RNA–Protein interactions for RNA: YLL035W

GRC3, Transcript of Polynucleotide kinase present on rDNA, yeast

Gene GRC3, Length 1,899 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GRC3	YLL035W	TMA64	Q04600	565 aa	Known RBP	4.83	□□□□□ -1.64
GRC3	YLL035W	HEL2	Q05580	639 aa	Known RBP	4.83	□□□□□ -1.64
GRC3	YLL035W	VAM6	Q07468	1049 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	YDL129W	Q07555	291 aa		4.83	□□□□□ -1.64
GRC3	YLL035W	RNR2	P09938	399 aa	Known RBP	4.82	□□□□□ -1.64
GRC3	YLL035W	TAL1	P15019	335 aa	Known RBP	4.82	□□□□□ -1.64
GRC3	YLL035W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
GRC3	YLL035W	UBP1	P25037	809 aa		4.82	□□□□□ -1.64
GRC3	YLL035W	KCC4	P25389	1037 aa		4.82	□□□□□ -1.64
GRC3	YLL035W	SRP40	P32583	406 aa	Predicted RBP	4.82	□□□□□ -1.64
GRC3	YLL035W	GRX4	P32642	244 aa		4.82	□□□□□ -1.64
GRC3	YLL035W	RAD5	P32849	1169 aa	Predicted RBP	4.82	□□□□□ -1.64
GRC3	YLL035W	TBS1	P38114	1094 aa		4.82	□□□□□ -1.64
GRC3	YLL035W	PIH1	P38768	344 aa		4.82	□□□□□ -1.64
GRC3	YLL035W	SSZ1	P38788	538 aa	Known RBP	4.82	□□□□□ -1.64
GRC3	YLL035W	CCT4	P39078	528 aa	Known RBP	4.82	□□□□□ -1.64
GRC3	YLL035W	MAD1	P40957	749 aa		4.82	□□□□□ -1.64
GRC3	YLL035W	SHE10	P53075	577 aa		4.82	□□□□□ -1.64
GRC3	YLL035W	YDR344C	Q05510	147 aa		4.82	□□□□□ -1.64
GRC3	YLL035W	SFH1	Q06168	426 aa		4.82	□□□□□ -1.64
GRC3	YLL035W	SDH5	Q08230	162 aa		4.82	□□□□□ -1.64
GRC3	YLL035W	YBL113C	Q7M4S9	792 aa		4.82	□□□□□ -1.64
GRC3	YLL035W	YBT1	P32386	1661 aa		4.82	□□□□□ -1.64
GRC3	YLL035W	PET122	P10355	254 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	RPO26	P20435	155 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	SCT1	P32784	759 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
GRC3	YLL035W	UBP13	P38187	747 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	MET18	P40469	1032 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	YIL001W	P40560	513 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	IOC3	P43596	787 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	LSG1	P53145	640 aa	Known RBP	4.81	□□□□□ -1.64
GRC3	YLL035W	LSC1	P53598	329 aa	Known RBP	4.81	□□□□□ -1.64
GRC3	YLL035W	BNI5	P53890	448 aa	Known RBP	4.81	□□□□□ -1.64
GRC3	YLL035W	RSM28	Q03430	361 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	PLP1	Q04004	230 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	JIP5	Q06214	492 aa	Predicted RBP	4.81	□□□□□ -1.64
GRC3	YLL035W	RGA2	Q06407	1009 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	BUD7	Q08754	746 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	YOR223W	Q12015	292 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	CDC31	P06704	161 aa	Known RBP	4.81	□□□□□ -1.64
GRC3	YLL035W	PET494	P07390	489 aa	Predicted RBP	4.81	□□□□□ -1.64
GRC3	YLL035W	TYR1	P20049	452 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	DPB3	P27344	201 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	SEC8	P32855	1065 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	COY1	P34237	679 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	ARB1	P40024	610 aa	Known RBP	4.81	□□□□□ -1.64
GRC3	YLL035W	SDS3	P40505	327 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	MAL13	P53338	473 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	OYE2	Q03558	400 aa	Known RBP	4.81	□□□□□ -1.64
GRC3	YLL035W	NKP2	Q06162	153 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	MPC54	Q08550	464 aa		4.81	□□□□□ -1.64
GRC3	YLL035W	HMG1	P12683	1054 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	SEC15	P22224	910 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	MSM1	P22438	575 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	KTR1	P27810	393 aa	Known RBP	4.8	□□□□□ -1.64
GRC3	YLL035W	ECM32	P32644	1121 aa	Known RBP	4.8	□□□□□ -1.64
GRC3	YLL035W	YBL036C	P38197	257 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	ERP5	P38819	212 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	HXT13	P39924	564 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	VID27	P40157	782 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	STB1	P42845	420 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	COP1	P53622	1201 aa	Known RBP	4.8	□□□□□ -1.64
GRC3	YLL035W	RCM1	P53972	490 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	GDE1	Q02979	1223 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	PML39	Q03760	334 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	FUS2	Q05670	677 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	TFB4	Q12004	338 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	MCM16	Q12262	181 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	TRS33	Q99394	268 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	CDC25	P04821	1589 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	BNR1	P40450	1375 aa		4.8	□□□□□ -1.64
GRC3	YLL035W	ADE3	P07245	946 aa	Known RBP	4.79	□□□□□ -1.64
GRC3	YLL035W	ADH4	P10127	382 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	KAR1	P11927	433 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	IME1	P21190	360 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	UBC1	P21734	215 aa	Known RBP	4.79	□□□□□ -1.64
GRC3	YLL035W	YKL091C	P33324	310 aa	Known RBP	4.79	□□□□□ -1.64
GRC3	YLL035W	NUP120	P35729	1037 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	AMN1	P38285	549 aa	Predicted RBP	4.79	□□□□□ -1.64
GRC3	YLL035W	REI1	P38344	393 aa	Predicted RBP	4.79	□□□□□ -1.64
GRC3	YLL035W	SAK1	P38990	1142 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	VAC8	P39968	578 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	HUL4	P40985	892 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	YJR079W	P47126	109 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	RBL2	P48606	106 aa	Known RBP	4.79	□□□□□ -1.64
GRC3	YLL035W	YGL242C	P53066	181 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	MEH1	Q02205	184 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	TAF8	Q03750	510 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	POB3	Q04636	552 aa	Known RBP	4.79	□□□□□ -1.64
GRC3	YLL035W	PSK2	Q08217	1101 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	HMI1	Q12039	706 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	KRE5	P22023	1365 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	VAS1	P07806	1104 aa	Known RBP	4.79	□□□□□ -1.64
GRC3	YLL035W	MPH3	P0CE00	602 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	FRS2	P15625	503 aa	Known RBP	4.79	□□□□□ -1.64
GRC3	YLL035W	ARG1	P22768	420 aa		4.79	□□□□□ -1.64
GRC3	YLL035W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
GRC3	YLL035W	RPC19	P28000	142 aa	Known RBP	4.79	□□□□□ -1.64
GRC3	YLL035W	RAD54	P32863	898 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 859.2 ms