RNA–Protein interactions for RNA: YDR200C

VPS64, Transcript of Protein required for cytoplasm to vacuole targeting of proteins, yeastyeast

Gene VPS64, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS64YDR200C ACF4P47129 309 aa3.7□□□□□ -1.82
VPS64YDR200C TOM1Q03280 3268 aa3.7□□□□□ -1.82
VPS64YDR200C NAB2P32505 525 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82 RIP-Chip
VPS64YDR200C MSC7P38694 644 aa3.7□□□□□ -1.82
VPS64YDR200C RAD55P38953 406 aa3.7□□□□□ -1.82
VPS64YDR200C YNR040WP53736 256 aa3.7□□□□□ -1.82
VPS64YDR200C HEH2Q03281 663 aa3.7□□□□□ -1.82
VPS64YDR200C KTR2P33550 425 aa3.69□□□□□ -1.82
VPS64YDR200C MDJ2P42834 146 aa3.69□□□□□ -1.82
VPS64YDR200C ITC1P53125 1264 aa3.69□□□□□ -1.82
VPS64YDR200C ALD3P54114 506 aa3.69□□□□□ -1.82
VPS64YDR200C UFD2P54860 961 aa3.69□□□□□ -1.82
VPS64YDR200C YML020WQ03722 664 aa3.69□□□□□ -1.82
VPS64YDR200C PRY1P47032 299 aa3.68□□□□□ -1.82
VPS64YDR200C YHL050CP38721 697 aa3.67□□□□□ -1.82
VPS64YDR200C AIM46P38885 310 aa3.67□□□□□ -1.82
VPS64YDR200C YHR219WP38900 624 aa3.67□□□□□ -1.82
VPS64YDR200C STM1P39015 273 aaKnown RBP3.67□□□□□ -1.82
VPS64YDR200C RGD2P43556 714 aa3.67□□□□□ -1.82
VPS64YDR200C YPL034WQ03083 165 aa3.67□□□□□ -1.82
VPS64YDR200C TRS120Q04183 1289 aa3.67□□□□□ -1.82
VPS64YDR200C RAD4P14736 754 aa3.67□□□□□ -1.82
VPS64YDR200C GRX4P32642 244 aa3.67□□□□□ -1.82
VPS64YDR200C SLD2P34252 453 aa3.67□□□□□ -1.82
VPS64YDR200C ALG14P38242 237 aa3.67□□□□□ -1.82
VPS64YDR200C NTA1P40354 457 aa3.67□□□□□ -1.82
VPS64YDR200C UTP22P53254 1237 aaPredicted RBP3.67□□□□□ -1.82
VPS64YDR200C ADE16P54113 591 aaKnown RBP3.67□□□□□ -1.82
VPS64YDR200C TIF6Q12522 245 aaKnown RBP3.67□□□□□ -1.82
VPS64YDR200C RPO41P13433 1351 aaKnown RBP3.67□□□□□ -1.82
VPS64YDR200C SEC3P33332 1336 aaKnown RBP3.66□□□□□ -1.82
VPS64YDR200C IDI1P15496 288 aa3.66□□□□□ -1.82
VPS64YDR200C IRS4P36115 615 aaKnown RBP3.66□□□□□ -1.82
VPS64YDR200C PSY2P40164 858 aa3.66□□□□□ -1.82
VPS64YDR200C YIL165CP40446 119 aa3.66□□□□□ -1.82
VPS64YDR200C INP52P50942 1183 aa3.66□□□□□ -1.82
VPS64YDR200C ALO1P54783 526 aaKnown RBP3.66□□□□□ -1.82
VPS64YDR200C TAP42Q04372 366 aa3.66□□□□□ -1.82
VPS64YDR200C NUT2Q06213 157 aa3.66□□□□□ -1.82
VPS64YDR200C BUG1Q12191 341 aa3.66□□□□□ -1.82
VPS64YDR200C NHA1Q99271 985 aa3.66□□□□□ -1.82
VPS64YDR200C PGM2P37012 569 aaKnown RBP3.65□□□□□ -1.82
VPS64YDR200C YER156CP40093 338 aaKnown RBP3.65□□□□□ -1.82
VPS64YDR200C PRK1P40494 810 aa3.65□□□□□ -1.82
VPS64YDR200C PPT1P53043 513 aa3.65□□□□□ -1.82
VPS64YDR200C EMG1Q06287 252 aaKnown RBP3.65□□□□□ -1.82
VPS64YDR200C RSC2Q06488 889 aa3.65□□□□□ -1.82
VPS64YDR200C ATG13Q06628 738 aa3.65□□□□□ -1.82
VPS64YDR200C FRT1Q99332 602 aa3.65□□□□□ -1.82
VPS64YDR200C AUS1Q08409 1394 aa3.65□□□□□ -1.83
VPS64YDR200C GRX1P25373 110 aaKnown RBP3.65□□□□□ -1.83
VPS64YDR200C OMA1P36163 345 aa3.65□□□□□ -1.83
VPS64YDR200C SAP155P43612 1002 aa3.65□□□□□ -1.83
VPS64YDR200C TOS1P38288 455 aa3.64□□□□□ -1.83
VPS64YDR200C YNL011CP53980 444 aa3.64□□□□□ -1.83
VPS64YDR200C SEC20P28791 383 aa3.63□□□□□ -1.83
VPS64YDR200C MSC6Q08818 692 aaKnown RBP3.63□□□□□ -1.83
VPS64YDR200C UTP10P42945 1769 aaKnown RBP3.63□□□□□ -1.83
VPS64YDR200C MHP1P43638 1398 aa3.63□□□□□ -1.83
VPS64YDR200C ECM2P38241 364 aaKnown RBP3.63□□□□□ -1.83
VPS64YDR200C PPX1P38698 397 aa3.63□□□□□ -1.83
VPS64YDR200C CDC55Q00362 526 aa3.63□□□□□ -1.83
VPS64YDR200C BSC2Q05611 235 aa3.63□□□□□ -1.83
VPS64YDR200C INP54Q08227 384 aaKnown RBP3.63□□□□□ -1.83
VPS64YDR200C NOP8Q08287 484 aaPredicted RBP3.63□□□□□ -1.83
VPS64YDR200C MRP10O75012 95 aa3.62□□□□□ -1.83
VPS64YDR200C CTT1P06115 562 aa3.62□□□□□ -1.83
VPS64YDR200C OSM1P21375 501 aaKnown RBP3.62□□□□□ -1.83
VPS64YDR200C NAR1P23503 491 aaKnown RBP3.62□□□□□ -1.83
VPS64YDR200C YKL222CP35995 705 aa3.62□□□□□ -1.83
VPS64YDR200C EAF6P47128 113 aa3.62□□□□□ -1.83
VPS64YDR200C BUD9P53226 547 aa3.62□□□□□ -1.83
VPS64YDR200C CTF4Q01454 927 aa3.62□□□□□ -1.83
VPS64YDR200C RSC4Q02206 625 aa3.62□□□□□ -1.83
VPS64YDR200C SEN54Q02825 467 aaPredicted RBP3.62□□□□□ -1.83
VPS64YDR200C MNL2Q12205 849 aa3.62□□□□□ -1.83
VPS64YDR200C YHL008CP38750 627 aa3.61□□□□□ -1.83
VPS64YDR200C RRT14P40470 206 aa3.61□□□□□ -1.83
VPS64YDR200C ORC1P54784 914 aaPredicted RBP3.61□□□□□ -1.83
VPS64YDR200C GPI13Q07830 1017 aa3.61□□□□□ -1.83
VPS64YDR200C FUS1P11710 512 aa3.6□□□□□ -1.83
VPS64YDR200C PYC2P32327 1180 aaKnown RBP3.6□□□□□ -1.83
VPS64YDR200C ERT1P38140 529 aa3.6□□□□□ -1.83
VPS64YDR200C INP51P40559 946 aaKnown RBP3.6□□□□□ -1.83
VPS64YDR200C YBP2P53169 641 aa3.6□□□□□ -1.83
VPS64YDR200C GIS4Q04233 774 aa3.6□□□□□ -1.83
VPS64YDR200C NOC3Q07896 663 aaPredicted RBP3.6□□□□□ -1.83
VPS64YDR200C WHI5Q12416 295 aa3.6□□□□□ -1.83
VPS64YDR200C RRM3P38766 723 aa3.6□□□□□ -1.83
VPS64YDR200C SAM37P50110 327 aa3.6□□□□□ -1.83
VPS64YDR200C RPS9BP05755 195 aaKnown RBP3.59□□□□□ -1.83
VPS64YDR200C KAR2P16474 682 aaKnown RBP3.59□□□□□ -1.83
VPS64YDR200C CIC1P38779 376 aaKnown RBP3.59□□□□□ -1.83
VPS64YDR200C SOK2P53438 785 aaPredicted RBP3.59□□□□□ -1.83
VPS64YDR200C MDG1P53885 366 aa3.59□□□□□ -1.83
VPS64YDR200C HIM1Q06674 414 aa3.59□□□□□ -1.83
VPS64YDR200C GAS5Q08193 484 aa3.59□□□□□ -1.83
VPS64YDR200C NUP145P49687 1317 aa3.59□□□□□ -1.83
VPS64YDR200C GCD6P32501 712 aaKnown RBP3.58□□□□□ -1.84
VPS64YDR200C AVT1P47082 602 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms