RNA–Protein interactions for RNA: YDR207C

UME6, Transcript of Rpd3L histone deacetylase complex subunit, yeast

Gene UME6, Length 2,511 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UME6	YDR207C	PAP1	P29468	568 aa	Known RBP	11.62	□□□□□ -0.55
UME6	YDR207C	PTC4	P38089	393 aa		11.62	□□□□□ -0.55
UME6	YDR207C	CAJ1	P39101	391 aa		11.62	□□□□□ -0.55
UME6	YDR207C	YGR266W	P53326	701 aa		11.62	□□□□□ -0.55
UME6	YDR207C	MEH1	Q02205	184 aa		11.62	□□□□□ -0.55
UME6	YDR207C	YPL109C	Q02981	657 aa		11.62	□□□□□ -0.55
UME6	YDR207C	MUB1	Q03162	620 aa		11.62	□□□□□ -0.55
UME6	YDR207C	YCG1	Q06680	1035 aa		11.62	□□□□□ -0.55
UME6	YDR207C	GPR1	Q12361	961 aa		11.62	□□□□□ -0.55
UME6	YDR207C	JJJ2	P46997	583 aa		11.62	□□□□□ -0.55
UME6	YDR207C	STR2	P47164	639 aa		11.62	□□□□□ -0.55
UME6	YDR207C	ADA2	Q02336	434 aa		11.62	□□□□□ -0.55
UME6	YDR207C	YLH47	Q06493	454 aa		11.62	□□□□□ -0.55
UME6	YDR207C	YRF1-4	O13559	1382 aa		11.62	□□□□□ -0.55
UME6	YDR207C	ACP1	P32463	125 aa		11.61	□□□□□ -0.55
UME6	YDR207C	YEL023C	P39992	682 aa		11.61	□□□□□ -0.55
UME6	YDR207C	RKM4	Q12504	494 aa		11.61	□□□□□ -0.55
UME6	YDR207C	VAN1	P23642	535 aa		11.61	□□□□□ -0.55
UME6	YDR207C	BOI1	P38041	980 aa	Known RBP	11.61	□□□□□ -0.55
UME6	YDR207C	ARB1	P40024	610 aa	Known RBP	11.61	□□□□□ -0.55
UME6	YDR207C	SCS2	P40075	244 aa	Known RBP	11.61	□□□□□ -0.55
UME6	YDR207C	IMD4	P50094	524 aa	Known RBP	11.61	□□□□□ -0.55
UME6	YDR207C	LSC1	P53598	329 aa	Known RBP	11.61	□□□□□ -0.55
UME6	YDR207C	COG6	P53959	839 aa		11.61	□□□□□ -0.55
UME6	YDR207C	OCA6	Q12454	224 aa		11.61	□□□□□ -0.55
UME6	YDR207C	PRX1	P34227	261 aa	Known RBP	11.6	□□□□□ -0.55
UME6	YDR207C	SGM1	P47166	707 aa		11.6	□□□□□ -0.55
UME6	YDR207C	PCL10	P53124	433 aa		11.6	□□□□□ -0.55
UME6	YDR207C	SPO71	Q03868	1245 aa		11.6	□□□□□ -0.55
UME6	YDR207C	SGT2	Q12118	346 aa	Known RBP	11.6	□□□□□ -0.55
UME6	YDR207C	BNR1	P40450	1375 aa		11.6	□□□□□ -0.55
UME6	YDR207C	SSC1	P0CS90	654 aa	Known RBP	11.6	□□□□□ -0.55
UME6	YDR207C	PRD1	P25375	712 aa		11.6	□□□□□ -0.55
UME6	YDR207C	ARC19	P33204	171 aa	Known RBP	11.6	□□□□□ -0.55
UME6	YDR207C	HCS1	P34243	683 aa		11.6	□□□□□ -0.55
UME6	YDR207C	REV7	P38927	245 aa		11.6	□□□□□ -0.55
UME6	YDR207C	ERP6	P53198	216 aa		11.6	□□□□□ -0.55
UME6	YDR207C	TRS120	Q04183	1289 aa		11.6	□□□□□ -0.55
UME6	YDR207C	BUD21	Q08492	214 aa	Predicted RBP	11.6	□□□□□ -0.55
UME6	YDR207C	GPA1	P08539	472 aa		11.59	□□□□□ -0.55
UME6	YDR207C	RSR1	P13856	272 aa		11.59	□□□□□ -0.55
UME6	YDR207C	APD1	P38281	316 aa		11.59	□□□□□ -0.55
UME6	YDR207C	RLP7	P40693	322 aa	Known RBP	11.59	□□□□□ -0.55
UME6	YDR207C	SYF1	Q04048	859 aa	Predicted RBP	11.59	□□□□□ -0.55
UME6	YDR207C	ARR2	Q06597	130 aa		11.59	□□□□□ -0.55
UME6	YDR207C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.59	□□□□□ -0.55	not detected
UME6	YDR207C	BBC1	P47068	1157 aa		11.59	□□□□□ -0.55
UME6	YDR207C	FAR11	P53917	953 aa		11.59	□□□□□ -0.55
UME6	YDR207C	YPQ2	Q06328	317 aa		11.59	□□□□□ -0.55
UME6	YDR207C	BDF2	Q07442	638 aa		11.59	□□□□□ -0.55
UME6	YDR207C	RTT109	Q07794	436 aa		11.59	□□□□□ -0.55
UME6	YDR207C	YMR085W	P0CF18	432 aa		11.58	□□□□□ -0.56
UME6	YDR207C	RPL19A	P0CX82	189 aa	Known RBP	11.58	□□□□□ -0.56
UME6	YDR207C	RPL19B	P0CX83	189 aa	Predicted RBP	11.58	□□□□□ -0.56
UME6	YDR207C	STO1	P34160	861 aa	Known RBP	11.58	□□□□□ -0.56
UME6	YDR207C	RRM3	P38766	723 aa		11.58	□□□□□ -0.56
UME6	YDR207C	MON1	P53129	644 aa		11.58	□□□□□ -0.56
UME6	YDR207C	ATG13	Q06628	738 aa		11.58	□□□□□ -0.56
UME6	YDR207C	FZO1	P38297	855 aa		11.58	□□□□□ -0.56
UME6	YDR207C	UBP12	P39538	1254 aa		11.58	□□□□□ -0.56
UME6	YDR207C	SXM1	Q04175	944 aa	Known RBP	11.58	□□□□□ -0.56
UME6	YDR207C	DDP1	Q99321	188 aa	Known RBP	11.58	□□□□□ -0.56
UME6	YDR207C	CMP2	P14747	604 aa		11.57	□□□□□ -0.56
UME6	YDR207C	SEN2	P16658	377 aa		11.57	□□□□□ -0.56
UME6	YDR207C	YBR242W	P38331	238 aa		11.57	□□□□□ -0.56
UME6	YDR207C	YER130C	P39959	443 aa		11.57	□□□□□ -0.56
UME6	YDR207C	MDJ2	P42834	146 aa		11.57	□□□□□ -0.56
UME6	YDR207C	HMI1	Q12039	706 aa		11.57	□□□□□ -0.56
UME6	YDR207C	IES3	Q12345	250 aa		11.57	□□□□□ -0.56
UME6	YDR207C	SEC21	P32074	935 aa	Known RBP	11.57	□□□□□ -0.56
UME6	YDR207C	YEL043W	P32618	956 aa		11.57	□□□□□ -0.56
UME6	YDR207C	PEX5	P35056	612 aa		11.57	□□□□□ -0.56
UME6	YDR207C	NMD3	P38861	518 aa	Known RBP	11.57	□□□□□ -0.56
UME6	YDR207C	GCD10	P41814	478 aa		11.57	□□□□□ -0.56
UME6	YDR207C	TEL2	P53038	688 aa		11.57	□□□□□ -0.56
UME6	YDR207C	PCL8	Q08966	492 aa		11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-H	O13535	1793 aa		11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-DR5	P0C2I2	1755 aa		11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-DR6	P0C2I3	1755 aa		11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-LR2	P0C2I5	1755 aa		11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-PR2	P0C2J0	1756 aa		11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-JR1	P47098	1755 aa		11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-ML2	Q03434	1755 aa	Known RBP	11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-ER1	Q03612	1755 aa		11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-ML1	Q04711	1755 aa	Known RBP	11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-GR2	Q12269	1755 aa		11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-OL	Q12273	1755 aa		11.57	□□□□□ -0.56
UME6	YDR207C	TY1B-PL	Q12414	1755 aa	Known RBP	11.57	□□□□□ -0.56
UME6	YDR207C	SBP1	P10080	294 aa	Known RBP	11.56	□□□□□ -0.56
UME6	YDR207C	SSP1	P38871	571 aa		11.56	□□□□□ -0.56
UME6	YDR207C	KAP123	P40069	1113 aa	Known RBP	11.56	□□□□□ -0.56
UME6	YDR207C	PEX14	P53112	341 aa		11.56	□□□□□ -0.56
UME6	YDR207C	MCP2	Q06567	569 aa		11.56	□□□□□ -0.56
UME6	YDR207C	SIR4	P11978	1358 aa		11.56	□□□□□ -0.56
UME6	YDR207C	NOC2	P39744	710 aa	Known RBP	11.56	□□□□□ -0.56
UME6	YDR207C	CKB1	P43639	278 aa		11.56	□□□□□ -0.56
UME6	YDR207C	YNL144C	P53907	740 aa		11.56	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms