RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeastyeast

Gene SEC13, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC13YLR208W VMA2P16140 517 aaKnown RBP6.54□□□□□ -1.36
SEC13YLR208W SLA1P32790 1244 aa6.54□□□□□ -1.36
SEC13YLR208W RGT1P32862 1170 aa6.54□□□□□ -1.36
SEC13YLR208W HAL5P38970 855 aaKnown RBP6.54□□□□□ -1.36
SEC13YLR208W PTC2P39966 464 aaKnown RBP6.54□□□□□ -1.36
SEC13YLR208W MSH4P40965 878 aaPredicted RBP6.54□□□□□ -1.36
SEC13YLR208W MPP10P47083 593 aaKnown RBP6.54□□□□□ -1.36
SEC13YLR208W DAP1Q12091 152 aa6.54□□□□□ -1.36
SEC13YLR208W YDR524C-BQ3E6R4 66 aa6.54□□□□□ -1.36
SEC13YLR208W MAK16P10962 306 aaPredicted RBP6.53□□□□□ -1.36
SEC13YLR208W YML037CQ03703 340 aa6.53□□□□□ -1.36
SEC13YLR208W ERG12P07277 443 aa6.52□□□□□ -1.37
SEC13YLR208W SEC18P18759 758 aaKnown RBP6.52□□□□□ -1.37
SEC13YLR208W CLB5P30283 435 aa6.52□□□□□ -1.37
SEC13YLR208W IRE1P32361 1115 aa6.52□□□□□ -1.37
SEC13YLR208W NOC2P39744 710 aaKnown RBP6.52□□□□□ -1.37
SEC13YLR208W YPR109WQ06104 294 aa6.52□□□□□ -1.37
SEC13YLR208W LAP2Q10740 671 aa6.52□□□□□ -1.37
SEC13YLR208W YRR1Q12172 810 aa6.52□□□□□ -1.37
SEC13YLR208W YOL098CQ12496 1037 aa6.52□□□□□ -1.37
SEC13YLR208W TPD3P31383 635 aa6.51□□□□□ -1.37
SEC13YLR208W CST26P38226 397 aa6.51□□□□□ -1.37
SEC13YLR208W GPB2P39717 880 aa6.51□□□□□ -1.37
SEC13YLR208W SKP2P42843 763 aa6.51□□□□□ -1.37
SEC13YLR208W BUL2Q03758 920 aaKnown RBP6.51□□□□□ -1.37
SEC13YLR208W FAB1P34756 2278 aa6.5□□□□□ -1.37
SEC13YLR208W PPG1P32838 368 aa6.5□□□□□ -1.37
SEC13YLR208W BOI2P39969 1040 aa6.5□□□□□ -1.37
SEC13YLR208W JHD1P40034 492 aa6.5□□□□□ -1.37
SEC13YLR208W RSC8P43609 557 aaKnown RBP6.5□□□□□ -1.37
SEC13YLR208W RPS0BP46654 252 aaKnown RBP6.5□□□□□ -1.37
SEC13YLR208W FOL2P51601 243 aaKnown RBP6.5□□□□□ -1.37
SEC13YLR208W SCS3P53012 380 aa6.5□□□□□ -1.37
SEC13YLR208W YNL193WP53870 558 aa6.5□□□□□ -1.37
SEC13YLR208W YML082WQ04533 649 aaKnown RBP6.5□□□□□ -1.37
SEC13YLR208W TEL1P38110 2787 aa6.5□□□□□ -1.37
SEC13YLR208W HEM1P09950 548 aaPredicted RBP6.49□□□□□ -1.37
SEC13YLR208W CAD1P24813 409 aaKnown RBP6.49□□□□□ -1.37
SEC13YLR208W TSR4P25040 408 aa6.49□□□□□ -1.37
SEC13YLR208W TOA1P32773 286 aa6.49□□□□□ -1.37
SEC13YLR208W YBL036CP38197 257 aa6.49□□□□□ -1.37
SEC13YLR208W PIP2P52960 996 aa6.49□□□□□ -1.37
SEC13YLR208W VID30P53076 958 aa6.49□□□□□ -1.37
SEC13YLR208W KEL3Q08979 651 aaPredicted RBP6.49□□□□□ -1.37
SEC13YLR208W SRP40P32583 406 aaPredicted RBP6.48□□□□□ -1.37
SEC13YLR208W UTR4P32626 227 aa6.48□□□□□ -1.37
SEC13YLR208W SIS2P36024 562 aa6.48□□□□□ -1.37
SEC13YLR208W BOI1P38041 980 aaKnown RBP6.48□□□□□ -1.37
SEC13YLR208W TPM2P40414 161 aa6.48□□□□□ -1.37
SEC13YLR208W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
SEC13YLR208W RPN7Q06103 429 aaKnown RBP6.48□□□□□ -1.37
SEC13YLR208W RRI2Q12348 645 aa6.48□□□□□ -1.37
SEC13YLR208W PDC1P06169 563 aaKnown RBP6.47□□□□□ -1.37
SEC13YLR208W SSB1P11484 613 aaKnown RBP6.47□□□□□ -1.37
SEC13YLR208W YUR1P26725 428 aa6.47□□□□□ -1.37
SEC13YLR208W POT1P27796 417 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
SEC13YLR208W GRX7P38068 203 aa6.47□□□□□ -1.37
SEC13YLR208W SSB2P40150 613 aaKnown RBP6.47□□□□□ -1.37
SEC13YLR208W TY4A-JP47023 414 aa6.47□□□□□ -1.37
SEC13YLR208W RMD1Q03441 430 aa6.47□□□□□ -1.37
SEC13YLR208W MSC6Q08818 692 aaKnown RBP6.47□□□□□ -1.37
SEC13YLR208W YDR461C-AQ2V2P7 80 aa6.47□□□□□ -1.37
SEC13YLR208W PUP1P25043 261 aa6.46□□□□□ -1.38
SEC13YLR208W BCK2P33306 851 aa6.46□□□□□ -1.38
SEC13YLR208W MCM6P53091 1017 aaKnown RBP6.46□□□□□ -1.38
SEC13YLR208W RRP15Q06511 250 aaPredicted RBP6.46□□□□□ -1.38
SEC13YLR208W VRP1P37370 817 aa6.45□□□□□ -1.38
SEC13YLR208W RDH54P38086 958 aa6.45□□□□□ -1.38
SEC13YLR208W YGL039WP53183 348 aaKnown RBP6.45□□□□□ -1.38
SEC13YLR208W YGR125WP53273 1036 aa6.45□□□□□ -1.38
SEC13YLR208W YNL115CP53925 644 aa6.45□□□□□ -1.38
SEC13YLR208W ALD6P54115 500 aaKnown RBP6.45□□□□□ -1.38
SEC13YLR208W DAK1P54838 584 aaKnown RBP6.45□□□□□ -1.38
SEC13YLR208W YML083CQ04526 418 aa6.45□□□□□ -1.38
SEC13YLR208W CDC19P00549 500 aaKnown RBP6.44□□□□□ -1.38
SEC13YLR208W PIF1P07271 859 aa6.44□□□□□ -1.38
SEC13YLR208W POX1P13711 748 aa6.44□□□□□ -1.38
SEC13YLR208W RAM1P22007 431 aa6.44□□□□□ -1.38
SEC13YLR208W PRE8P23639 250 aa6.44□□□□□ -1.38
SEC13YLR208W NUD1P32336 851 aa6.44□□□□□ -1.38
SEC13YLR208W TOM71P38825 639 aaKnown RBP6.44□□□□□ -1.38
SEC13YLR208W PMC1P38929 1173 aaPredicted RBP6.44□□□□□ -1.38
SEC13YLR208W FUN12P39730 1002 aaKnown RBP6.44□□□□□ -1.38
SEC13YLR208W POL32P47110 350 aa6.44□□□□□ -1.38
SEC13YLR208W PTK2P47116 818 aaKnown RBP6.44□□□□□ -1.38
SEC13YLR208W BRE1Q07457 700 aaKnown RBP6.44□□□□□ -1.38
SEC13YLR208W CYB2P00175 591 aa6.43□□□□□ -1.38
SEC13YLR208W RPP0P05317 312 aaKnown RBP6.43□□□□□ -1.38
SEC13YLR208W RPT2P40327 437 aaKnown RBP6.43□□□□□ -1.38
SEC13YLR208W POB3Q04636 552 aaKnown RBP6.43□□□□□ -1.38
SEC13YLR208W HIF1Q12373 385 aa6.43□□□□□ -1.38
SEC13YLR208W RTP1Q12751 981 aa6.43□□□□□ -1.38
SEC13YLR208W YBL113CQ7M4S9 792 aa6.43□□□□□ -1.38
SEC13YLR208W PHR1P05066 565 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
SEC13YLR208W SAM1P10659 382 aaKnown RBP6.42□□□□□ -1.38
SEC13YLR208W SRM1P21827 482 aa6.42□□□□□ -1.38
SEC13YLR208W BIO2P32451 375 aa6.42□□□□□ -1.38
SEC13YLR208W SHP1P34223 423 aa6.42□□□□□ -1.38
SEC13YLR208W YPP1P46951 817 aa6.42□□□□□ -1.38
SEC13YLR208W ALG12P53730 551 aa6.42□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms