RNA–Protein interactions for RNA: YGL056C

SDS23, Transcript of Protein involved in cell separation during budding, yeast

Gene SDS23, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS23	YGL056C	ABD1	P32783	436 aa	Predicted RBP	4.91	□□□□□ -1.62
SDS23	YGL056C	SEA4	P38164	1038 aa		4.91	□□□□□ -1.62
SDS23	YGL056C	UBP12	P39538	1254 aa		4.91	□□□□□ -1.62
SDS23	YGL056C	NUG1	P40010	520 aa	Known RBP	4.91	□□□□□ -1.62
SDS23	YGL056C	MSH4	P40965	878 aa	Predicted RBP	4.91	□□□□□ -1.62
SDS23	YGL056C	YGL081W	P53156	320 aa		4.91	□□□□□ -1.62
SDS23	YGL056C	FMP25	Q08023	583 aa		4.91	□□□□□ -1.62
SDS23	YGL056C	GAL11	P19659	1081 aa		4.9	□□□□□ -1.63
SDS23	YGL056C	AGP1	P25376	633 aa		4.9	□□□□□ -1.63
SDS23	YGL056C	RAD27	P26793	382 aa		4.9	□□□□□ -1.63
SDS23	YGL056C	MRPL16	P38064	232 aa		4.9	□□□□□ -1.63
SDS23	YGL056C	NOG1	Q02892	647 aa	Known RBP	4.9	□□□□□ -1.63
SDS23	YGL056C	CIT1	P00890	479 aa		4.89	□□□□□ -1.63
SDS23	YGL056C	CAN1	P04817	590 aa		4.89	□□□□□ -1.63
SDS23	YGL056C	PRP5	P21372	849 aa	Predicted RBP	4.89	□□□□□ -1.63
SDS23	YGL056C	LYP1	P32487	611 aa		4.89	□□□□□ -1.63
SDS23	YGL056C	RER2	P35196	286 aa		4.89	□□□□□ -1.63
SDS23	YGL056C	VBA5	P36172	582 aa		4.89	□□□□□ -1.63
SDS23	YGL056C	APM2	P38700	605 aa		4.89	□□□□□ -1.63
SDS23	YGL056C	PFD1	P46988	109 aa		4.89	□□□□□ -1.63
SDS23	YGL056C	DNM1	P54861	757 aa		4.89	□□□□□ -1.63
SDS23	YGL056C	PEX13	P80667	386 aa		4.89	□□□□□ -1.63
SDS23	YGL056C	SHE9	Q04172	456 aa		4.89	□□□□□ -1.63
SDS23	YGL056C	SPO75	Q07798	868 aa		4.89	□□□□□ -1.63
SDS23	YGL056C	REC8	Q12188	680 aa		4.89	□□□□□ -1.63
SDS23	YGL056C	OSH2	Q12451	1283 aa		4.89	□□□□□ -1.63
SDS23	YGL056C	HSP60	P19882	572 aa	Known RBP	4.88	□□□□□ -1.63
SDS23	YGL056C	NPR1	P22211	790 aa		4.88	□□□□□ -1.63
SDS23	YGL056C	MSH3	P25336	1018 aa		4.88	□□□□□ -1.63
SDS23	YGL056C	SBA1	P28707	216 aa	Known RBP	4.88	□□□□□ -1.63
SDS23	YGL056C	MRP8	P35719	219 aa		4.88	□□□□□ -1.63
SDS23	YGL056C	SIW14	P53965	281 aa		4.88	□□□□□ -1.63
SDS23	YGL056C	TY1A-DR2	Q03964	440 aa	Known RBP	4.88	□□□□□ -1.63
SDS23	YGL056C	TCB3	Q03640	1545 aa	Known RBP	4.88	□□□□□ -1.63
SDS23	YGL056C	TAF13	P11747	167 aa		4.87	□□□□□ -1.63
SDS23	YGL056C	SRM1	P21827	482 aa		4.87	□□□□□ -1.63
SDS23	YGL056C	RDH54	P38086	958 aa		4.87	□□□□□ -1.63
SDS23	YGL056C	GGA2	P38817	585 aa	Known RBP	4.87	□□□□□ -1.63
SDS23	YGL056C	YEN1	P40028	759 aa		4.87	□□□□□ -1.63
SDS23	YGL056C	IRR1	P40541	1150 aa		4.87	□□□□□ -1.63
SDS23	YGL056C	PPT1	P53043	513 aa		4.87	□□□□□ -1.63
SDS23	YGL056C	SPO20	Q04359	397 aa		4.87	□□□□□ -1.63
SDS23	YGL056C	YLR225C	Q05948	407 aa	Known RBP	4.87	□□□□□ -1.63
SDS23	YGL056C	NOP14	Q99207	810 aa	Known RBP	4.87	□□□□□ -1.63
SDS23	YGL056C	CRP1	P38845	465 aa	Known RBP	4.87	□□□□□ -1.63
SDS23	YGL056C	YER156C	P40093	338 aa	Known RBP	4.87	□□□□□ -1.63
SDS23	YGL056C	AVT1	P47082	602 aa		4.87	□□□□□ -1.63
SDS23	YGL056C	RTA1	P53047	317 aa		4.87	□□□□□ -1.63
SDS23	YGL056C	ROD1	Q02805	837 aa		4.87	□□□□□ -1.63
SDS23	YGL056C	GLO4	Q12320	285 aa		4.87	□□□□□ -1.63
SDS23	YGL056C	FUS1	P11710	512 aa		4.86	□□□□□ -1.63
SDS23	YGL056C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
SDS23	YGL056C	MOT2	P34909	587 aa	Known RBP	4.86	□□□□□ -1.63
SDS23	YGL056C	ERP6	P53198	216 aa		4.86	□□□□□ -1.63
SDS23	YGL056C	TAF8	Q03750	510 aa		4.86	□□□□□ -1.63
SDS23	YGL056C	EAF1	Q06337	982 aa		4.86	□□□□□ -1.63
SDS23	YGL056C	NTG2	Q08214	380 aa		4.86	□□□□□ -1.63
SDS23	YGL056C	IDI1	P15496	288 aa		4.85	□□□□□ -1.63
SDS23	YGL056C	ARE1	P25628	610 aa		4.85	□□□□□ -1.63
SDS23	YGL056C	MSH2	P25847	964 aa		4.85	□□□□□ -1.63
SDS23	YGL056C	EXO5	P38289	585 aa		4.85	□□□□□ -1.63
SDS23	YGL056C	INO1	P11986	533 aa		4.84	□□□□□ -1.63
SDS23	YGL056C	BET3	P36149	193 aa		4.84	□□□□□ -1.63
SDS23	YGL056C	NCL1	P38205	684 aa	Known RBP	4.84	□□□□□ -1.63
SDS23	YGL056C	PBY1	P38254	753 aa		4.84	□□□□□ -1.63
SDS23	YGL056C	KRI1	P42846	591 aa	Known RBP	4.84	□□□□□ -1.63
SDS23	YGL056C	ENT3	P47160	408 aa		4.84	□□□□□ -1.63
SDS23	YGL056C	ZDS1	P50111	915 aa	Known RBP	4.84	□□□□□ -1.63
SDS23	YGL056C	UTP8	P53276	713 aa	Known RBP	4.84	□□□□□ -1.63
SDS23	YGL056C	YOL057W	Q08225	711 aa		4.84	□□□□□ -1.63
SDS23	YGL056C	ADR1	P07248	1323 aa		4.84	□□□□□ -1.64
SDS23	YGL056C	HVG1	P0CE11	249 aa		4.83	□□□□□ -1.64
SDS23	YGL056C	RPL8A	P17076	256 aa	Known RBP	4.83	□□□□□ -1.64
SDS23	YGL056C	MKK2	P32491	506 aa		4.83	□□□□□ -1.64
SDS23	YGL056C	TFA2	P36145	328 aa		4.83	□□□□□ -1.64
SDS23	YGL056C	BUD9	P53226	547 aa		4.83	□□□□□ -1.64
SDS23	YGL056C	YNR029C	P53729	429 aa	Known RBP	4.83	□□□□□ -1.64
SDS23	YGL056C	YPL066W	Q12194	479 aa		4.83	□□□□□ -1.64
SDS23	YGL056C	DED1	P06634	604 aa	Known RBP	4.82	□□□□□ -1.64
SDS23	YGL056C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.82	□□□□□ -1.64
SDS23	YGL056C	TY1A-DR6	P0CX70	440 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	TY1A-ER1	P0CX71	440 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	TY1A-LR2	P0CX72	440 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	TY1A-PL	P0CX73	440 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	TY1A-JR1	P0CX74	440 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	TY1A-LR3	P0CX75	440 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	TY1A-ML2	P0CX76	440 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	SWE1	P32944	819 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	SHU2	P38957	223 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	HUL4	P40985	892 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	ALR2	P43553	858 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	YJL181W	P46987	611 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	TIF35	Q04067	274 aa	Known RBP	4.82	□□□□□ -1.64
SDS23	YGL056C	TY1A-GR1	Q12085	440 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.82	□□□□□ -1.64
SDS23	YGL056C	TY1A-OL	Q92392	440 aa	Known RBP	4.82	□□□□□ -1.64
SDS23	YGL056C	INP51	P40559	946 aa	Known RBP	4.82	□□□□□ -1.64
SDS23	YGL056C	MAL11	P53048	616 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	RSC2	Q06488	889 aa		4.82	□□□□□ -1.64
SDS23	YGL056C	VMA4	P22203	233 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 89 ms