RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C PRP9P19736 530 aaKnown RBP5.11□□□□□ -1.59
SPB4YFL002C VMA4P22203 233 aaKnown RBP5.11□□□□□ -1.59
SPB4YFL002C PEX6P33760 1030 aa5.11□□□□□ -1.59
SPB4YFL002C GEM1P39722 662 aa5.11□□□□□ -1.59
SPB4YFL002C ALR2P43553 858 aa5.11□□□□□ -1.59
SPB4YFL002C MSB3P48566 633 aaPredicted RBP5.11□□□□□ -1.59
SPB4YFL002C YNR040WP53736 256 aa5.11□□□□□ -1.59
SPB4YFL002C ROD1Q02805 837 aa5.11□□□□□ -1.59
SPB4YFL002C TFB2Q02939 513 aa5.11□□□□□ -1.59
SPB4YFL002C ATG13Q06628 738 aa5.11□□□□□ -1.59
SPB4YFL002C YDL124WQ07551 312 aaKnown RBP5.11□□□□□ -1.59
SPB4YFL002C YDL176WQ12027 708 aa5.11□□□□□ -1.59
SPB4YFL002C INO1P11986 533 aa5.11□□□□□ -1.59
SPB4YFL002C PUF4P25339 888 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
SPB4YFL002C PIN4P34217 668 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
SPB4YFL002C GDH3P39708 457 aa5.11□□□□□ -1.59
SPB4YFL002C HLJ1P48353 224 aa5.11□□□□□ -1.59
SPB4YFL002C PEX8P53248 589 aa5.11□□□□□ -1.59
SPB4YFL002C MTR4P47047 1073 aaKnown RBP5.1□□□□□ -1.59
SPB4YFL002C PMT3P47190 753 aa5.1□□□□□ -1.59
SPB4YFL002C MAL11P53048 616 aa5.1□□□□□ -1.59
SPB4YFL002C GLO4Q12320 285 aa5.1□□□□□ -1.59
SPB4YFL002C RKM4Q12504 494 aa5.1□□□□□ -1.59
SPB4YFL002C MKK2P32491 506 aa5.09□□□□□ -1.59
SPB4YFL002C MOT2P34909 587 aaKnown RBP5.09□□□□□ -1.59
SPB4YFL002C EXO5P38289 585 aa5.09□□□□□ -1.59
SPB4YFL002C SNF7P39929 240 aaKnown RBP5.09□□□□□ -1.59
SPB4YFL002C YER156CP40093 338 aaKnown RBP5.09□□□□□ -1.59
SPB4YFL002C YGR237CP50089 785 aa5.09□□□□□ -1.59
SPB4YFL002C TIF35Q04067 274 aaKnown RBP5.09□□□□□ -1.59
SPB4YFL002C FUS1P11710 512 aa5.09□□□□□ -1.6
SPB4YFL002C PPT1P53043 513 aa5.09□□□□□ -1.6
SPB4YFL002C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.09□□□□□ -1.6not detected
SPB4YFL002C RSC2Q06488 889 aa5.09□□□□□ -1.6
SPB4YFL002C GIC2Q06648 383 aa5.09□□□□□ -1.6
SPB4YFL002C TMA17Q12513 150 aa5.09□□□□□ -1.6
SPB4YFL002C SRF1Q12516 437 aa5.09□□□□□ -1.6
SPB4YFL002C SYP1P25623 870 aaKnown RBP5.08□□□□□ -1.6
SPB4YFL002C PWP2P25635 923 aaKnown RBP5.08□□□□□ -1.6
SPB4YFL002C YKL107WP34251 309 aa5.08□□□□□ -1.6
SPB4YFL002C YKL077WP36081 392 aa5.08□□□□□ -1.6
SPB4YFL002C NCL1P38205 684 aaKnown RBP5.08□□□□□ -1.6
SPB4YFL002C YNL193WP53870 558 aa5.08□□□□□ -1.6
SPB4YFL002C HVG1P0CE11 249 aa5.07□□□□□ -1.6
SPB4YFL002C KAR1P11927 433 aa5.07□□□□□ -1.6
SPB4YFL002C DLD1P32891 587 aa5.07□□□□□ -1.6
SPB4YFL002C MBP1P39678 833 aa5.07□□□□□ -1.6
SPB4YFL002C YGL176CP46945 554 aa5.07□□□□□ -1.6
SPB4YFL002C EST2Q06163 884 aa5.07□□□□□ -1.6
SPB4YFL002C THI73Q07904 523 aa5.07□□□□□ -1.6
SPB4YFL002C HBN1Q96VH4 193 aa5.07□□□□□ -1.6
SPB4YFL002C VPS24P36095 224 aaKnown RBP5.07□□□□□ -1.6
SPB4YFL002C YRB30P53107 440 aaPredicted RBP5.07□□□□□ -1.6
SPB4YFL002C CEF1Q03654 590 aaPredicted RBP5.07□□□□□ -1.6
SPB4YFL002C SLX4Q12098 748 aa5.07□□□□□ -1.6
SPB4YFL002C YPL066WQ12194 479 aa5.07□□□□□ -1.6
SPB4YFL002C MDM12Q92328 271 aa5.07□□□□□ -1.6
SPB4YFL002C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6 RIP-Chip
SPB4YFL002C DBP5P20449 482 aaKnown RBP5.06□□□□□ -1.6
SPB4YFL002C AMN1P38285 549 aaPredicted RBP5.06□□□□□ -1.6
SPB4YFL002C YOR378WQ08902 515 aa5.06□□□□□ -1.6
SPB4YFL002C TMA7Q3E764 64 aaKnown RBP5.06□□□□□ -1.6
SPB4YFL002C RPP1AP05318 106 aaPredicted RBP5.05□□□□□ -1.6
SPB4YFL002C DED1P06634 604 aaKnown RBP5.05□□□□□ -1.6
SPB4YFL002C HTS1P07263 546 aaKnown RBP5.05□□□□□ -1.6
SPB4YFL002C IDI1P15496 288 aa5.05□□□□□ -1.6
SPB4YFL002C CDC11P32458 415 aa5.05□□□□□ -1.6
SPB4YFL002C HBS1P32769 611 aaKnown RBP5.05□□□□□ -1.6
SPB4YFL002C SCT1P32784 759 aa5.05□□□□□ -1.6
SPB4YFL002C ADD66P36040 267 aa5.05□□□□□ -1.6
SPB4YFL002C CCC2P38995 1004 aa5.05□□□□□ -1.6
SPB4YFL002C INP51P40559 946 aaKnown RBP5.05□□□□□ -1.6
SPB4YFL002C CNN1P43618 361 aa5.05□□□□□ -1.6
SPB4YFL002C YJR120WP47157 116 aa5.05□□□□□ -1.6
SPB4YFL002C BIO5P53744 561 aaKnown RBP5.05□□□□□ -1.6
SPB4YFL002C ALO1P54783 526 aaKnown RBP5.05□□□□□ -1.6
SPB4YFL002C UME1Q03010 460 aa5.05□□□□□ -1.6
SPB4YFL002C NUP145P49687 1317 aa5.05□□□□□ -1.6
SPB4YFL002C PTK2P47116 818 aaKnown RBP5.04□□□□□ -1.6
SPB4YFL002C YJR098CP47139 656 aa5.04□□□□□ -1.6
SPB4YFL002C YJR124CP47159 448 aa5.04□□□□□ -1.6
SPB4YFL002C UBP15P50101 1230 aa5.04□□□□□ -1.6
SPB4YFL002C RAT1Q02792 1006 aaKnown RBP5.04□□□□□ -1.6
SPB4YFL002C ECM16Q04217 1267 aaKnown RBP5.04□□□□□ -1.6
SPB4YFL002C AOS1Q06624 347 aa5.04□□□□□ -1.6
SPB4YFL002C YLR001CQ07895 862 aa5.04□□□□□ -1.6
SPB4YFL002C TOP3P13099 656 aa5.04□□□□□ -1.6
SPB4YFL002C MEF1P25039 761 aa5.04□□□□□ -1.6
SPB4YFL002C MRPL16P38064 232 aa5.04□□□□□ -1.6
SPB4YFL002C FUI1P38196 639 aa5.04□□□□□ -1.6
SPB4YFL002C NIT1P40447 199 aa5.04□□□□□ -1.6
SPB4YFL002C GPG1P53130 126 aa5.04□□□□□ -1.6
SPB4YFL002C CAF120P53836 1060 aa5.04□□□□□ -1.6
SPB4YFL002C UTP5Q04177 643 aaKnown RBP5.04□□□□□ -1.6
SPB4YFL002C YDL121CQ07541 149 aa5.04□□□□□ -1.6
SPB4YFL002C ATP4P05626 244 aa5.03□□□□□ -1.6
SPB4YFL002C TOM70P07213 617 aaKnown RBP5.03□□□□□ -1.6
SPB4YFL002C TY1A-LR4P0C2I8 440 aaKnown RBP5.03□□□□□ -1.6
SPB4YFL002C TY1A-DR6P0CX70 440 aa5.03□□□□□ -1.6
SPB4YFL002C TY1A-ER1P0CX71 440 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms