081C	RDH54	P38086	958 aa		4.85	□□□□□ -1.63
SWS2	YNL081C	RPS26A	P39938	119 aa	Known RBP	4.85	□□□□□ -1.63
SWS2	YNL081C	RPS26B	P39939	119 aa	Known RBP	4.85	□□□□□ -1.63
SWS2	YNL081C	VPS53	P47061	822 aa		4.85	□□□□□ -1.63
SWS2	YNL081C	CTH1	P47976	325 aa		4.85	□□□□□ -1.63
SWS2	YNL081C	YNR063W	P53749	607 aa		4.85	□□□□□ -1.63
SWS2	YNL081C	EST2	Q06163	884 aa		4.85	□□□□□ -1.63
SWS2	YNL081C	HRK1	Q08732	759 aa	Known RBP	4.85	□□□□□ -1.63
SWS2	YNL081C	ATE1	P16639	503 aa		4.84	□□□□□ -1.63
SWS2	YNL081C	ADP1	P25371	1049 aa		4.84	□□□□□ -1.63
SWS2	YNL081C	YJR107W	P47145	328 aa		4.84	□□□□□ -1.63
SWS2	YNL081C	TPP1	Q03796	238 aa		4.84	□□□□□ -1.63
SWS2	YNL081C	YLR257W	Q06146	321 aa	Known RBP	4.84	□□□□□ -1.63
SWS2	YNL081C	PUS7	Q08647	676 aa	Known RBP	4.84	□□□□□ -1.63
SWS2	YNL081C	TRE1	Q08919	783 aa		4.84	□□□□□ -1.63
SWS2	YNL081C	YVC1	Q12324	675 aa		4.84	□□□□□ -1.63
SWS2	YNL081C	GCD1	P09032	578 aa	Predicted RBP	4.83	□□□□□ -1.64
SWS2	YNL081C	CYC8	P14922	966 aa		4.83	□□□□□ -1.64
SWS2	YNL081C	PIC2	P40035	300 aa		4.83	□□□□□ -1.64
SWS2	YNL081C	OYE3	P41816	400 aa	Predicted RBP	4.83	□□□□□ -1.64
SWS2	YNL081C	EAR1	Q03212	550 aa		4.83	□□□□□ -1.64
SWS2	YNL081C	RSA3	Q05942	220 aa	Known RBP	4.83	□□□□□ -1.64
SWS2	YNL081C	QNS1	P38795	714 aa	Known RBP	4.82	□□□□□ -1.64
SWS2	YNL081C	ENT3	P47160	408 aa		4.82	□□□□□ -1.64
SWS2	YNL081C	SDH1	Q00711	640 aa		4.82	□□□□□ -1.64
SWS2	YNL081C	RMD1	Q03441	430 aa		4.82	□□□□□ -1.64
SWS2	YNL081C	PEP7	P32609	515 aa		4.81	□□□□□ -1.64
SWS2	YNL081C	SEC8	P32855	1065 aa		4.81	□□□□□ -1.64
SWS2	YNL081C	ESF1	Q06344	628 aa	Known RBP	4.81	□□□□□ -1.64
SWS2	YNL081C	RRP15	Q06511	250 aa	Predicted RBP	4.81	□□□□□ -1.64
SWS2	YNL081C	MCM2	P29469	868 aa		4.8	□□□□□ -1.64
SWS2	YNL081C	SSY1	Q03770	852 aa		4.8	□□□□□ -1.64
SWS2	YNL081C	HEM13	P11353	328 aa	Known RBP	4.79	□□□□□ -1.64
SWS2	YNL081C	RAD27	P26793	382 aa		4.79	□□□□□ -1.64
SWS2	YNL081C	PRO1	P32264	428 aa		4.79	□□□□□ -1.64
SWS2	YNL081C	MDL2	P33311	773 aa		4.79	□□□□□ -1.64
SWS2	YNL081C	YHL012W	P38709	493 aa		4.79	□□□□□ -1.64
SWS2	YNL081C	PEX7	P39108	375 aa		4.79	□□□□□ -1.64
SWS2	YNL081C	ECL1	P48235	211 aa		4.79	□□□□□ -1.64
SWS2	YNL081C	ORC3	P54790	616 aa		4.79	□□□□□ -1.64
SWS2	YNL081C	PTC5	Q12511	572 aa		4.79	□□□□□ -1.64
SWS2	YNL081C	DED1	P06634	604 aa	Known RBP	4.78	□□□□□ -1.64
SWS2	YNL081C	SRO9	P25567	434 aa	Known RBP	4.78	□□□□□ -1.64
SWS2	YNL081C	PTC7	P38797	343 aa		4.78	□□□□□ -1.64
SWS2	YNL081C	IRC24	P40580	263 aa		4.78	□□□□□ -1.64
SWS2	YNL081C	AVT1	P47082	602 aa		4.78	□□□□□ -1.64
SWS2	YNL081C	FOL2	P51601	243 aa	Known RBP	4.78	□□□□□ -1.64
SWS2	YNL081C	SIW14	P53965	281 aa		4.78	□□□□□ -1.64
SWS2	YNL081C	HDA2	Q06629	674 aa		4.78	□□□□□ -1.64
SWS2	YNL081C	MRL1	Q06815	381 aa		4.78	□□□□□ -1.64
SWS2	YNL081C	HSP78	P33416	811 aa		4.77	□□□□□ -1.65
SWS2	YNL081C	POL12	P38121	705 aa	Predicted RBP	4.77	□□□□□ -1.65
SWS2	YNL081C	NMD3	P38861	518 aa	Known RBP	4.77	□□□□□ -1.65
SWS2	YNL081C	OYE2	Q03558	400 aa	Known RBP	4.77	□□□□□ -1.65
SWS2	YNL081C	SPR28	Q04921	423 aa		4.77	□□□□□ -1.65
SWS2	YNL081C	NBA1	Q08229	501 aa	Known RBP	4.77	□□□□□ -1.65
SWS2	YNL081C	YPL260W	Q08977	551 aa		4.77	□□□□□ -1.65
SWS2	YNL081C	DFG16	Q99234	619 aa		4.77	□□□□□ -1.65
SWS2	YNL081C	COQ4	O13525	335 aa		4.76	□□□□□ -1.65
SWS2	YNL081C	GCR1	P07261	785 aa		4.76	□□□□□ -1.65
SWS2	YNL081C	KIP1	P28742	1111 aa		4.76	□□□□□ -1.65
SWS2	YNL081C	YSC84	P32793	468 aa		4.76	□□□□□ -1.65
SWS2	YNL081C	ALG3	P38179	458 aa		4.76	□□□□□ -1.65
SWS2	YNL081C	FYV10	P40492	516 aa		4.76	□□□□□ -1.65
SWS2	YNL081C	GTS1	P40956	396 aa		4.76	□□□□□ -1.65
SWS2	YNL081C	YJL045W	P47052	634 aa		4.76	□□□□□ -1.65
SWS2	YNL081C	ROD1	Q02805	837 aa		4.76	□□□□□ -1.65
SWS2	YNL081C	RTT10	Q08924	1013 aa		4.76	□□□□□ -1.65
SWS2	YNL081C	TMA46	Q12000	345 aa	Known RBP	4.76	□□□□□ -1.65
SWS2	YNL081C	SAM35	P14693	329 aa		4.75	□□□□□ -1.65
SWS2	YNL081C	NAP1	P25293	417 aa	Known RBP	4.75	□□□□□ -1.65
SWS2	YNL081C	AFG2	P32794	780 aa		4.75	□□□□□ -1.65
SWS2	YNL081C	TNA1	P53322	534 aa		4.75	□□□□□ -1.65
SWS2	YNL081C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
SWS2	YNL081C	HOS3	Q02959	697 aa	Known RBP	4.75	□□□□□ -1.65
SWS2	YNL081C	MKK2	P32491	506 aa		4.74	□□□□□ -1.65
SWS2	YNL081C	ELM1	P32801	640 aa		4.74	□□□□□ -1.65
SWS2	YNL081C	CCZ1	P38273	704 aa		4.74	□□□□□ -1.65
SWS2	YNL081C	RPN3	P40016	523 aa	Known RBP	4.74	□□□□□ -1.65
SWS2	YNL081C	AOS1	Q06624	347 aa		4.74	□□□□□ -1.65
SWS2	YNL081C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
SWS2	YNL081C	SYP1	P25623	870 aa	Known RBP	4.73	□□□□□ -1.65
SWS2	YNL081C	PET112	P33893	541 aa		4.73	□□□□□ -1.65
SWS2	YNL081C	LRG1	P35688	1017 aa		4.73	□□□□□ -1.65
SWS2	YNL081C	MNR2	P35724	969 aa		4.73	□□□□□ -1.65
SWS2	YNL081C	SEA4	P38164	1038 aa		4.73	□□□□□ -1.65
SWS2	YNL081C	RGD1	P38339	666 aa		4.73	□□□□□ -1.65
SWS2	YNL081C	NIT1	P40447	199 aa		4.73	□□□□□ -1.65
SWS2	YNL081C	ENV11	P53246	860 aa		4.73	□□□□□ -1.65
SWS2	YNL081C	RSB1	Q08417	382 aa		4.73	□□□□□ -1.65
SWS2	YNL081C	LPX1	Q12405	387 aa	Known RBP	4.73	□□□□□ -1.65
SWS2	YNL081C	AIM26	P32858	118 aa		4.72	□□□□□ -1.65
SWS2	YNL081C	HXT13	P39924	564 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms