RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W SRM1P21827 482 aa6.06□□□□□ -1.44
SIR1YKR101W LSB6P42951 607 aa6.06□□□□□ -1.44
SIR1YKR101W ZDS1P50111 915 aaKnown RBP6.06□□□□□ -1.44
SIR1YKR101W UTP8P53276 713 aaKnown RBP6.06□□□□□ -1.44
SIR1YKR101W NAM8Q00539 523 aaKnown RBP6.06□□□□□ -1.44
SIR1YKR101W RAT1Q02792 1006 aaKnown RBP6.06□□□□□ -1.44
SIR1YKR101W NTG2Q08214 380 aa6.06□□□□□ -1.44
SIR1YKR101W HTS1P07263 546 aaKnown RBP6.05□□□□□ -1.44
SIR1YKR101W VMA4P22203 233 aaKnown RBP6.05□□□□□ -1.44
SIR1YKR101W PBY1P38254 753 aa6.05□□□□□ -1.44
SIR1YKR101W CRP1P38845 465 aaKnown RBP6.05□□□□□ -1.44
SIR1YKR101W MSH2P25847 964 aa6.04□□□□□ -1.44
SIR1YKR101W MBP1P39678 833 aa6.04□□□□□ -1.44
SIR1YKR101W NUG1P40010 520 aaKnown RBP6.04□□□□□ -1.44
SIR1YKR101W ENT3P47160 408 aa6.04□□□□□ -1.44
SIR1YKR101W MAL11P53048 616 aa6.04□□□□□ -1.44
SIR1YKR101W RSC2Q06488 889 aa6.04□□□□□ -1.44
SIR1YKR101W RPL8AP17076 256 aaKnown RBP6.04□□□□□ -1.44
SIR1YKR101W NEM1P38757 446 aa6.04□□□□□ -1.44
SIR1YKR101W SHU2P38957 223 aa6.04□□□□□ -1.44
SIR1YKR101W YNR029CP53729 429 aaKnown RBP6.04□□□□□ -1.44
SIR1YKR101W EST2Q06163 884 aa6.04□□□□□ -1.44
SIR1YKR101W ADR1P07248 1323 aa6.03□□□□□ -1.44
SIR1YKR101W ALR2P43553 858 aa6.03□□□□□ -1.44
SIR1YKR101W UTP5Q04177 643 aaKnown RBP6.03□□□□□ -1.44
SIR1YKR101W AOS1Q06624 347 aa6.03□□□□□ -1.44
SIR1YKR101W SYP1P25623 870 aaKnown RBP6.02□□□□□ -1.45
SIR1YKR101W SLS1P42900 643 aa6.02□□□□□ -1.45
SIR1YKR101W YGL176CP46945 554 aa6.02□□□□□ -1.45
SIR1YKR101W HUL4P40985 892 aa6.02□□□□□ -1.45
SIR1YKR101W SOG2Q08817 791 aa6.02□□□□□ -1.45
SIR1YKR101W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
SIR1YKR101W AFG2P32794 780 aa6.01□□□□□ -1.45
SIR1YKR101W YKL077WP36081 392 aa6.01□□□□□ -1.45
SIR1YKR101W OSH7P38755 437 aa6.01□□□□□ -1.45
SIR1YKR101W HEH2Q03281 663 aa6.01□□□□□ -1.45
SIR1YKR101W PRK1P40494 810 aa6□□□□□ -1.45
SIR1YKR101W FET4P40988 552 aa6□□□□□ -1.45
SIR1YKR101W UBP2Q01476 1272 aa6□□□□□ -1.45
SIR1YKR101W HAS1Q03532 505 aaKnown RBP6□□□□□ -1.45
SIR1YKR101W YOL057WQ08225 711 aa6□□□□□ -1.45
SIR1YKR101W RKM4Q12504 494 aa6□□□□□ -1.45
SIR1YKR101W DBP5P20449 482 aaKnown RBP6□□□□□ -1.45
SIR1YKR101W HBS1P32769 611 aaKnown RBP6□□□□□ -1.45
SIR1YKR101W ADD66P36040 267 aa6□□□□□ -1.45
SIR1YKR101W HSV2P50079 448 aaPredicted RBP6□□□□□ -1.45
SIR1YKR101W NPL3Q01560 414 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
SIR1YKR101W OPT2Q06593 877 aa6□□□□□ -1.45
SIR1YKR101W TOP3P13099 656 aa5.99□□□□□ -1.45
SIR1YKR101W YKL107WP34251 309 aa5.99□□□□□ -1.45
SIR1YKR101W KRI1P42846 591 aaKnown RBP5.99□□□□□ -1.45
SIR1YKR101W CNN1P43618 361 aa5.99□□□□□ -1.45
SIR1YKR101W MTR4P47047 1073 aaKnown RBP5.99□□□□□ -1.45
SIR1YKR101W YIG1Q08956 461 aa5.99□□□□□ -1.45
SIR1YKR101W PIN4P34217 668 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
SIR1YKR101W SIP5P40210 489 aaKnown RBP5.98□□□□□ -1.45
SIR1YKR101W MPH1P40562 993 aa5.98□□□□□ -1.45
SIR1YKR101W UTP22P53254 1237 aaPredicted RBP5.98□□□□□ -1.45
SIR1YKR101W ATG13Q06628 738 aa5.98□□□□□ -1.45
SIR1YKR101W HBN1Q96VH4 193 aa5.98□□□□□ -1.45
SIR1YKR101W RPP1AP05318 106 aaPredicted RBP5.98□□□□□ -1.45
SIR1YKR101W PRP9P19736 530 aaKnown RBP5.98□□□□□ -1.45
SIR1YKR101W MCM7P38132 845 aa5.98□□□□□ -1.45
SIR1YKR101W PAN5P38787 379 aa5.98□□□□□ -1.45
SIR1YKR101W GDH3P39708 457 aa5.98□□□□□ -1.45
SIR1YKR101W TFB2Q02939 513 aa5.98□□□□□ -1.45
SIR1YKR101W MEF1P25039 761 aa5.97□□□□□ -1.45
SIR1YKR101W ENP1P38333 483 aaKnown RBP5.97□□□□□ -1.45
SIR1YKR101W DIT1P21623 536 aa5.97□□□□□ -1.45
SIR1YKR101W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
SIR1YKR101W FOL1P53848 824 aa5.97□□□□□ -1.45
SIR1YKR101W UGO1Q03327 502 aa5.97□□□□□ -1.45
SIR1YKR101W TY1A-DR2Q03964 440 aaKnown RBP5.97□□□□□ -1.45
SIR1YKR101W YDL124WQ07551 312 aaKnown RBP5.97□□□□□ -1.45
SIR1YKR101W TY1A-BLQ12266 440 aa5.97□□□□□ -1.45
SIR1YKR101W CCC2P38995 1004 aa5.96□□□□□ -1.46
SIR1YKR101W NEO1P40527 1151 aa5.96□□□□□ -1.46
SIR1YKR101W ALG3P38179 458 aa5.95□□□□□ -1.46
SIR1YKR101W YNR063WP53749 607 aa5.95□□□□□ -1.46
SIR1YKR101W CUZ1P53899 274 aa5.95□□□□□ -1.46
SIR1YKR101W MLS1P30952 554 aa5.95□□□□□ -1.46
SIR1YKR101W PEX6P33760 1030 aa5.95□□□□□ -1.46
SIR1YKR101W YBR284WP38150 797 aa5.95□□□□□ -1.46
SIR1YKR101W SPO74P45819 413 aa5.95□□□□□ -1.46
SIR1YKR101W SFP1P32432 683 aa5.94□□□□□ -1.46
SIR1YKR101W PAF1P38351 445 aa5.94□□□□□ -1.46
SIR1YKR101W GUP1P53154 560 aa5.94□□□□□ -1.46
SIR1YKR101W RKM2Q03942 479 aa5.94□□□□□ -1.46
SIR1YKR101W DPS1P04802 557 aaKnown RBP5.93□□□□□ -1.46
SIR1YKR101W FPS1P23900 669 aa5.93□□□□□ -1.46
SIR1YKR101W SWE1P32944 819 aa5.93□□□□□ -1.46
SIR1YKR101W GLY1P37303 387 aaKnown RBP5.93□□□□□ -1.46
SIR1YKR101W TPM2P40414 161 aa5.93□□□□□ -1.46
SIR1YKR101W GIC2Q06648 383 aa5.93□□□□□ -1.46
SIR1YKR101W SOK2P53438 785 aaPredicted RBP5.93□□□□□ -1.46
SIR1YKR101W YMR265CQ03508 461 aaKnown RBP5.93□□□□□ -1.46
SIR1YKR101W MDM12Q92328 271 aa5.93□□□□□ -1.46
SIR1YKR101W YJR120WP47157 116 aa5.92□□□□□ -1.46
SIR1YKR101W GPG1P53130 126 aa5.92□□□□□ -1.46
SIR1YKR101W YNL193WP53870 558 aa5.92□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms