RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C YHL012WP38709 493 aa5.54□□□□□ -1.52
RPN13YLR421C ULP1Q02724 621 aa5.54□□□□□ -1.52
RPN13YLR421C RSA3Q05942 220 aaKnown RBP5.54□□□□□ -1.52
RPN13YLR421C ESC8Q08119 714 aa5.54□□□□□ -1.52
RPN13YLR421C YDL177CQ12257 170 aa5.54□□□□□ -1.52
RPN13YLR421C YCR015CP25616 317 aa5.53□□□□□ -1.52
RPN13YLR421C VPS35P34110 944 aa5.53□□□□□ -1.52
RPN13YLR421C ETP1P38748 585 aaKnown RBP5.53□□□□□ -1.52
RPN13YLR421C HSE1P38753 452 aa5.53□□□□□ -1.52
RPN13YLR421C TOS4Q06266 489 aa5.53□□□□□ -1.52
RPN13YLR421C LAP2Q10740 671 aa5.53□□□□□ -1.52
RPN13YLR421C SAM35P14693 329 aa5.52□□□□□ -1.53
RPN13YLR421C KAR2P16474 682 aaKnown RBP5.52□□□□□ -1.53
RPN13YLR421C VMA4P22203 233 aaKnown RBP5.52□□□□□ -1.53
RPN13YLR421C MET4P32389 672 aa5.52□□□□□ -1.53
RPN13YLR421C THI80P35202 319 aa5.52□□□□□ -1.53
RPN13YLR421C AIM3P38266 947 aaKnown RBP5.52□□□□□ -1.53
RPN13YLR421C PEX28P38848 579 aa5.52□□□□□ -1.53
RPN13YLR421C TAF1P46677 1066 aa5.52□□□□□ -1.53
RPN13YLR421C MRPL22P53881 309 aa5.52□□□□□ -1.53
RPN13YLR421C SSF1P38789 453 aaPredicted RBP5.51□□□□□ -1.53
RPN13YLR421C DAK2P43550 591 aa5.51□□□□□ -1.53
RPN13YLR421C YJL045WP47052 634 aa5.51□□□□□ -1.53
RPN13YLR421C HRK1Q08732 759 aaKnown RBP5.51□□□□□ -1.53
RPN13YLR421C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
RPN13YLR421C PRP6P19735 899 aaPredicted RBP5.5□□□□□ -1.53
RPN13YLR421C THI12P42883 340 aa5.5□□□□□ -1.53
RPN13YLR421C THI5P43534 340 aa5.5□□□□□ -1.53
RPN13YLR421C THI11P47183 340 aa5.5□□□□□ -1.53
RPN13YLR421C THI13Q07748 340 aa5.5□□□□□ -1.53
RPN13YLR421C AIM26P32858 118 aa5.49□□□□□ -1.53
RPN13YLR421C MDL2P33311 773 aa5.49□□□□□ -1.53
RPN13YLR421C QNS1P38795 714 aaKnown RBP5.49□□□□□ -1.53
RPN13YLR421C OXR1Q08952 273 aa5.49□□□□□ -1.53
RPN13YLR421C WHI5Q12416 295 aa5.49□□□□□ -1.53
RPN13YLR421C PPX1P38698 397 aa5.48□□□□□ -1.53
RPN13YLR421C GIP4P39732 760 aa5.48□□□□□ -1.53
RPN13YLR421C FOL2P51601 243 aaKnown RBP5.48□□□□□ -1.53
RPN13YLR421C YGL140CP53120 1219 aa5.48□□□□□ -1.53
RPN13YLR421C MSC6Q08818 692 aaKnown RBP5.48□□□□□ -1.53
RPN13YLR421C HEM13P11353 328 aaKnown RBP5.47□□□□□ -1.53
RPN13YLR421C ADD66P36040 267 aa5.47□□□□□ -1.53
RPN13YLR421C RDH54P38086 958 aa5.47□□□□□ -1.53
RPN13YLR421C FAA3P39002 694 aa5.47□□□□□ -1.53
RPN13YLR421C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
RPN13YLR421C YPL109CQ02981 657 aa5.47□□□□□ -1.53
RPN13YLR421C FLR1P38124 548 aa5.46□□□□□ -1.54
RPN13YLR421C STM1P39015 273 aaKnown RBP5.46□□□□□ -1.54
RPN13YLR421C ADI1Q03677 179 aa5.46□□□□□ -1.54
RPN13YLR421C SRO9P25567 434 aaKnown RBP5.45□□□□□ -1.54
RPN13YLR421C RIM8P53179 542 aa5.45□□□□□ -1.54
RPN13YLR421C RKM2Q03942 479 aa5.45□□□□□ -1.54
RPN13YLR421C DED1P06634 604 aaKnown RBP5.44□□□□□ -1.54
RPN13YLR421C YSC84P32793 468 aa5.44□□□□□ -1.54
RPN13YLR421C RPT1P33299 467 aaKnown RBP5.44□□□□□ -1.54
RPN13YLR421C VPS53P47061 822 aa5.44□□□□□ -1.54
RPN13YLR421C SNO2P53823 222 aa5.44□□□□□ -1.54
RPN13YLR421C EST2Q06163 884 aa5.44□□□□□ -1.54
RPN13YLR421C AFG2P32794 780 aa5.43□□□□□ -1.54
RPN13YLR421C TOD6P34219 525 aa5.43□□□□□ -1.54
RPN13YLR421C GPB2P39717 880 aa5.43□□□□□ -1.54
RPN13YLR421C PIC2P40035 300 aa5.43□□□□□ -1.54
RPN13YLR421C RSC58Q07979 502 aa5.43□□□□□ -1.54
RPN13YLR421C RCL1Q08096 367 aaPredicted RBP5.43□□□□□ -1.54
RPN13YLR421C YPL277CQ08989 487 aa5.43□□□□□ -1.54
RPN13YLR421C RPS13P05756 151 aaKnown RBP5.42□□□□□ -1.54
RPN13YLR421C SEC23P15303 768 aaKnown RBP5.42□□□□□ -1.54
RPN13YLR421C KIP1P28742 1111 aa5.42□□□□□ -1.54
RPN13YLR421C SOD2P00447 233 aa5.41□□□□□ -1.54
RPN13YLR421C HXK1P04806 485 aaKnown RBP5.41□□□□□ -1.54
RPN13YLR421C SPS1P08458 490 aa5.41□□□□□ -1.54
RPN13YLR421C NBA1Q08229 501 aaKnown RBP5.41□□□□□ -1.54
RPN13YLR421C PTC5Q12511 572 aa5.41□□□□□ -1.54
RPN13YLR421C IPL1P38991 367 aa5.4□□□□□ -1.54
RPN13YLR421C COQ4O13525 335 aa5.39□□□□□ -1.55
RPN13YLR421C ALG3P38179 458 aa5.39□□□□□ -1.55
RPN13YLR421C SEC20P28791 383 aa5.37□□□□□ -1.55
RPN13YLR421C CCZ1P38273 704 aa5.37□□□□□ -1.55
RPN13YLR421C TNA1P53322 534 aa5.37□□□□□ -1.55
RPN13YLR421C HOS3Q02959 697 aaKnown RBP5.37□□□□□ -1.55
RPN13YLR421C HDA2Q06629 674 aa5.37□□□□□ -1.55
RPN13YLR421C RSB1Q08417 382 aa5.36□□□□□ -1.55
RPN13YLR421C YOR352WQ08816 343 aa5.36□□□□□ -1.55
RPN13YLR421C SPO21Q12411 609 aa5.36□□□□□ -1.55
RPN13YLR421C RAT1Q02792 1006 aaKnown RBP5.35□□□□□ -1.55
RPN13YLR421C ROD1Q02805 837 aa5.35□□□□□ -1.55
RPN13YLR421C PRE9P23638 258 aaKnown RBP5.34□□□□□ -1.55
RPN13YLR421C BAP2P38084 609 aa5.34□□□□□ -1.55
RPN13YLR421C MRPS18P42847 217 aa5.34□□□□□ -1.55
RPN13YLR421C YGR122WP53272 402 aa5.34□□□□□ -1.55
RPN13YLR421C SGD1Q06132 899 aa5.34□□□□□ -1.55
RPN13YLR421C YLR358CO13565 187 aa5.33□□□□□ -1.56
RPN13YLR421C CYC1P00044 109 aaPredicted RBP5.33□□□□□ -1.56
RPN13YLR421C SNF5P18480 905 aa5.33□□□□□ -1.56
RPN13YLR421C ABZ1P37254 787 aaPredicted RBP5.33□□□□□ -1.56
RPN13YLR421C PIK1P39104 1066 aa5.33□□□□□ -1.56
RPN13YLR421C SEC26P41810 973 aaKnown RBP5.33□□□□□ -1.56
RPN13YLR421C SPT20P50875 604 aa5.33□□□□□ -1.56
RPN13YLR421C ENV11P53246 860 aa5.33□□□□□ -1.56
RPN13YLR421C CLU1Q03690 1277 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms