RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PWP1	YLR196W	PET123	P17558	318 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	SEC8	P32855	1065 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	ABZ1	P37254	787 aa	Predicted RBP	5.74	□□□□□ -1.49
PWP1	YLR196W	APD1	P38281	316 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	STN1	P38960	494 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	MAD1	P40957	749 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	ALG2	P43636	503 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	NOP15	P53927	220 aa	Predicted RBP	5.74	□□□□□ -1.49
PWP1	YLR196W	NNT1	Q05874	261 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	YIG1	Q08956	461 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	ENT1	Q12518	454 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	YIL002W-A	Q3E7Z5	69 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	YME2	P32843	850 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	VPS35	P34110	944 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	UIP5	P36137	443 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	HSM3	P38348	480 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	OSH3	P38713	996 aa	Known RBP	5.74	□□□□□ -1.49
PWP1	YLR196W	ORM1	P53224	222 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	KRE28	Q04431	385 aa		5.74	□□□□□ -1.49
PWP1	YLR196W	RKM1	Q08961	583 aa	Predicted RBP	5.74	□□□□□ -1.49
PWP1	YLR196W	RTC5	Q12108	567 aa	Known RBP	5.74	□□□□□ -1.49
PWP1	YLR196W	YIL177C	P40434	1758 aa		5.73	□□□□□ -1.49
PWP1	YLR196W	YJL225C	P40889	1758 aa		5.73	□□□□□ -1.49
PWP1	YLR196W	APC1	P53886	1748 aa		5.73	□□□□□ -1.49
PWP1	YLR196W	PSK1	P31374	1356 aa		5.73	□□□□□ -1.49
PWP1	YLR196W	PMS1	P14242	873 aa		5.73	□□□□□ -1.49
PWP1	YLR196W	NUP120	P35729	1037 aa		5.73	□□□□□ -1.49
PWP1	YLR196W	DAS1	P47005	663 aa		5.73	□□□□□ -1.49
PWP1	YLR196W	RCM1	P53972	490 aa		5.73	□□□□□ -1.49
PWP1	YLR196W	RNH1	Q04740	348 aa		5.73	□□□□□ -1.49
PWP1	YLR196W	NSE3	Q05541	303 aa		5.73	□□□□□ -1.49
PWP1	YLR196W	ESC2	Q06340	456 aa		5.73	□□□□□ -1.49
PWP1	YLR196W	RRP5	Q05022	1729 aa	Known RBP	5.73	□□□□□ -1.49
PWP1	YLR196W	YRF1-4	O13559	1382 aa		5.72	□□□□□ -1.49
PWP1	YLR196W	TRP5	P00931	707 aa	Known RBP	5.72	□□□□□ -1.49
PWP1	YLR196W	MSH1	P25846	959 aa		5.72	□□□□□ -1.49
PWP1	YLR196W	PLC1	P32383	869 aa		5.72	□□□□□ -1.49
PWP1	YLR196W	ANP1	P32629	500 aa		5.72	□□□□□ -1.49
PWP1	YLR196W	RRN6	P32786	894 aa		5.72	□□□□□ -1.49
PWP1	YLR196W	PET112	P33893	541 aa		5.72	□□□□□ -1.49
PWP1	YLR196W	APL2	P36000	726 aa	Predicted RBP	5.72	□□□□□ -1.49
PWP1	YLR196W	MRPL40	P36534	297 aa		5.72	□□□□□ -1.49
PWP1	YLR196W	RRP8	P38961	392 aa	Known RBP	5.72	□□□□□ -1.49
PWP1	YLR196W	TEA1	P47988	759 aa		5.72	□□□□□ -1.49
PWP1	YLR196W	YBL111C	Q3E7Y5	667 aa		5.72	□□□□□ -1.49
PWP1	YLR196W	MRPS28	P21771	286 aa		5.71	□□□□□ -1.49
PWP1	YLR196W	KAR9	P32526	644 aa		5.71	□□□□□ -1.49
PWP1	YLR196W	RXT2	P38255	430 aa		5.71	□□□□□ -1.49
PWP1	YLR196W	VPS29	P38759	282 aa		5.71	□□□□□ -1.49
PWP1	YLR196W	RTT105	P40063	208 aa		5.71	□□□□□ -1.49
PWP1	YLR196W	RIC1	P40395	1056 aa		5.71	□□□□□ -1.49
PWP1	YLR196W	UTP22	P53254	1237 aa	Predicted RBP	5.71	□□□□□ -1.49
PWP1	YLR196W	DCP2	P53550	970 aa	Known RBP	5.71	□□□□□ -1.49
PWP1	YLR196W	ATG38	Q05789	226 aa	Known RBP	5.71	□□□□□ -1.49
PWP1	YLR196W	DBP9	Q06218	594 aa	Known RBP	5.71	□□□□□ -1.49
PWP1	YLR196W	GNT1	Q12096	491 aa		5.71	□□□□□ -1.49
PWP1	YLR196W	MAK21	Q12176	1025 aa	Known RBP	5.71	□□□□□ -1.49
PWP1	YLR196W	TEF1	P02994	458 aa	Known RBP	5.71	□□□□□ -1.5
PWP1	YLR196W	PRT1	P06103	763 aa	Known RBP	5.71	□□□□□ -1.5
PWP1	YLR196W	MET4	P32389	672 aa		5.71	□□□□□ -1.5
PWP1	YLR196W	MNR2	P35724	969 aa		5.71	□□□□□ -1.5
PWP1	YLR196W	EFM5	P53200	248 aa	Known RBP	5.71	□□□□□ -1.5
PWP1	YLR196W	LCD1	Q04377	747 aa		5.71	□□□□□ -1.5
PWP1	YLR196W	TY4B-H	P0C2J7	1802 aa		5.7	□□□□□ -1.5
PWP1	YLR196W	TY4B-J	P47024	1803 aa		5.7	□□□□□ -1.5
PWP1	YLR196W	STE6	P12866	1290 aa		5.7	□□□□□ -1.5
PWP1	YLR196W	SLA1	P32790	1244 aa		5.7	□□□□□ -1.5
PWP1	YLR196W	PTH2	P34222	208 aa		5.7	□□□□□ -1.5
PWP1	YLR196W	HCS1	P34243	683 aa		5.7	□□□□□ -1.5
PWP1	YLR196W	SLX1	P38324	304 aa		5.7	□□□□□ -1.5
PWP1	YLR196W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
PWP1	YLR196W	MET12	P46151	657 aa		5.7	□□□□□ -1.5
PWP1	YLR196W	IML2	P47031	731 aa		5.7	□□□□□ -1.5
PWP1	YLR196W	CWH41	P53008	833 aa		5.7	□□□□□ -1.5
PWP1	YLR196W	SVL3	Q03088	825 aa	Known RBP	5.7	□□□□□ -1.5
PWP1	YLR196W	RPN4	Q03465	531 aa		5.7	□□□□□ -1.5
PWP1	YLR196W	SXM1	Q04175	944 aa	Known RBP	5.7	□□□□□ -1.5
PWP1	YLR196W	MDM36	Q06820	579 aa		5.7	□□□□□ -1.5
PWP1	YLR196W	RRP36	Q12481	300 aa	Predicted RBP	5.7	□□□□□ -1.5
PWP1	YLR196W	DPS1	P04802	557 aa	Known RBP	5.69	□□□□□ -1.5
PWP1	YLR196W	HOM3	P10869	527 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	SRS2	P12954	1174 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	CPS1	P27614	576 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	PTR2	P32901	601 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	LHS1	P36016	881 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	UGA2	P38067	497 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	PEX18	P38855	283 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	SNX4	P47057	423 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	SRB7	P47822	140 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	ECL1	P48235	211 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	OYE2	Q03558	400 aa	Known RBP	5.69	□□□□□ -1.5
PWP1	YLR196W	CST9	Q06032	482 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	GIC2	Q06648	383 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	VAM6	Q07468	1049 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	BUD7	Q08754	746 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	YPL277C	Q08989	487 aa		5.69	□□□□□ -1.5
PWP1	YLR196W	TUF1	P02992	437 aa	Known RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	KEX1	P09620	729 aa		5.68	□□□□□ -1.5
PWP1	YLR196W	SSB1	P11484	613 aa	Known RBP	5.68	□□□□□ -1.5
PWP1	YLR196W	FMP10	P40098	244 aa		5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 70.3 ms