RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKT6	YKL196C	YVC1	Q12324	675 aa		4.74	□□□□□ -1.65
YKT6	YKL196C	RDH54	P38086	958 aa		4.73	□□□□□ -1.65
YKT6	YKL196C	POL32	P47110	350 aa		4.73	□□□□□ -1.65
YKT6	YKL196C	LRG1	P35688	1017 aa		4.72	□□□□□ -1.65
YKT6	YKL196C	NNK1	P36003	928 aa		4.72	□□□□□ -1.65
YKT6	YKL196C	RPS26A	P39938	119 aa	Known RBP	4.72	□□□□□ -1.65
YKT6	YKL196C	RPS26B	P39939	119 aa	Known RBP	4.72	□□□□□ -1.65
YKT6	YKL196C	YLR257W	Q06146	321 aa	Known RBP	4.72	□□□□□ -1.65
YKT6	YKL196C	RRP15	Q06511	250 aa	Predicted RBP	4.72	□□□□□ -1.65
YKT6	YKL196C	PUS7	Q08647	676 aa	Known RBP	4.72	□□□□□ -1.65
YKT6	YKL196C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
YKT6	YKL196C	VMA4	P22203	233 aa	Known RBP	4.71	□□□□□ -1.66
YKT6	YKL196C	RET1	P22276	1149 aa	Known RBP	4.71	□□□□□ -1.66
YKT6	YKL196C	NAP1	P25293	417 aa	Known RBP	4.71	□□□□□ -1.66
YKT6	YKL196C	PEX7	P39108	375 aa		4.71	□□□□□ -1.66
YKT6	YKL196C	FYV10	P40492	516 aa		4.71	□□□□□ -1.66
YKT6	YKL196C	AVT1	P47082	602 aa		4.71	□□□□□ -1.66
YKT6	YKL196C	YGR122W	P53272	402 aa		4.71	□□□□□ -1.66
YKT6	YKL196C	TPP1	Q03796	238 aa		4.71	□□□□□ -1.66
YKT6	YKL196C	SPR28	Q04921	423 aa		4.71	□□□□□ -1.66
YKT6	YKL196C	DED1	P06634	604 aa	Known RBP	4.7	□□□□□ -1.66
YKT6	YKL196C	SEC23	P15303	768 aa	Known RBP	4.7	□□□□□ -1.66
YKT6	YKL196C	SSY1	Q03770	852 aa		4.7	□□□□□ -1.66
YKT6	YKL196C	RSA3	Q05942	220 aa	Known RBP	4.7	□□□□□ -1.66
YKT6	YKL196C	YOR059C	Q08448	450 aa	Known RBP	4.7	□□□□□ -1.66
YKT6	YKL196C	TRE1	Q08919	783 aa		4.7	□□□□□ -1.66
YKT6	YKL196C	RAD2	P07276	1031 aa		4.69	□□□□□ -1.66
YKT6	YKL196C	CYC8	P14922	966 aa		4.69	□□□□□ -1.66
YKT6	YKL196C	PRE9	P23638	258 aa	Known RBP	4.69	□□□□□ -1.66
YKT6	YKL196C	AFG2	P32794	780 aa		4.69	□□□□□ -1.66
YKT6	YKL196C	CAB3	P36076	571 aa		4.69	□□□□□ -1.66
YKT6	YKL196C	POL12	P38121	705 aa	Predicted RBP	4.69	□□□□□ -1.66
YKT6	YKL196C	NSI1	Q12457	570 aa		4.69	□□□□□ -1.66
YKT6	YKL196C	PRO1	P32264	428 aa		4.68	□□□□□ -1.66
YKT6	YKL196C	HSP78	P33416	811 aa		4.68	□□□□□ -1.66
YKT6	YKL196C	ADD66	P36040	267 aa		4.68	□□□□□ -1.66
YKT6	YKL196C	MRPS18	P42847	217 aa		4.68	□□□□□ -1.66
YKT6	YKL196C	YJR107W	P47145	328 aa		4.68	□□□□□ -1.66
YKT6	YKL196C	EST2	Q06163	884 aa		4.68	□□□□□ -1.66
YKT6	YKL196C	SEG2	P34250	1132 aa		4.67	□□□□□ -1.66
YKT6	YKL196C	ATG14	P38270	344 aa		4.67	□□□□□ -1.66
YKT6	YKL196C	MGE1	P38523	228 aa		4.67	□□□□□ -1.66
YKT6	YKL196C	QNS1	P38795	714 aa	Known RBP	4.67	□□□□□ -1.66
YKT6	YKL196C	PTC7	P38797	343 aa		4.67	□□□□□ -1.66
YKT6	YKL196C	GTS1	P40956	396 aa		4.67	□□□□□ -1.66
YKT6	YKL196C	YJL045W	P47052	634 aa		4.67	□□□□□ -1.66
YKT6	YKL196C	HDA2	Q06629	674 aa		4.67	□□□□□ -1.66
YKT6	YKL196C	LAP2	Q10740	671 aa		4.67	□□□□□ -1.66
YKT6	YKL196C	LPX1	Q12405	387 aa	Known RBP	4.67	□□□□□ -1.66
YKT6	YKL196C	ADP1	P25371	1049 aa		4.66	□□□□□ -1.66
YKT6	YKL196C	HEM3	P28789	327 aa		4.66	□□□□□ -1.66
YKT6	YKL196C	SEC8	P32855	1065 aa		4.66	□□□□□ -1.66
YKT6	YKL196C	ROD1	Q02805	837 aa		4.66	□□□□□ -1.66
YKT6	YKL196C	MCD1	Q12158	566 aa		4.66	□□□□□ -1.66
YKT6	YKL196C	DFG16	Q99234	619 aa		4.66	□□□□□ -1.66
YKT6	YKL196C	SAM35	P14693	329 aa		4.65	□□□□□ -1.67
YKT6	YKL196C	RNQ1	P25367	405 aa		4.65	□□□□□ -1.67
YKT6	YKL196C	HSE1	P38753	452 aa		4.65	□□□□□ -1.67
YKT6	YKL196C	GPB2	P39717	880 aa		4.65	□□□□□ -1.67
YKT6	YKL196C	RAT1	Q02792	1006 aa	Known RBP	4.65	□□□□□ -1.67
YKT6	YKL196C	RKM2	Q03942	479 aa		4.65	□□□□□ -1.67
YKT6	YKL196C	GCR1	P07261	785 aa		4.64	□□□□□ -1.67
YKT6	YKL196C	YHL012W	P38709	493 aa		4.64	□□□□□ -1.67
YKT6	YKL196C	GNP1	P48813	663 aa		4.64	□□□□□ -1.67
YKT6	YKL196C	KIP1	P28742	1111 aa		4.63	□□□□□ -1.67
YKT6	YKL196C	PEP7	P32609	515 aa		4.63	□□□□□ -1.67
YKT6	YKL196C	EBP2	P36049	427 aa	Known RBP	4.63	□□□□□ -1.67
YKT6	YKL196C	ALG3	P38179	458 aa		4.63	□□□□□ -1.67
YKT6	YKL196C	HXT13	P39924	564 aa		4.63	□□□□□ -1.67
YKT6	YKL196C	HXT17	P53631	564 aa		4.63	□□□□□ -1.67
YKT6	YKL196C	HXT15	P54854	567 aa		4.63	□□□□□ -1.67
YKT6	YKL196C	OYE2	Q03558	400 aa	Known RBP	4.63	□□□□□ -1.67
YKT6	YKL196C	MRL1	Q06815	381 aa		4.63	□□□□□ -1.67
YKT6	YKL196C	RCL1	Q08096	367 aa	Predicted RBP	4.63	□□□□□ -1.67
YKT6	YKL196C	HRK1	Q08732	759 aa	Known RBP	4.63	□□□□□ -1.67
YKT6	YKL196C	PTC5	Q12511	572 aa		4.63	□□□□□ -1.67
YKT6	YKL196C	MNN4	P36044	1178 aa		4.62	□□□□□ -1.67
YKT6	YKL196C	IRC24	P40580	263 aa		4.62	□□□□□ -1.67
YKT6	YKL196C	VPS53	P47061	822 aa		4.62	□□□□□ -1.67
YKT6	YKL196C	GAS1	P22146	559 aa	Known RBP	4.61	□□□□□ -1.67
YKT6	YKL196C	MKK2	P32491	506 aa		4.61	□□□□□ -1.67
YKT6	YKL196C	YSC84	P32793	468 aa		4.61	□□□□□ -1.67
YKT6	YKL196C	ELM1	P32801	640 aa		4.61	□□□□□ -1.67
YKT6	YKL196C	ECL1	P48235	211 aa		4.61	□□□□□ -1.67
YKT6	YKL196C	SIW14	P53965	281 aa		4.61	□□□□□ -1.67
YKT6	YKL196C	AOS1	Q06624	347 aa		4.61	□□□□□ -1.67
YKT6	YKL196C	MDL2	P33311	773 aa		4.6	□□□□□ -1.67
YKT6	YKL196C	ORC3	P54790	616 aa		4.6	□□□□□ -1.67
YKT6	YKL196C	YDL177C	Q12257	170 aa		4.6	□□□□□ -1.67
YKT6	YKL196C	TAF13	P11747	167 aa		4.59	□□□□□ -1.67
YKT6	YKL196C	AIM26	P32858	118 aa		4.59	□□□□□ -1.67
YKT6	YKL196C	ETP1	P38748	585 aa	Known RBP	4.59	□□□□□ -1.67
YKT6	YKL196C	YFL054C	P43549	646 aa		4.59	□□□□□ -1.67
YKT6	YKL196C	ESF1	Q06344	628 aa	Known RBP	4.59	□□□□□ -1.67
YKT6	YKL196C	CDA2	Q06703	312 aa		4.59	□□□□□ -1.67
YKT6	YKL196C	TSA1	P34760	196 aa	Known RBP	4.58	□□□□□ -1.68
YKT6	YKL196C	RPS0B	P46654	252 aa	Known RBP	4.58	□□□□□ -1.68
YKT6	YKL196C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
YKT6	YKL196C	RSC58	Q07979	502 aa		4.58	□□□□□ -1.68
YKT6	YKL196C	SPO21	Q12411	609 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms