RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W PIN2Q12057 282 aa5.8□□□□□ -1.48
HSP42YDR171W CHD1P32657 1468 aa5.79□□□□□ -1.48
HSP42YDR171W CDC34P14682 295 aa5.79□□□□□ -1.48
HSP42YDR171W NAP1P25293 417 aaKnown RBP5.79□□□□□ -1.48
HSP42YDR171W ADD66P36040 267 aa5.79□□□□□ -1.48
HSP42YDR171W YAR028WP39548 234 aa5.79□□□□□ -1.48
HSP42YDR171W HXT13P39924 564 aa5.79□□□□□ -1.48
HSP42YDR171W HXT17P53631 564 aa5.79□□□□□ -1.48
HSP42YDR171W CWC24P53769 259 aa5.79□□□□□ -1.48
HSP42YDR171W SIW14P53965 281 aa5.79□□□□□ -1.48
HSP42YDR171W ALD6P54115 500 aaKnown RBP5.79□□□□□ -1.48
HSP42YDR171W HXT15P54854 567 aa5.79□□□□□ -1.48
HSP42YDR171W RTT10Q08924 1013 aa5.79□□□□□ -1.48
HSP42YDR171W TAF13P11747 167 aa5.78□□□□□ -1.48
HSP42YDR171W NAM7P30771 971 aaKnown RBP5.78□□□□□ -1.48
HSP42YDR171W VAC8P39968 578 aa5.78□□□□□ -1.48
HSP42YDR171W FAA4P47912 694 aaKnown RBP5.78□□□□□ -1.48
HSP42YDR171W GDE1Q02979 1223 aa5.78□□□□□ -1.48
HSP42YDR171W RAD27P26793 382 aa5.77□□□□□ -1.49
HSP42YDR171W NOP2P40991 618 aaKnown RBP5.77□□□□□ -1.49
HSP42YDR171W RAT1Q02792 1006 aaKnown RBP5.77□□□□□ -1.49
HSP42YDR171W MKK2P32491 506 aa5.76□□□□□ -1.49
HSP42YDR171W NMD3P38861 518 aaKnown RBP5.76□□□□□ -1.49
HSP42YDR171W MSH4P40965 878 aaPredicted RBP5.76□□□□□ -1.49
HSP42YDR171W AFG2P32794 780 aa5.75□□□□□ -1.49
HSP42YDR171W RER2P35196 286 aa5.75□□□□□ -1.49
HSP42YDR171W EEB1Q02891 456 aa5.75□□□□□ -1.49
HSP42YDR171W GIC2Q06648 383 aa5.75□□□□□ -1.49
HSP42YDR171W LAP2Q10740 671 aa5.75□□□□□ -1.49
HSP42YDR171W NFS1P25374 497 aa5.74□□□□□ -1.49
HSP42YDR171W YPL034WQ03083 165 aa5.74□□□□□ -1.49
HSP42YDR171W RKM2Q03942 479 aa5.74□□□□□ -1.49
HSP42YDR171W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
HSP42YDR171W TMA46Q12000 345 aaKnown RBP5.74□□□□□ -1.49
HSP42YDR171W PRI2P20457 528 aa5.73□□□□□ -1.49
HSP42YDR171W COQ2P32378 372 aa5.73□□□□□ -1.49
HSP42YDR171W SMY2P32909 740 aaKnown RBP5.73□□□□□ -1.49
HSP42YDR171W ALG3P38179 458 aa5.73□□□□□ -1.49
HSP42YDR171W HSE1P38753 452 aa5.73□□□□□ -1.49
HSP42YDR171W CCT8P47079 568 aaKnown RBP5.73□□□□□ -1.49
HSP42YDR171W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
HSP42YDR171W RSA3Q05942 220 aaKnown RBP5.73□□□□□ -1.49
HSP42YDR171W YLR257WQ06146 321 aaKnown RBP5.73□□□□□ -1.49
HSP42YDR171W PTC5Q12511 572 aa5.73□□□□□ -1.49
HSP42YDR171W MMS22Q06164 1454 aa5.72□□□□□ -1.49
HSP42YDR171W TRP2P00899 507 aaKnown RBP5.72□□□□□ -1.49
HSP42YDR171W RPS4AP0CX35 261 aaKnown RBP5.72□□□□□ -1.49
HSP42YDR171W RPS4BP0CX36 261 aaKnown RBP5.72□□□□□ -1.49
HSP42YDR171W RET1P22276 1149 aaKnown RBP5.72□□□□□ -1.49
HSP42YDR171W SYP1P25623 870 aaKnown RBP5.72□□□□□ -1.49
HSP42YDR171W PGM1P33401 570 aaKnown RBP5.72□□□□□ -1.49
HSP42YDR171W WHI3P34761 661 aaKnown RBP5.72□□□□□ -1.49
HSP42YDR171W NNK1P36003 928 aa5.72□□□□□ -1.49
HSP42YDR171W SAF1P38352 637 aa5.72□□□□□ -1.49
HSP42YDR171W YGR053CP53234 283 aa5.72□□□□□ -1.49
HSP42YDR171W EAR1Q03212 550 aa5.72□□□□□ -1.49
HSP42YDR171W TY1B-DR4Q07793 1604 aa5.72□□□□□ -1.49
HSP42YDR171W MOT2P34909 587 aaKnown RBP5.71□□□□□ -1.5
HSP42YDR171W QNS1P38795 714 aaKnown RBP5.71□□□□□ -1.5
HSP42YDR171W LSB3P43603 459 aaKnown RBP5.71□□□□□ -1.5
HSP42YDR171W ENT3P47160 408 aa5.71□□□□□ -1.5
HSP42YDR171W TYW3P53177 273 aa5.71□□□□□ -1.5
HSP42YDR171W AOS1Q06624 347 aa5.71□□□□□ -1.5
HSP42YDR171W FAL1Q12099 399 aaKnown RBP5.71□□□□□ -1.5
HSP42YDR171W GPB2P39717 880 aa5.7□□□□□ -1.5
HSP42YDR171W MMM1P41800 426 aa5.7□□□□□ -1.5
HSP42YDR171W VPS53P47061 822 aa5.7□□□□□ -1.5
HSP42YDR171W ALT1P52893 592 aa5.7□□□□□ -1.5
HSP42YDR171W TPP1Q03796 238 aa5.7□□□□□ -1.5
HSP42YDR171W ESC2Q06340 456 aa5.7□□□□□ -1.5
HSP42YDR171W YLR122CQ12312 125 aa5.7□□□□□ -1.5
HSP42YDR171W XRN1P22147 1528 aaKnown RBP5.69□□□□□ -1.5
HSP42YDR171W CHS2P14180 963 aa5.69□□□□□ -1.5
HSP42YDR171W BAS1P22035 811 aa5.69□□□□□ -1.5
HSP42YDR171W LYP1P32487 611 aa5.69□□□□□ -1.5
HSP42YDR171W MCM7P38132 845 aa5.69□□□□□ -1.5
HSP42YDR171W CNN1P43618 361 aa5.69□□□□□ -1.5
HSP42YDR171W TIF35Q04067 274 aaKnown RBP5.69□□□□□ -1.5
HSP42YDR171W INO1P11986 533 aa5.68□□□□□ -1.5
HSP42YDR171W DBP5P20449 482 aaKnown RBP5.68□□□□□ -1.5
HSP42YDR171W PUF4P25339 888 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
HSP42YDR171W KIP1P28742 1111 aa5.68□□□□□ -1.5
HSP42YDR171W MLS1P30952 554 aa5.68□□□□□ -1.5
HSP42YDR171W ABD1P32783 436 aaPredicted RBP5.68□□□□□ -1.5
HSP42YDR171W YKL069WP36088 180 aa5.68□□□□□ -1.5
HSP42YDR171W YJL045WP47052 634 aa5.68□□□□□ -1.5
HSP42YDR171W YLR225CQ05948 407 aaKnown RBP5.68□□□□□ -1.5
HSP42YDR171W OPI10Q08202 246 aa5.68□□□□□ -1.5
HSP42YDR171W PUS7Q08647 676 aaKnown RBP5.68□□□□□ -1.5
HSP42YDR171W KAE1P36132 386 aa5.67□□□□□ -1.5
HSP42YDR171W CIT3P43635 486 aa5.67□□□□□ -1.5
HSP42YDR171W YGR130CP53278 816 aa5.67□□□□□ -1.5
HSP42YDR171W SPO20Q04359 397 aa5.67□□□□□ -1.5
HSP42YDR171W HRK1Q08732 759 aaKnown RBP5.67□□□□□ -1.5
HSP42YDR171W WRS1Q12109 432 aaKnown RBP5.67□□□□□ -1.5
HSP42YDR171W SSF2Q12153 453 aaPredicted RBP5.67□□□□□ -1.5
HSP42YDR171W HSL1P34244 1518 aa5.67□□□□□ -1.5
HSP42YDR171W MPH1P40562 993 aa5.66□□□□□ -1.5
HSP42YDR171W MTC5Q03897 1148 aa5.66□□□□□ -1.5
HSP42YDR171W SPO21Q12411 609 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 51 ms