RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeastyeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRL1YJL087C NIT1P40447 199 aa2.49□□□□□ -2.01
TRL1YJL087C BDP1P46678 594 aa2.49□□□□□ -2.01
TRL1YJL087C YGL140CP53120 1219 aa2.49□□□□□ -2.01
TRL1YJL087C MDM12Q92328 271 aa2.49□□□□□ -2.01
TRL1YJL087C SEC23P15303 768 aaKnown RBP2.48□□□□□ -2.01
TRL1YJL087C RPC31P17890 251 aa2.48□□□□□ -2.01
TRL1YJL087C MRT4P33201 236 aaKnown RBP2.48□□□□□ -2.01
TRL1YJL087C MKS1P34072 584 aa2.48□□□□□ -2.01
TRL1YJL087C RDH54P38086 958 aa2.48□□□□□ -2.01
TRL1YJL087C GIP1P38229 639 aa2.48□□□□□ -2.01
TRL1YJL087C AMN1P38285 549 aaPredicted RBP2.48□□□□□ -2.01
TRL1YJL087C RPT2P40327 437 aaKnown RBP2.48□□□□□ -2.01
TRL1YJL087C ALO1P54783 526 aaKnown RBP2.48□□□□□ -2.01
TRL1YJL087C UME1Q03010 460 aa2.48□□□□□ -2.01
TRL1YJL087C MTC5Q03897 1148 aa2.48□□□□□ -2.01
TRL1YJL087C TAF13P11747 167 aa2.48□□□□□ -2.01
TRL1YJL087C PRP5P21372 849 aaPredicted RBP2.48□□□□□ -2.01
TRL1YJL087C MLF3P32047 452 aa2.48□□□□□ -2.01
TRL1YJL087C KAP122P32767 1081 aa2.48□□□□□ -2.01
TRL1YJL087C YBL086CP38177 466 aa2.48□□□□□ -2.01
TRL1YJL087C APM2P38700 605 aa2.48□□□□□ -2.01
TRL1YJL087C SEC26P41810 973 aaKnown RBP2.48□□□□□ -2.01
TRL1YJL087C REC8Q12188 680 aa2.48□□□□□ -2.01
TRL1YJL087C CMR1Q12510 522 aaKnown RBP2.48□□□□□ -2.01
TRL1YJL087C SST2P11972 698 aaKnown RBP2.47□□□□□ -2.01
TRL1YJL087C MEF1P25039 761 aa2.47□□□□□ -2.01
TRL1YJL087C LYP1P32487 611 aa2.47□□□□□ -2.01
TRL1YJL087C NFU1P32860 256 aa2.47□□□□□ -2.01
TRL1YJL087C MTC2P34246 357 aa2.47□□□□□ -2.01
TRL1YJL087C BSD2P38356 321 aa2.47□□□□□ -2.01
TRL1YJL087C RIM11P38615 370 aa2.47□□□□□ -2.01
TRL1YJL087C PEX28P38848 579 aa2.47□□□□□ -2.01
TRL1YJL087C GEM1P39722 662 aa2.47□□□□□ -2.01
TRL1YJL087C DLD3P39976 496 aaKnown RBP2.47□□□□□ -2.01
TRL1YJL087C PEA2P40091 420 aa2.47□□□□□ -2.01
TRL1YJL087C MGS1P40151 587 aa2.47□□□□□ -2.01
TRL1YJL087C BRE2P43132 505 aa2.47□□□□□ -2.01
TRL1YJL087C SIW14P53965 281 aa2.47□□□□□ -2.01
TRL1YJL087C YOR296WQ08748 1289 aa2.47□□□□□ -2.01
TRL1YJL087C NYV1Q12255 253 aa2.47□□□□□ -2.01
TRL1YJL087C MPD2Q99316 277 aa2.47□□□□□ -2.01
TRL1YJL087C PGI1P12709 554 aaKnown RBP2.47□□□□□ -2.01
TRL1YJL087C PYC2P32327 1180 aaKnown RBP2.47□□□□□ -2.01
TRL1YJL087C PLC1P32383 869 aa2.47□□□□□ -2.01
TRL1YJL087C RPN12P32496 274 aa2.47□□□□□ -2.01
TRL1YJL087C HBS1P32769 611 aaKnown RBP2.47□□□□□ -2.01
TRL1YJL087C YBR287WP38355 427 aa2.47□□□□□ -2.01
TRL1YJL087C AIM46P38885 310 aa2.47□□□□□ -2.01
TRL1YJL087C SSN3P39073 555 aa2.47□□□□□ -2.01
TRL1YJL087C KRI1P42846 591 aaKnown RBP2.47□□□□□ -2.01
TRL1YJL087C ALR2P43553 858 aa2.47□□□□□ -2.01
TRL1YJL087C PIP2P52960 996 aa2.47□□□□□ -2.01
TRL1YJL087C ESF2P53743 316 aaKnown RBP2.47□□□□□ -2.01
TRL1YJL087C YNL034WP53963 612 aa2.47□□□□□ -2.01
TRL1YJL087C YNL018CP53976 612 aa2.47□□□□□ -2.01
TRL1YJL087C UBX4P54730 416 aa2.47□□□□□ -2.01
TRL1YJL087C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
TRL1YJL087C DFG5Q05031 458 aa2.47□□□□□ -2.01
TRL1YJL087C ENT2Q05785 613 aa2.47□□□□□ -2.01
TRL1YJL087C PUS5Q06244 254 aa2.47□□□□□ -2.01
TRL1YJL087C GIC2Q06648 383 aa2.47□□□□□ -2.01
TRL1YJL087C HBN1Q96VH4 193 aa2.47□□□□□ -2.01
TRL1YJL087C GAL1P04385 528 aa2.46□□□□□ -2.02
TRL1YJL087C ARG82P07250 355 aa2.46□□□□□ -2.02
TRL1YJL087C YKL222CP35995 705 aa2.46□□□□□ -2.02
TRL1YJL087C TYS1P36421 394 aaKnown RBP2.46□□□□□ -2.02
TRL1YJL087C YIL165CP40446 119 aa2.46□□□□□ -2.02
TRL1YJL087C HOS4P40480 1083 aa2.46□□□□□ -2.02
TRL1YJL087C MTR4P47047 1073 aaKnown RBP2.46□□□□□ -2.02
TRL1YJL087C ENT3P47160 408 aa2.46□□□□□ -2.02
TRL1YJL087C PMT7Q06644 662 aa2.46□□□□□ -2.02
TRL1YJL087C MPH2P0CD99 609 aa2.46□□□□□ -2.02
TRL1YJL087C TOP3P13099 656 aa2.46□□□□□ -2.02
TRL1YJL087C MSH3P25336 1018 aa2.46□□□□□ -2.02
TRL1YJL087C PIN4P34217 668 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
TRL1YJL087C TRZ1P36159 838 aaPredicted RBP2.46□□□□□ -2.02
TRL1YJL087C SHM1P37292 490 aaPredicted RBP2.46□□□□□ -2.02
TRL1YJL087C BAP2P38084 609 aa2.46□□□□□ -2.02
TRL1YJL087C RRP8P38961 392 aaKnown RBP2.46□□□□□ -2.02
TRL1YJL087C CCC2P38995 1004 aa2.46□□□□□ -2.02
TRL1YJL087C MBP1P39678 833 aa2.46□□□□□ -2.02
TRL1YJL087C PEX14P53112 341 aa2.46□□□□□ -2.02
TRL1YJL087C FAP7Q12055 197 aaPredicted RBP2.46□□□□□ -2.02
TRL1YJL087C YPL066WQ12194 479 aa2.46□□□□□ -2.02
TRL1YJL087C RRI2Q12348 645 aa2.46□□□□□ -2.02
TRL1YJL087C RAS1P01119 309 aa2.45□□□□□ -2.02
TRL1YJL087C TOA1P32773 286 aa2.45□□□□□ -2.02
TRL1YJL087C HSP78P33416 811 aa2.45□□□□□ -2.02
TRL1YJL087C ECM2P38241 364 aaKnown RBP2.45□□□□□ -2.02
TRL1YJL087C RSM26P47141 266 aa2.45□□□□□ -2.02
TRL1YJL087C SPC105P53148 917 aa2.45□□□□□ -2.02
TRL1YJL087C SDA1P53313 767 aaKnown RBP2.45□□□□□ -2.02
TRL1YJL087C MET14Q02196 202 aa2.45□□□□□ -2.02
TRL1YJL087C MTQ2Q03920 221 aaPredicted RBP2.45□□□□□ -2.02
TRL1YJL087C TIF35Q04067 274 aaKnown RBP2.45□□□□□ -2.02
TRL1YJL087C HFD1Q04458 532 aa2.45□□□□□ -2.02
TRL1YJL087C YDL124WQ07551 312 aaKnown RBP2.45□□□□□ -2.02
TRL1YJL087C RRP6Q12149 733 aaKnown RBP2.45□□□□□ -2.02
TRL1YJL087C ERP4Q12450 207 aa2.45□□□□□ -2.02
TRL1YJL087C NUP145P49687 1317 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms