RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	FAA3	P39002	694 aa		4.32	□□□□□ -1.72
SPE1	YKL184W	SDH1	Q00711	640 aa		4.32	□□□□□ -1.72
SPE1	YKL184W	TPP1	Q03796	238 aa		4.32	□□□□□ -1.72
SPE1	YKL184W	NOP8	Q08287	484 aa	Predicted RBP	4.32	□□□□□ -1.72
SPE1	YKL184W	HRK1	Q08732	759 aa	Known RBP	4.32	□□□□□ -1.72
SPE1	YKL184W	TRE1	Q08919	783 aa		4.32	□□□□□ -1.72
SPE1	YKL184W	GCD1	P09032	578 aa	Predicted RBP	4.31	□□□□□ -1.72
SPE1	YKL184W	TAF13	P11747	167 aa		4.31	□□□□□ -1.72
SPE1	YKL184W	ADP1	P25371	1049 aa		4.31	□□□□□ -1.72
SPE1	YKL184W	VPS53	P47061	822 aa		4.31	□□□□□ -1.72
SPE1	YKL184W	YGL140C	P53120	1219 aa		4.31	□□□□□ -1.72
SPE1	YKL184W	RKM2	Q03942	479 aa		4.31	□□□□□ -1.72
SPE1	YKL184W	RAD2	P07276	1031 aa		4.3	□□□□□ -1.72
SPE1	YKL184W	RPS26A	P39938	119 aa	Known RBP	4.3	□□□□□ -1.72
SPE1	YKL184W	RPS26B	P39939	119 aa	Known RBP	4.3	□□□□□ -1.72
SPE1	YKL184W	OYE3	P41816	400 aa	Predicted RBP	4.3	□□□□□ -1.72
SPE1	YKL184W	CTH1	P47976	325 aa		4.3	□□□□□ -1.72
SPE1	YKL184W	YLR257W	Q06146	321 aa	Known RBP	4.3	□□□□□ -1.72
SPE1	YKL184W	EST2	Q06163	884 aa		4.3	□□□□□ -1.72
SPE1	YKL184W	TOS4	Q06266	489 aa		4.3	□□□□□ -1.72
SPE1	YKL184W	PUS7	Q08647	676 aa	Known RBP	4.3	□□□□□ -1.72
SPE1	YKL184W	YVC1	Q12324	675 aa		4.3	□□□□□ -1.72
SPE1	YKL184W	PEP7	P32609	515 aa		4.29	□□□□□ -1.72
SPE1	YKL184W	EAR1	Q03212	550 aa		4.29	□□□□□ -1.72
SPE1	YKL184W	RSA3	Q05942	220 aa	Known RBP	4.29	□□□□□ -1.72
SPE1	YKL184W	CYC8	P14922	966 aa		4.29	□□□□□ -1.72
SPE1	YKL184W	SEC23	P15303	768 aa	Known RBP	4.29	□□□□□ -1.72
SPE1	YKL184W	PRO1	P32264	428 aa		4.29	□□□□□ -1.72
SPE1	YKL184W	RDH54	P38086	958 aa		4.29	□□□□□ -1.72
SPE1	YKL184W	AVT1	P47082	602 aa		4.29	□□□□□ -1.72
SPE1	YKL184W	DED1	P06634	604 aa	Known RBP	4.28	□□□□□ -1.72
SPE1	YKL184W	ATE1	P16639	503 aa		4.28	□□□□□ -1.72
SPE1	YKL184W	YHL012W	P38709	493 aa		4.28	□□□□□ -1.72
SPE1	YKL184W	QNS1	P38795	714 aa	Known RBP	4.28	□□□□□ -1.72
SPE1	YKL184W	FOL2	P51601	243 aa	Known RBP	4.28	□□□□□ -1.72
SPE1	YKL184W	SSY1	Q03770	852 aa		4.28	□□□□□ -1.72
SPE1	YKL184W	POL12	P38121	705 aa	Predicted RBP	4.27	□□□□□ -1.73
SPE1	YKL184W	PTC7	P38797	343 aa		4.27	□□□□□ -1.73
SPE1	YKL184W	NMD3	P38861	518 aa	Known RBP	4.27	□□□□□ -1.73
SPE1	YKL184W	PIC2	P40035	300 aa		4.27	□□□□□ -1.73
SPE1	YKL184W	YJR107W	P47145	328 aa		4.27	□□□□□ -1.73
SPE1	YKL184W	ECL1	P48235	211 aa		4.27	□□□□□ -1.73
SPE1	YKL184W	ESF1	Q06344	628 aa	Known RBP	4.27	□□□□□ -1.73
SPE1	YKL184W	PTC5	Q12511	572 aa		4.27	□□□□□ -1.73
SPE1	YKL184W	RAD27	P26793	382 aa		4.26	□□□□□ -1.73
SPE1	YKL184W	MCM2	P29469	868 aa		4.26	□□□□□ -1.73
SPE1	YKL184W	SEC8	P32855	1065 aa		4.26	□□□□□ -1.73
SPE1	YKL184W	MDL2	P33311	773 aa		4.26	□□□□□ -1.73
SPE1	YKL184W	HSP78	P33416	811 aa		4.26	□□□□□ -1.73
SPE1	YKL184W	IRC24	P40580	263 aa		4.26	□□□□□ -1.73
SPE1	YKL184W	GTS1	P40956	396 aa		4.26	□□□□□ -1.73
SPE1	YKL184W	MRL1	Q06815	381 aa		4.26	□□□□□ -1.73
SPE1	YKL184W	NBA1	Q08229	501 aa	Known RBP	4.26	□□□□□ -1.73
SPE1	YKL184W	PEX7	P39108	375 aa		4.25	□□□□□ -1.73
SPE1	YKL184W	ENT3	P47160	408 aa		4.25	□□□□□ -1.73
SPE1	YKL184W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
SPE1	YKL184W	RMD1	Q03441	430 aa		4.25	□□□□□ -1.73
SPE1	YKL184W	SPR28	Q04921	423 aa		4.25	□□□□□ -1.73
SPE1	YKL184W	HDA2	Q06629	674 aa		4.25	□□□□□ -1.73
SPE1	YKL184W	DFG16	Q99234	619 aa		4.25	□□□□□ -1.73
SPE1	YKL184W	HEM13	P11353	328 aa	Known RBP	4.24	□□□□□ -1.73
SPE1	YKL184W	YJL045W	P47052	634 aa		4.24	□□□□□ -1.73
SPE1	YKL184W	SIW14	P53965	281 aa		4.24	□□□□□ -1.73
SPE1	YKL184W	OYE2	Q03558	400 aa	Known RBP	4.24	□□□□□ -1.73
SPE1	YKL184W	COQ4	O13525	335 aa		4.23	□□□□□ -1.73
SPE1	YKL184W	SRO9	P25567	434 aa	Known RBP	4.23	□□□□□ -1.73
SPE1	YKL184W	YSC84	P32793	468 aa		4.23	□□□□□ -1.73
SPE1	YKL184W	ALG3	P38179	458 aa		4.23	□□□□□ -1.73
SPE1	YKL184W	CCZ1	P38273	704 aa		4.23	□□□□□ -1.73
SPE1	YKL184W	RRP15	Q06511	250 aa	Predicted RBP	4.23	□□□□□ -1.73
SPE1	YKL184W	KIP1	P28742	1111 aa		4.22	□□□□□ -1.73
SPE1	YKL184W	AIM26	P32858	118 aa		4.22	□□□□□ -1.73
SPE1	YKL184W	SEA4	P38164	1038 aa		4.22	□□□□□ -1.73
SPE1	YKL184W	FYV10	P40492	516 aa		4.22	□□□□□ -1.73
SPE1	YKL184W	PRP43	P53131	767 aa	Known RBP	4.22	□□□□□ -1.73
SPE1	YKL184W	ORC3	P54790	616 aa		4.22	□□□□□ -1.73
SPE1	YKL184W	ROD1	Q02805	837 aa		4.22	□□□□□ -1.73
SPE1	YKL184W	HOS3	Q02959	697 aa	Known RBP	4.22	□□□□□ -1.73
SPE1	YKL184W	RSB1	Q08417	382 aa		4.22	□□□□□ -1.73
SPE1	YKL184W	YPL260W	Q08977	551 aa		4.22	□□□□□ -1.73
SPE1	YKL184W	GCR1	P07261	785 aa		4.21	□□□□□ -1.73
SPE1	YKL184W	SAM35	P14693	329 aa		4.21	□□□□□ -1.73
SPE1	YKL184W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.73	not detected
SPE1	YKL184W	SYP1	P25623	870 aa	Known RBP	4.21	□□□□□ -1.73
SPE1	YKL184W	SEG2	P34250	1132 aa		4.21	□□□□□ -1.73
SPE1	YKL184W	LRG1	P35688	1017 aa		4.21	□□□□□ -1.73
SPE1	YKL184W	TNA1	P53322	534 aa		4.21	□□□□□ -1.73
SPE1	YKL184W	AOS1	Q06624	347 aa		4.21	□□□□□ -1.73
SPE1	YKL184W	RTT10	Q08924	1013 aa		4.21	□□□□□ -1.73
SPE1	YKL184W	TMA46	Q12000	345 aa	Known RBP	4.21	□□□□□ -1.73
SPE1	YKL184W	NAP1	P25293	417 aa	Known RBP	4.21	□□□□□ -1.74
SPE1	YKL184W	MKK2	P32491	506 aa		4.21	□□□□□ -1.74
SPE1	YKL184W	AFG2	P32794	780 aa		4.21	□□□□□ -1.74
SPE1	YKL184W	ELM1	P32801	640 aa		4.21	□□□□□ -1.74
SPE1	YKL184W	PET112	P33893	541 aa		4.21	□□□□□ -1.74
SPE1	YKL184W	YOR352W	Q08816	343 aa		4.21	□□□□□ -1.74
SPE1	YKL184W	SPO21	Q12411	609 aa		4.21	□□□□□ -1.74
SPE1	YKL184W	SPS1	P08458	490 aa		4.2	□□□□□ -1.74
SPE1	YKL184W	RGD1	P38339	666 aa		4.2	□□□□□ -1.74
SPE1	YKL184W	GPB2	P39717	880 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms