RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeastyeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT21YMR179W YCR015CP25616 317 aa2.95□□□□□ -1.94
SPT21YMR179W GCD6P32501 712 aaKnown RBP2.95□□□□□ -1.94
SPT21YMR179W PPX1P38698 397 aa2.95□□□□□ -1.94
SPT21YMR179W XKS1P42826 600 aa2.95□□□□□ -1.94
SPT21YMR179W RSA3Q05942 220 aaKnown RBP2.95□□□□□ -1.94
SPT21YMR179W NMD3P38861 518 aaKnown RBP2.94□□□□□ -1.94
SPT21YMR179W GTS1P40956 396 aa2.94□□□□□ -1.94
SPT21YMR179W PEX13P80667 386 aa2.94□□□□□ -1.94
SPT21YMR179W DAL4Q04895 635 aa2.94□□□□□ -1.94
SPT21YMR179W WHI5Q12416 295 aa2.94□□□□□ -1.94
SPT21YMR179W PRP6P19735 899 aaPredicted RBP2.94□□□□□ -1.94
SPT21YMR179W ESC8Q08119 714 aa2.94□□□□□ -1.94
SPT21YMR179W KAR2P16474 682 aaKnown RBP2.93□□□□□ -1.94
SPT21YMR179W YHL012WP38709 493 aa2.93□□□□□ -1.94
SPT21YMR179W PEX28P38848 579 aa2.93□□□□□ -1.94
SPT21YMR179W TAF1P46677 1066 aa2.93□□□□□ -1.94
SPT21YMR179W MSC6Q08818 692 aaKnown RBP2.93□□□□□ -1.94
SPT21YMR179W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
SPT21YMR179W HSE1P38753 452 aa2.93□□□□□ -1.94
SPT21YMR179W STM1P39015 273 aaKnown RBP2.93□□□□□ -1.94
SPT21YMR179W RSM26P47141 266 aa2.93□□□□□ -1.94
SPT21YMR179W YGL140CP53120 1219 aa2.93□□□□□ -1.94
SPT21YMR179W MRPL22P53881 309 aa2.93□□□□□ -1.94
SPT21YMR179W YPL109CQ02981 657 aa2.93□□□□□ -1.94
SPT21YMR179W RKM2Q03942 479 aa2.93□□□□□ -1.94
SPT21YMR179W LAP2Q10740 671 aa2.93□□□□□ -1.94
SPT21YMR179W MDL2P33311 773 aa2.92□□□□□ -1.94
SPT21YMR179W QNS1P38795 714 aaKnown RBP2.92□□□□□ -1.94
SPT21YMR179W YJL045WP47052 634 aa2.92□□□□□ -1.94
SPT21YMR179W ADI1Q03677 179 aa2.92□□□□□ -1.94
SPT21YMR179W HRK1Q08732 759 aaKnown RBP2.92□□□□□ -1.94
SPT21YMR179W HXK1P04806 485 aaKnown RBP2.91□□□□□ -1.94
SPT21YMR179W SEC23P15303 768 aaKnown RBP2.91□□□□□ -1.94
SPT21YMR179W SRO9P25567 434 aaKnown RBP2.91□□□□□ -1.94
SPT21YMR179W SQT1P35184 431 aa2.91□□□□□ -1.94
SPT21YMR179W ADD66P36040 267 aa2.91□□□□□ -1.94
SPT21YMR179W ETP1P38748 585 aaKnown RBP2.91□□□□□ -1.94
SPT21YMR179W FAA3P39002 694 aa2.91□□□□□ -1.94
SPT21YMR179W AFG2P32794 780 aa2.91□□□□□ -1.94
SPT21YMR179W AIM3P38266 947 aaKnown RBP2.91□□□□□ -1.94
SPT21YMR179W YNR063WP53749 607 aa2.91□□□□□ -1.94
SPT21YMR179W YKL222CP35995 705 aa2.9□□□□□ -1.94
SPT21YMR179W FLR1P38124 548 aa2.9□□□□□ -1.94
SPT21YMR179W PIC2P40035 300 aa2.9□□□□□ -1.94
SPT21YMR179W OXR1Q08952 273 aa2.9□□□□□ -1.94
SPT21YMR179W YSC84P32793 468 aa2.9□□□□□ -1.95
SPT21YMR179W VPS53P47061 822 aa2.9□□□□□ -1.95
SPT21YMR179W RIM8P53179 542 aa2.9□□□□□ -1.95
SPT21YMR179W SOD2P00447 233 aa2.89□□□□□ -1.95
SPT21YMR179W GIP4P39732 760 aa2.89□□□□□ -1.95
SPT21YMR179W RSC58Q07979 502 aa2.89□□□□□ -1.95
SPT21YMR179W RCL1Q08096 367 aaPredicted RBP2.89□□□□□ -1.95
SPT21YMR179W AIM26P32858 118 aa2.89□□□□□ -1.95
SPT21YMR179W RPT1P33299 467 aaKnown RBP2.89□□□□□ -1.95
SPT21YMR179W BAP2P38084 609 aa2.89□□□□□ -1.95
SPT21YMR179W ATG14P38270 344 aa2.89□□□□□ -1.95
SPT21YMR179W EST2Q06163 884 aa2.89□□□□□ -1.95
SPT21YMR179W YPL277CQ08989 487 aa2.89□□□□□ -1.95
SPT21YMR179W KIP1P28742 1111 aa2.88□□□□□ -1.95
SPT21YMR179W HDA2Q06629 674 aa2.88□□□□□ -1.95
SPT21YMR179W IPL1P38991 367 aa2.88□□□□□ -1.95
SPT21YMR179W SNO2P53823 222 aa2.88□□□□□ -1.95
SPT21YMR179W SEN54Q02825 467 aaPredicted RBP2.88□□□□□ -1.95
SPT21YMR179W RPS13P05756 151 aaKnown RBP2.87□□□□□ -1.95
SPT21YMR179W TAF13P11747 167 aa2.87□□□□□ -1.95
SPT21YMR179W SEC20P28791 383 aa2.87□□□□□ -1.95
SPT21YMR179W THI12P42883 340 aa2.87□□□□□ -1.95
SPT21YMR179W THI5P43534 340 aa2.87□□□□□ -1.95
SPT21YMR179W THI11P47183 340 aa2.87□□□□□ -1.95
SPT21YMR179W FOL2P51601 243 aaKnown RBP2.87□□□□□ -1.95
SPT21YMR179W YDR132CQ03900 495 aa2.87□□□□□ -1.95
SPT21YMR179W THI13Q07748 340 aa2.87□□□□□ -1.95
SPT21YMR179W SNF5P18480 905 aa2.86□□□□□ -1.95
SPT21YMR179W TOD6P34219 525 aa2.86□□□□□ -1.95
SPT21YMR179W ALG3P38179 458 aa2.86□□□□□ -1.95
SPT21YMR179W YGR122WP53272 402 aa2.86□□□□□ -1.95
SPT21YMR179W PTC5Q12511 572 aa2.86□□□□□ -1.95
SPT21YMR179W SPS1P08458 490 aa2.86□□□□□ -1.95
SPT21YMR179W PRE9P23638 258 aaKnown RBP2.86□□□□□ -1.95
SPT21YMR179W ABZ1P37254 787 aaPredicted RBP2.86□□□□□ -1.95
SPT21YMR179W GPB2P39717 880 aa2.86□□□□□ -1.95
SPT21YMR179W ENV11P53246 860 aa2.86□□□□□ -1.95
SPT21YMR179W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
SPT21YMR179W HOS3Q02959 697 aaKnown RBP2.86□□□□□ -1.95
SPT21YMR179W NBA1Q08229 501 aaKnown RBP2.86□□□□□ -1.95
SPT21YMR179W COQ4O13525 335 aa2.85□□□□□ -1.95
SPT21YMR179W HXT13P39924 564 aa2.85□□□□□ -1.95
SPT21YMR179W RPN3P40016 523 aaKnown RBP2.85□□□□□ -1.95
SPT21YMR179W GNP1P48813 663 aa2.85□□□□□ -1.95
SPT21YMR179W HXT17P53631 564 aa2.85□□□□□ -1.95
SPT21YMR179W HXT15P54854 567 aa2.85□□□□□ -1.95
SPT21YMR179W MCD1Q12158 566 aa2.85□□□□□ -1.95
SPT21YMR179W DED1P06634 604 aaKnown RBP2.85□□□□□ -1.95
SPT21YMR179W PRE10P21242 288 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
SPT21YMR179W PIK1P39104 1066 aa2.85□□□□□ -1.95
SPT21YMR179W TNA1P53322 534 aa2.85□□□□□ -1.95
SPT21YMR179W RAT1Q02792 1006 aaKnown RBP2.85□□□□□ -1.95
SPT21YMR179W ROD1Q02805 837 aa2.85□□□□□ -1.95
SPT21YMR179W CYC8P14922 966 aa2.84□□□□□ -1.95
SPT21YMR179W MKK2P32491 506 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 209.8 ms