RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C YGL140CP53120 1219 aa3.67□□□□□ -1.82
PCF11YDR228C ADI1Q03677 179 aa3.67□□□□□ -1.82
PCF11YDR228C SSY1Q03770 852 aa3.67□□□□□ -1.82
PCF11YDR228C TAF7Q05021 590 aa3.67□□□□□ -1.82
PCF11YDR228C RNQ1P25367 405 aa3.67□□□□□ -1.82
PCF11YDR228C XKS1P42826 600 aa3.67□□□□□ -1.82
PCF11YDR228C PEX13P80667 386 aa3.67□□□□□ -1.82
PCF11YDR228C RKM2Q03942 479 aa3.67□□□□□ -1.82
PCF11YDR228C SEC23P15303 768 aaKnown RBP3.66□□□□□ -1.82
PCF11YDR228C IPL1P38991 367 aa3.66□□□□□ -1.82
PCF11YDR228C FAA3P39002 694 aa3.66□□□□□ -1.82
PCF11YDR228C RSM26P47141 266 aa3.66□□□□□ -1.82
PCF11YDR228C RSA3Q05942 220 aaKnown RBP3.66□□□□□ -1.82
PCF11YDR228C YLR257WQ06146 321 aaKnown RBP3.66□□□□□ -1.82
PCF11YDR228C OXR1Q08952 273 aa3.66□□□□□ -1.82
PCF11YDR228C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82 RIP-Chip
PCF11YDR228C UBP5P39944 805 aa3.65□□□□□ -1.82
PCF11YDR228C PIC2P40035 300 aa3.65□□□□□ -1.82
PCF11YDR228C CDA2Q06703 312 aa3.65□□□□□ -1.82
PCF11YDR228C ADD66P36040 267 aa3.64□□□□□ -1.83
PCF11YDR228C TPP1Q03796 238 aa3.64□□□□□ -1.83
PCF11YDR228C PRO1P32264 428 aa3.64□□□□□ -1.83
PCF11YDR228C AFG2P32794 780 aa3.64□□□□□ -1.83
PCF11YDR228C RPT1P33299 467 aaKnown RBP3.64□□□□□ -1.83
PCF11YDR228C SQT1P35184 431 aa3.64□□□□□ -1.83
PCF11YDR228C HSE1P38753 452 aa3.64□□□□□ -1.83
PCF11YDR228C QNS1P38795 714 aaKnown RBP3.64□□□□□ -1.83
PCF11YDR228C PTC7P38797 343 aa3.64□□□□□ -1.83
PCF11YDR228C LAP2Q10740 671 aa3.64□□□□□ -1.83
PCF11YDR228C TAF13P11747 167 aa3.63□□□□□ -1.83
PCF11YDR228C YGR122WP53272 402 aa3.63□□□□□ -1.83
PCF11YDR228C SRO9P25567 434 aaKnown RBP3.62□□□□□ -1.83
PCF11YDR228C MDL2P33311 773 aa3.62□□□□□ -1.83
PCF11YDR228C THI80P35202 319 aa3.62□□□□□ -1.83
PCF11YDR228C THI12P42883 340 aa3.62□□□□□ -1.83
PCF11YDR228C THI5P43534 340 aa3.62□□□□□ -1.83
PCF11YDR228C THI11P47183 340 aa3.62□□□□□ -1.83
PCF11YDR228C THI13Q07748 340 aa3.62□□□□□ -1.83
PCF11YDR228C HRK1Q08732 759 aaKnown RBP3.62□□□□□ -1.83
PCF11YDR228C GAS1P22146 559 aaKnown RBP3.62□□□□□ -1.83
PCF11YDR228C YHL012WP38709 493 aa3.62□□□□□ -1.83
PCF11YDR228C NMD3P38861 518 aaKnown RBP3.62□□□□□ -1.83
PCF11YDR228C GTS1P40956 396 aa3.62□□□□□ -1.83
PCF11YDR228C VPS53P47061 822 aa3.62□□□□□ -1.83
PCF11YDR228C PRP43P53131 767 aaKnown RBP3.62□□□□□ -1.83
PCF11YDR228C EST2Q06163 884 aa3.62□□□□□ -1.83
PCF11YDR228C YDL177CQ12257 170 aa3.62□□□□□ -1.83
PCF11YDR228C PRE9P23638 258 aaKnown RBP3.61□□□□□ -1.83
PCF11YDR228C BAP2P38084 609 aa3.61□□□□□ -1.83
PCF11YDR228C YJL045WP47052 634 aa3.61□□□□□ -1.83
PCF11YDR228C MCD1Q12158 566 aa3.61□□□□□ -1.83
PCF11YDR228C YSC84P32793 468 aa3.6□□□□□ -1.83
PCF11YDR228C ENT3P47160 408 aa3.6□□□□□ -1.83
PCF11YDR228C GNP1P48813 663 aa3.6□□□□□ -1.83
PCF11YDR228C YNR063WP53749 607 aa3.6□□□□□ -1.83
PCF11YDR228C RRP15Q06511 250 aaPredicted RBP3.6□□□□□ -1.83
PCF11YDR228C CYC8P14922 966 aa3.6□□□□□ -1.83
PCF11YDR228C PRP6P19735 899 aaPredicted RBP3.6□□□□□ -1.83
PCF11YDR228C HXT13P39924 564 aa3.6□□□□□ -1.83
PCF11YDR228C HXT17P53631 564 aa3.6□□□□□ -1.83
PCF11YDR228C HXT15P54854 567 aa3.6□□□□□ -1.83
PCF11YDR228C HDA2Q06629 674 aa3.6□□□□□ -1.83
PCF11YDR228C NOP8Q08287 484 aaPredicted RBP3.6□□□□□ -1.83
PCF11YDR228C RAD2P07276 1031 aa3.59□□□□□ -1.83
PCF11YDR228C SLD2P34252 453 aa3.59□□□□□ -1.83
PCF11YDR228C ATG14P38270 344 aa3.59□□□□□ -1.83
PCF11YDR228C MRPS18P42847 217 aa3.59□□□□□ -1.83
PCF11YDR228C YJR107WP47145 328 aa3.59□□□□□ -1.83
PCF11YDR228C RSC58Q07979 502 aa3.59□□□□□ -1.83
PCF11YDR228C ATE1P16639 503 aa3.58□□□□□ -1.84
PCF11YDR228C KIP1P28742 1111 aa3.58□□□□□ -1.84
PCF11YDR228C MRPL22P53881 309 aa3.58□□□□□ -1.84
PCF11YDR228C SIW14P53965 281 aa3.58□□□□□ -1.84
PCF11YDR228C RCL1Q08096 367 aaPredicted RBP3.58□□□□□ -1.84
PCF11YDR228C ALG3P38179 458 aa3.58□□□□□ -1.84
PCF11YDR228C SNF5P18480 905 aa3.57□□□□□ -1.84
PCF11YDR228C YCR015CP25616 317 aa3.57□□□□□ -1.84
PCF11YDR228C MKK2P32491 506 aa3.57□□□□□ -1.84
PCF11YDR228C RPN3P40016 523 aaKnown RBP3.57□□□□□ -1.84
PCF11YDR228C PTC5Q12511 572 aa3.57□□□□□ -1.84
PCF11YDR228C ETP1P38748 585 aaKnown RBP3.56□□□□□ -1.84
PCF11YDR228C RPS26AP39938 119 aaKnown RBP3.56□□□□□ -1.84
PCF11YDR228C RPS26BP39939 119 aaKnown RBP3.56□□□□□ -1.84
PCF11YDR228C ENV11P53246 860 aa3.56□□□□□ -1.84
PCF11YDR228C HOS3Q02959 697 aaKnown RBP3.56□□□□□ -1.84
PCF11YDR228C ESC8Q08119 714 aa3.56□□□□□ -1.84
PCF11YDR228C YPL260WQ08977 551 aa3.56□□□□□ -1.84
PCF11YDR228C SOD2P00447 233 aa3.56□□□□□ -1.84
PCF11YDR228C SEC8P32855 1065 aa3.56□□□□□ -1.84
PCF11YDR228C TAF1P46677 1066 aa3.56□□□□□ -1.84
PCF11YDR228C POL32P47110 350 aa3.56□□□□□ -1.84
PCF11YDR228C RIM8P53179 542 aa3.56□□□□□ -1.84
PCF11YDR228C RAT1Q02792 1006 aaKnown RBP3.56□□□□□ -1.84
PCF11YDR228C ROD1Q02805 837 aa3.56□□□□□ -1.84
PCF11YDR228C YML020WQ03722 664 aa3.56□□□□□ -1.84
PCF11YDR228C GCR1P07261 785 aa3.55□□□□□ -1.84
PCF11YDR228C AIM26P32858 118 aa3.55□□□□□ -1.84
PCF11YDR228C ABZ1P37254 787 aaPredicted RBP3.55□□□□□ -1.84
PCF11YDR228C AIM3P38266 947 aaKnown RBP3.55□□□□□ -1.84
PCF11YDR228C MGE1P38523 228 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 72.4 ms