RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	ESC2	Q06340	456 aa		4.78	□□□□□ -1.64
TPA1	YER049W	STB3	Q12427	513 aa		4.78	□□□□□ -1.64
TPA1	YER049W	KCC4	P25389	1037 aa		4.78	□□□□□ -1.64
TPA1	YER049W	ASH1	P34233	588 aa		4.78	□□□□□ -1.64
TPA1	YER049W	AAP1	P37898	856 aa	Known RBP	4.78	□□□□□ -1.64
TPA1	YER049W	SSN3	P39073	555 aa		4.78	□□□□□ -1.64
TPA1	YER049W	STU2	P46675	888 aa		4.78	□□□□□ -1.64
TPA1	YER049W	PEX19	Q07418	342 aa		4.78	□□□□□ -1.64
TPA1	YER049W	RAD4	P14736	754 aa		4.77	□□□□□ -1.65
TPA1	YER049W	SHM1	P37292	490 aa	Predicted RBP	4.77	□□□□□ -1.65
TPA1	YER049W	TPM2	P40414	161 aa		4.77	□□□□□ -1.65
TPA1	YER049W	YJR008W	P47085	338 aa		4.77	□□□□□ -1.65
TPA1	YER049W	SUT1	P53032	299 aa	Known RBP	4.77	□□□□□ -1.65
TPA1	YER049W	YGL081W	P53156	320 aa		4.77	□□□□□ -1.65
TPA1	YER049W	MBR1	P23493	339 aa		4.76	□□□□□ -1.65
TPA1	YER049W	VMA3	P25515	160 aa		4.76	□□□□□ -1.65
TPA1	YER049W	SWC3	P31376	625 aa		4.76	□□□□□ -1.65
TPA1	YER049W	MLF3	P32047	452 aa		4.76	□□□□□ -1.65
TPA1	YER049W	MRPL10	P36520	322 aa		4.76	□□□□□ -1.65
TPA1	YER049W	ECM21	P38167	1117 aa	Known RBP	4.76	□□□□□ -1.65
TPA1	YER049W	PBY1	P38254	753 aa		4.76	□□□□□ -1.65
TPA1	YER049W	CCT5	P40413	562 aa	Known RBP	4.76	□□□□□ -1.65
TPA1	YER049W	UFD2	P54860	961 aa		4.76	□□□□□ -1.65
TPA1	YER049W	HOS3	Q02959	697 aa	Known RBP	4.76	□□□□□ -1.65
TPA1	YER049W	UTP4	Q06679	776 aa	Known RBP	4.76	□□□□□ -1.65
TPA1	YER049W	RIM20	Q12033	661 aa		4.76	□□□□□ -1.65
TPA1	YER049W	Q0182	Q9ZZW1	134 aa		4.76	□□□□□ -1.65
TPA1	YER049W	RPS31	P05759	152 aa	Known RBP	4.76	□□□□□ -1.65
TPA1	YER049W	RPL19A	P0CX82	189 aa	Known RBP	4.76	□□□□□ -1.65
TPA1	YER049W	RPL19B	P0CX83	189 aa	Predicted RBP	4.76	□□□□□ -1.65
TPA1	YER049W	CYC8	P14922	966 aa		4.76	□□□□□ -1.65
TPA1	YER049W	DID4	P36108	232 aa		4.76	□□□□□ -1.65
TPA1	YER049W	JJJ2	P46997	583 aa		4.76	□□□□□ -1.65
TPA1	YER049W	YJR107W	P47145	328 aa		4.76	□□□□□ -1.65
TPA1	YER049W	HST3	P53687	447 aa		4.76	□□□□□ -1.65
TPA1	YER049W	ETT1	Q08421	412 aa	Known RBP	4.76	□□□□□ -1.65
TPA1	YER049W	SLM3	Q12093	417 aa		4.76	□□□□□ -1.65
TPA1	YER049W	ARG82	P07250	355 aa		4.75	□□□□□ -1.65
TPA1	YER049W	TCD1	P38756	429 aa		4.75	□□□□□ -1.65
TPA1	YER049W	MSN5	P52918	1224 aa		4.75	□□□□□ -1.65
TPA1	YER049W	DNM1	P54861	757 aa		4.75	□□□□□ -1.65
TPA1	YER049W	FPR4	Q06205	392 aa	Predicted RBP	4.75	□□□□□ -1.65
TPA1	YER049W	BRE1	Q07457	700 aa	Known RBP	4.75	□□□□□ -1.65
TPA1	YER049W	TY1A-DR3	Q12441	440 aa		4.75	□□□□□ -1.65
TPA1	YER049W	PHO4	P07270	312 aa	Known RBP	4.74	□□□□□ -1.65
TPA1	YER049W	FRS2	P15625	503 aa	Known RBP	4.74	□□□□□ -1.65
TPA1	YER049W	PRX1	P34227	261 aa	Known RBP	4.74	□□□□□ -1.65
TPA1	YER049W	NPR3	P38742	1146 aa		4.74	□□□□□ -1.65
TPA1	YER049W	SPO22	P40511	975 aa		4.74	□□□□□ -1.65
TPA1	YER049W	ALA1	P40825	983 aa	Known RBP	4.74	□□□□□ -1.65
TPA1	YER049W	PTK2	P47116	818 aa	Known RBP	4.74	□□□□□ -1.65
TPA1	YER049W	MRPS35	P53292	345 aa		4.74	□□□□□ -1.65
TPA1	YER049W	NCB2	Q92317	146 aa		4.74	□□□□□ -1.65
TPA1	YER049W	SWI1	P09547	1314 aa		4.74	□□□□□ -1.65
TPA1	YER049W	SEC8	P32855	1065 aa		4.74	□□□□□ -1.65
TPA1	YER049W	QDR2	P40474	542 aa		4.74	□□□□□ -1.65
TPA1	YER049W	HXT8	P40886	569 aa		4.74	□□□□□ -1.65
TPA1	YER049W	CEP3	P40969	608 aa		4.74	□□□□□ -1.65
TPA1	YER049W	OYE2	Q03558	400 aa	Known RBP	4.74	□□□□□ -1.65
TPA1	YER049W	RGA2	Q06407	1009 aa		4.74	□□□□□ -1.65
TPA1	YER049W	INP54	Q08227	384 aa	Known RBP	4.74	□□□□□ -1.65
TPA1	YER049W	YPL150W	Q12152	901 aa		4.74	□□□□□ -1.65
TPA1	YER049W	DDP1	Q99321	188 aa	Known RBP	4.74	□□□□□ -1.65
TPA1	YER049W	PDR18	P53756	1333 aa		4.74	□□□□□ -1.65
TPA1	YER049W	SLA1	P32790	1244 aa		4.73	□□□□□ -1.65
TPA1	YER049W	UBP12	P39538	1254 aa		4.73	□□□□□ -1.65
TPA1	YER049W	YJR115W	P47152	169 aa		4.73	□□□□□ -1.65
TPA1	YER049W	PEX14	P53112	341 aa		4.73	□□□□□ -1.65
TPA1	YER049W	MLC1	P53141	149 aa		4.73	□□□□□ -1.65
TPA1	YER049W	SSL2	Q00578	843 aa		4.73	□□□□□ -1.65
TPA1	YER049W	TIM50	Q02776	476 aa		4.73	□□□□□ -1.65
TPA1	YER049W	PRP5	P21372	849 aa	Predicted RBP	4.72	□□□□□ -1.65
TPA1	YER049W	NUP133	P36161	1157 aa		4.72	□□□□□ -1.65
TPA1	YER049W	KTR3	P38130	404 aa	Predicted RBP	4.72	□□□□□ -1.65
TPA1	YER049W	CIN4	P39110	191 aa		4.72	□□□□□ -1.65
TPA1	YER049W	FYV10	P40492	516 aa		4.72	□□□□□ -1.65
TPA1	YER049W	YGL242C	P53066	181 aa		4.72	□□□□□ -1.65
TPA1	YER049W	ALO1	P54783	526 aa	Known RBP	4.72	□□□□□ -1.65
TPA1	YER049W	ZDS2	P54786	942 aa		4.72	□□□□□ -1.65
TPA1	YER049W	YRF1-3	P0CX14	1859 aa		4.72	□□□□□ -1.65
TPA1	YER049W	YRF1-7	P0CX15	1859 aa		4.72	□□□□□ -1.65
TPA1	YER049W	YRF1-6	P53819	1859 aa		4.72	□□□□□ -1.65
TPA1	YER049W	CPA2	P03965	1118 aa	Known RBP	4.72	□□□□□ -1.65
TPA1	YER049W	TPM1	P17536	199 aa	Known RBP	4.72	□□□□□ -1.65
TPA1	YER049W	LTV1	P34078	463 aa		4.72	□□□□□ -1.65
TPA1	YER049W	MET1	P36150	593 aa		4.72	□□□□□ -1.65
TPA1	YER049W	LDH1	P38139	375 aa		4.72	□□□□□ -1.65
TPA1	YER049W	MGE1	P38523	228 aa		4.72	□□□□□ -1.65
TPA1	YER049W	CTF18	P49956	741 aa		4.72	□□□□□ -1.65
TPA1	YER049W	YGR130C	P53278	816 aa		4.72	□□□□□ -1.65
TPA1	YER049W	CDC55	Q00362	526 aa		4.72	□□□□□ -1.65
TPA1	YER049W	RMD1	Q03441	430 aa		4.72	□□□□□ -1.65
TPA1	YER049W	PSK2	Q08217	1101 aa		4.72	□□□□□ -1.65
TPA1	YER049W	ELG1	Q12050	791 aa		4.72	□□□□□ -1.65
TPA1	YER049W	UTP10	P42945	1769 aa	Known RBP	4.71	□□□□□ -1.65
TPA1	YER049W	LPD1	P09624	499 aa	Known RBP	4.71	□□□□□ -1.66
TPA1	YER049W	MSN1	P22148	382 aa		4.71	□□□□□ -1.66
TPA1	YER049W	IRE1	P32361	1115 aa		4.71	□□□□□ -1.66
TPA1	YER049W	SMC1	P32908	1225 aa		4.71	□□□□□ -1.66
TPA1	YER049W	AHP1	P38013	176 aa	Known RBP	4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms