RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W GAS1P22146 559 aaKnown RBP5.29□□□□□ -1.56
VMA5YKL080W XKS1P42826 600 aa5.29□□□□□ -1.56
VMA5YKL080W UTP5Q04177 643 aaKnown RBP5.29□□□□□ -1.56
VMA5YKL080W NSI1Q12457 570 aa5.29□□□□□ -1.56
VMA5YKL080W ARL1P38116 183 aaKnown RBP5.28□□□□□ -1.56
VMA5YKL080W YAR028WP39548 234 aa5.28□□□□□ -1.56
VMA5YKL080W TAF1P46677 1066 aa5.28□□□□□ -1.56
VMA5YKL080W ADI1Q03677 179 aa5.28□□□□□ -1.56
VMA5YKL080W ATE1P16639 503 aa5.27□□□□□ -1.57
VMA5YKL080W MCM2P29469 868 aa5.27□□□□□ -1.57
VMA5YKL080W SMY2P32909 740 aaKnown RBP5.27□□□□□ -1.57
VMA5YKL080W THI80P35202 319 aa5.27□□□□□ -1.57
VMA5YKL080W ALT1P52893 592 aa5.27□□□□□ -1.57
VMA5YKL080W HXK1P04806 485 aaKnown RBP5.26□□□□□ -1.57
VMA5YKL080W DED1P06634 604 aaKnown RBP5.26□□□□□ -1.57
VMA5YKL080W RET1P22276 1149 aaKnown RBP5.26□□□□□ -1.57
VMA5YKL080W NNK1P36003 928 aa5.26□□□□□ -1.57
VMA5YKL080W MGE1P38523 228 aa5.26□□□□□ -1.57
VMA5YKL080W RPS26AP39938 119 aaKnown RBP5.26□□□□□ -1.57
VMA5YKL080W RPS26BP39939 119 aaKnown RBP5.26□□□□□ -1.57
VMA5YKL080W YGL140CP53120 1219 aa5.26□□□□□ -1.57
VMA5YKL080W YPL109CQ02981 657 aa5.26□□□□□ -1.57
VMA5YKL080W TPP1Q03796 238 aa5.26□□□□□ -1.57
VMA5YKL080W ESC8Q08119 714 aa5.26□□□□□ -1.57
VMA5YKL080W YOR059CQ08448 450 aaKnown RBP5.26□□□□□ -1.57
VMA5YKL080W PIC2P40035 300 aa5.25□□□□□ -1.57
VMA5YKL080W YLR257WQ06146 321 aaKnown RBP5.25□□□□□ -1.57
VMA5YKL080W LAP2Q10740 671 aa5.25□□□□□ -1.57
VMA5YKL080W YVC1Q12324 675 aa5.25□□□□□ -1.57
VMA5YKL080W HEM13P11353 328 aaKnown RBP5.24□□□□□ -1.57
VMA5YKL080W VMA4P22203 233 aaKnown RBP5.24□□□□□ -1.57
VMA5YKL080W PEX7P39108 375 aa5.24□□□□□ -1.57
VMA5YKL080W MRPS18P42847 217 aa5.24□□□□□ -1.57
VMA5YKL080W ORC3P54790 616 aa5.24□□□□□ -1.57
VMA5YKL080W SSY1Q03770 852 aa5.24□□□□□ -1.57
VMA5YKL080W TRE1Q08919 783 aa5.24□□□□□ -1.57
VMA5YKL080W LPX1Q12405 387 aaKnown RBP5.24□□□□□ -1.57
VMA5YKL080W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
VMA5YKL080W PRE9P23638 258 aaKnown RBP5.23□□□□□ -1.57
VMA5YKL080W PRO1P32264 428 aa5.23□□□□□ -1.57
VMA5YKL080W PRP43P53131 767 aaKnown RBP5.23□□□□□ -1.57
VMA5YKL080W SPR28Q04921 423 aa5.23□□□□□ -1.57
VMA5YKL080W PUS7Q08647 676 aaKnown RBP5.23□□□□□ -1.57
VMA5YKL080W RAD2P07276 1031 aa5.22□□□□□ -1.57
VMA5YKL080W ADP1P25371 1049 aa5.22□□□□□ -1.57
VMA5YKL080W HEM3P28789 327 aa5.22□□□□□ -1.57
VMA5YKL080W PEP7P32609 515 aa5.22□□□□□ -1.57
VMA5YKL080W YKL222CP35995 705 aa5.22□□□□□ -1.57
VMA5YKL080W ADD66P36040 267 aa5.22□□□□□ -1.57
VMA5YKL080W HSE1P38753 452 aa5.22□□□□□ -1.57
VMA5YKL080W YGR122WP53272 402 aa5.22□□□□□ -1.57
VMA5YKL080W EST2Q06163 884 aa5.22□□□□□ -1.57
VMA5YKL080W NOP8Q08287 484 aaPredicted RBP5.22□□□□□ -1.57
VMA5YKL080W PTC7P38797 343 aa5.21□□□□□ -1.58
VMA5YKL080W GTS1P40956 396 aa5.21□□□□□ -1.58
VMA5YKL080W RSA3Q05942 220 aaKnown RBP5.21□□□□□ -1.58
VMA5YKL080W CYC8P14922 966 aa5.2□□□□□ -1.58
VMA5YKL080W SEC8P32855 1065 aa5.2□□□□□ -1.58
VMA5YKL080W RDH54P38086 958 aa5.2□□□□□ -1.58
VMA5YKL080W MCD1Q12158 566 aa5.2□□□□□ -1.58
VMA5YKL080W QNS1P38795 714 aaKnown RBP5.19□□□□□ -1.58
VMA5YKL080W GIP4P39732 760 aa5.19□□□□□ -1.58
VMA5YKL080W FYV10P40492 516 aa5.19□□□□□ -1.58
VMA5YKL080W SEC23P15303 768 aaKnown RBP5.18□□□□□ -1.58
VMA5YKL080W YJL045WP47052 634 aa5.18□□□□□ -1.58
VMA5YKL080W ROD1Q02805 837 aa5.18□□□□□ -1.58
VMA5YKL080W HDA2Q06629 674 aa5.18□□□□□ -1.58
VMA5YKL080W FLR1P38124 548 aa5.17□□□□□ -1.58
VMA5YKL080W YHL012WP38709 493 aa5.17□□□□□ -1.58
VMA5YKL080W GPB2P39717 880 aa5.17□□□□□ -1.58
VMA5YKL080W OYE2Q03558 400 aaKnown RBP5.17□□□□□ -1.58
VMA5YKL080W MRL1Q06815 381 aa5.17□□□□□ -1.58
VMA5YKL080W HRK1Q08732 759 aaKnown RBP5.17□□□□□ -1.58
VMA5YKL080W YDL177CQ12257 170 aa5.17□□□□□ -1.58
VMA5YKL080W PTC5Q12511 572 aa5.17□□□□□ -1.58
VMA5YKL080W GCR1P07261 785 aa5.16□□□□□ -1.58
VMA5YKL080W PRP6P19735 899 aaPredicted RBP5.16□□□□□ -1.58
VMA5YKL080W AFG2P32794 780 aa5.16□□□□□ -1.58
VMA5YKL080W YJR107WP47145 328 aa5.16□□□□□ -1.58
VMA5YKL080W RRP15Q06511 250 aaPredicted RBP5.16□□□□□ -1.58
VMA5YKL080W KIP1P28742 1111 aa5.15□□□□□ -1.59
VMA5YKL080W ALG3P38179 458 aa5.15□□□□□ -1.59
VMA5YKL080W VPS53P47061 822 aa5.15□□□□□ -1.59
VMA5YKL080W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
VMA5YKL080W RAT1Q02792 1006 aaKnown RBP5.15□□□□□ -1.59
VMA5YKL080W RKM2Q03942 479 aa5.15□□□□□ -1.59
VMA5YKL080W AIM26P32858 118 aa5.14□□□□□ -1.59
VMA5YKL080W AIM3P38266 947 aaKnown RBP5.14□□□□□ -1.59
VMA5YKL080W SAM35P14693 329 aa5.13□□□□□ -1.59
VMA5YKL080W YSC84P32793 468 aa5.12□□□□□ -1.59
VMA5YKL080W RCL1Q08096 367 aaPredicted RBP5.12□□□□□ -1.59
VMA5YKL080W MKK2P32491 506 aa5.11□□□□□ -1.59
VMA5YKL080W MDL2P33311 773 aa5.11□□□□□ -1.59
VMA5YKL080W ETP1P38748 585 aaKnown RBP5.11□□□□□ -1.59
VMA5YKL080W MRPL22P53881 309 aa5.11□□□□□ -1.59
VMA5YKL080W ESF1Q06344 628 aaKnown RBP5.11□□□□□ -1.59
VMA5YKL080W ASF1P32447 279 aa5.1□□□□□ -1.59
VMA5YKL080W FOL2P51601 243 aaKnown RBP5.1□□□□□ -1.59
VMA5YKL080W SIW14P53965 281 aa5.1□□□□□ -1.59
VMA5YKL080W SPO21Q12411 609 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms