RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W YAR028WP39548 234 aa6.68□□□□□ -1.34
SPO20YMR017W YGR045CP53229 120 aa6.68□□□□□ -1.34
SPO20YMR017W YNR063WP53749 607 aa6.68□□□□□ -1.34
SPO20YMR017W GDE1Q02979 1223 aa6.68□□□□□ -1.34
SPO20YMR017W RKM2Q03942 479 aa6.68□□□□□ -1.34
SPO20YMR017W TAT1P38085 619 aa6.67□□□□□ -1.34
SPO20YMR017W ARI1P53111 347 aaKnown RBP6.67□□□□□ -1.34
SPO20YMR017W ELA1P53861 379 aaPredicted RBP6.67□□□□□ -1.34
SPO20YMR017W PUS1Q12211 544 aaKnown RBP6.67□□□□□ -1.34
SPO20YMR017W GPT2P36148 743 aa6.66□□□□□ -1.34
SPO20YMR017W EEB1Q02891 456 aa6.66□□□□□ -1.34
SPO20YMR017W MKK2P32491 506 aa6.65□□□□□ -1.34
SPO20YMR017W SKN7P38889 622 aa6.65□□□□□ -1.34
SPO20YMR017W YGR053CP53234 283 aa6.65□□□□□ -1.34
SPO20YMR017W RAT1Q02792 1006 aaKnown RBP6.65□□□□□ -1.34
SPO20YMR017W LAP2Q10740 671 aa6.65□□□□□ -1.34
SPO20YMR017W AFG2P32794 780 aa6.64□□□□□ -1.35
SPO20YMR017W RER2P35196 286 aa6.64□□□□□ -1.35
SPO20YMR017W HSE1P38753 452 aa6.64□□□□□ -1.35
SPO20YMR017W TRP2P00899 507 aaKnown RBP6.63□□□□□ -1.35
SPO20YMR017W MSH4P40965 878 aaPredicted RBP6.63□□□□□ -1.35
SPO20YMR017W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
SPO20YMR017W MCA1Q08601 432 aa6.63□□□□□ -1.35
SPO20YMR017W SYP1P25623 870 aaKnown RBP6.62□□□□□ -1.35
SPO20YMR017W LYP1P32487 611 aa6.62□□□□□ -1.35
SPO20YMR017W SMY2P32909 740 aaKnown RBP6.62□□□□□ -1.35
SPO20YMR017W ALG3P38179 458 aa6.62□□□□□ -1.35
SPO20YMR017W AKR1P39010 764 aa6.62□□□□□ -1.35
SPO20YMR017W RSA3Q05942 220 aaKnown RBP6.62□□□□□ -1.35
SPO20YMR017W NNK1P36003 928 aa6.61□□□□□ -1.35
SPO20YMR017W VPS53P47061 822 aa6.61□□□□□ -1.35
SPO20YMR017W TYW3P53177 273 aa6.61□□□□□ -1.35
SPO20YMR017W GIC2Q06648 383 aa6.61□□□□□ -1.35
SPO20YMR017W FAL1Q12099 399 aaKnown RBP6.61□□□□□ -1.35
SPO20YMR017W SSF2Q12153 453 aaPredicted RBP6.61□□□□□ -1.35
SPO20YMR017W PTC5Q12511 572 aa6.61□□□□□ -1.35
SPO20YMR017W DBP5P20449 482 aaKnown RBP6.6□□□□□ -1.35
SPO20YMR017W PRI2P20457 528 aa6.6□□□□□ -1.35
SPO20YMR017W NFS1P25374 497 aa6.6□□□□□ -1.35
SPO20YMR017W NAM7P30771 971 aaKnown RBP6.6□□□□□ -1.35
SPO20YMR017W CNN1P43618 361 aa6.6□□□□□ -1.35
SPO20YMR017W RET1P22276 1149 aaKnown RBP6.59□□□□□ -1.35
SPO20YMR017W ALT1P52893 592 aa6.59□□□□□ -1.35
SPO20YMR017W TIF35Q04067 274 aaKnown RBP6.59□□□□□ -1.35
SPO20YMR017W SPO20Q04359 397 aa6.59□□□□□ -1.35
SPO20YMR017W YLR257WQ06146 321 aaKnown RBP6.59□□□□□ -1.35
SPO20YMR017W AOS1Q06624 347 aa6.59□□□□□ -1.35
SPO20YMR017W OPI10Q08202 246 aa6.59□□□□□ -1.35
SPO20YMR017W WRS1Q12109 432 aaKnown RBP6.59□□□□□ -1.35
SPO20YMR017W RPS4AP0CX35 261 aaKnown RBP6.58□□□□□ -1.36
SPO20YMR017W RPS4BP0CX36 261 aaKnown RBP6.58□□□□□ -1.36
SPO20YMR017W BAS1P22035 811 aa6.58□□□□□ -1.36
SPO20YMR017W COQ2P32378 372 aa6.58□□□□□ -1.36
SPO20YMR017W PGM1P33401 570 aaKnown RBP6.58□□□□□ -1.36
SPO20YMR017W QNS1P38795 714 aaKnown RBP6.58□□□□□ -1.36
SPO20YMR017W YPL034WQ03083 165 aa6.58□□□□□ -1.36
SPO20YMR017W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
SPO20YMR017W MOT2P34909 587 aaKnown RBP6.57□□□□□ -1.36
SPO20YMR017W YKL069WP36088 180 aa6.57□□□□□ -1.36
SPO20YMR017W MCM7P38132 845 aa6.57□□□□□ -1.36
SPO20YMR017W SAF1P38352 637 aa6.57□□□□□ -1.36
SPO20YMR017W NNF1P47149 201 aa6.57□□□□□ -1.36
SPO20YMR017W HRK1Q08732 759 aaKnown RBP6.57□□□□□ -1.36
SPO20YMR017W INO1P11986 533 aa6.56□□□□□ -1.36
SPO20YMR017W RGD1P38339 666 aa6.56□□□□□ -1.36
SPO20YMR017W NMD3P38861 518 aaKnown RBP6.56□□□□□ -1.36
SPO20YMR017W HNT2P49775 206 aa6.56□□□□□ -1.36
SPO20YMR017W TPP1Q03796 238 aa6.56□□□□□ -1.36
SPO20YMR017W YLR225CQ05948 407 aaKnown RBP6.56□□□□□ -1.36
SPO20YMR017W ESC2Q06340 456 aa6.56□□□□□ -1.36
SPO20YMR017W MLS1P30952 554 aa6.55□□□□□ -1.36
SPO20YMR017W ABD1P32783 436 aaPredicted RBP6.55□□□□□ -1.36
SPO20YMR017W WHI3P34761 661 aaKnown RBP6.55□□□□□ -1.36
SPO20YMR017W SEA4P38164 1038 aa6.55□□□□□ -1.36
SPO20YMR017W MPH1P40562 993 aa6.55□□□□□ -1.36
SPO20YMR017W MMM1P41800 426 aa6.55□□□□□ -1.36
SPO20YMR017W KRI1P42846 591 aaKnown RBP6.55□□□□□ -1.36
SPO20YMR017W YJL045WP47052 634 aa6.55□□□□□ -1.36
SPO20YMR017W CCT8P47079 568 aaKnown RBP6.55□□□□□ -1.36
SPO20YMR017W EAR1Q03212 550 aa6.55□□□□□ -1.36
SPO20YMR017W TDA5Q06417 326 aaKnown RBP6.55□□□□□ -1.36
SPO20YMR017W PUS7Q08647 676 aaKnown RBP6.55□□□□□ -1.36
SPO20YMR017W PUF4P25339 888 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
SPO20YMR017W KIP1P28742 1111 aa6.54□□□□□ -1.36
SPO20YMR017W YPL260WQ08977 551 aa6.54□□□□□ -1.36
SPO20YMR017W SPO21Q12411 609 aa6.54□□□□□ -1.36
SPO20YMR017W RKM4Q12504 494 aa6.54□□□□□ -1.36
SPO20YMR017W AGP1P25376 633 aa6.53□□□□□ -1.36
SPO20YMR017W OCA5P38738 679 aa6.53□□□□□ -1.36
SPO20YMR017W GPB2P39717 880 aa6.53□□□□□ -1.36
SPO20YMR017W SPF1P39986 1215 aaKnown RBP6.53□□□□□ -1.36
SPO20YMR017W YPL066WQ12194 479 aa6.53□□□□□ -1.36
SPO20YMR017W YLR122CQ12312 125 aa6.53□□□□□ -1.36
SPO20YMR017W CHS2P14180 963 aa6.52□□□□□ -1.37
SPO20YMR017W SBA1P28707 216 aaKnown RBP6.52□□□□□ -1.37
SPO20YMR017W YKL107WP34251 309 aa6.52□□□□□ -1.37
SPO20YMR017W CIT3P43635 486 aa6.52□□□□□ -1.37
SPO20YMR017W GRX1P25373 110 aaKnown RBP6.51□□□□□ -1.37
SPO20YMR017W KAE1P36132 386 aa6.51□□□□□ -1.37
SPO20YMR017W YGL176CP46945 554 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 91.7 ms