RNA–Protein interactions for RNA: YDR045C

RPC11, Transcript of RNA polymerase III subunit C11, yeast

Gene RPC11, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC11	YDR045C	HXT13	P39924	564 aa		4.93	□□□□□ -1.62
RPC11	YDR045C	YGL176C	P46945	554 aa		4.93	□□□□□ -1.62
RPC11	YDR045C	PTK2	P47116	818 aa	Known RBP	4.93	□□□□□ -1.62
RPC11	YDR045C	ENT3	P47160	408 aa		4.93	□□□□□ -1.62
RPC11	YDR045C	PMT3	P47190	753 aa		4.93	□□□□□ -1.62
RPC11	YDR045C	UTP8	P53276	713 aa	Known RBP	4.93	□□□□□ -1.62
RPC11	YDR045C	HXT17	P53631	564 aa		4.93	□□□□□ -1.62
RPC11	YDR045C	ALO1	P54783	526 aa	Known RBP	4.93	□□□□□ -1.62
RPC11	YDR045C	HXT15	P54854	567 aa		4.93	□□□□□ -1.62
RPC11	YDR045C	UGO1	Q03327	502 aa		4.93	□□□□□ -1.62
RPC11	YDR045C	REC8	Q12188	680 aa		4.93	□□□□□ -1.62
RPC11	YDR045C	RKM4	Q12504	494 aa		4.93	□□□□□ -1.62
RPC11	YDR045C	KAR1	P11927	433 aa		4.92	□□□□□ -1.62
RPC11	YDR045C	AFT1	P22149	690 aa		4.92	□□□□□ -1.62
RPC11	YDR045C	SYP1	P25623	870 aa	Known RBP	4.92	□□□□□ -1.62
RPC11	YDR045C	MKK2	P32491	506 aa		4.92	□□□□□ -1.62
RPC11	YDR045C	PEX6	P33760	1030 aa		4.92	□□□□□ -1.62
RPC11	YDR045C	BET3	P36149	193 aa		4.92	□□□□□ -1.62
RPC11	YDR045C	PMC1	P38929	1173 aa	Predicted RBP	4.92	□□□□□ -1.62
RPC11	YDR045C	MBP1	P39678	833 aa		4.92	□□□□□ -1.62
RPC11	YDR045C	VTC4	P47075	721 aa		4.92	□□□□□ -1.62
RPC11	YDR045C	UBP15	P50101	1230 aa		4.92	□□□□□ -1.62
RPC11	YDR045C	LSC2	P53312	427 aa		4.92	□□□□□ -1.62
RPC11	YDR045C	YNR040W	P53736	256 aa		4.92	□□□□□ -1.62
RPC11	YDR045C	TIF35	Q04067	274 aa	Known RBP	4.92	□□□□□ -1.62
RPC11	YDR045C	EST2	Q06163	884 aa		4.92	□□□□□ -1.62
RPC11	YDR045C	AOS1	Q06624	347 aa		4.92	□□□□□ -1.62
RPC11	YDR045C	GSY1	P23337	708 aa		4.91	□□□□□ -1.62
RPC11	YDR045C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
RPC11	YDR045C	MRPL16	P38064	232 aa		4.91	□□□□□ -1.62
RPC11	YDR045C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
RPC11	YDR045C	YER156C	P40093	338 aa	Known RBP	4.91	□□□□□ -1.62
RPC11	YDR045C	NIT1	P40447	199 aa		4.91	□□□□□ -1.62
RPC11	YDR045C	FET4	P40988	552 aa		4.91	□□□□□ -1.62
RPC11	YDR045C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
RPC11	YDR045C	SDA1	P53313	767 aa	Known RBP	4.91	□□□□□ -1.62
RPC11	YDR045C	FAP7	Q12055	197 aa	Predicted RBP	4.91	□□□□□ -1.62
RPC11	YDR045C	TMA17	Q12513	150 aa		4.91	□□□□□ -1.62
RPC11	YDR045C	CDC4	P07834	779 aa		4.9	□□□□□ -1.63
RPC11	YDR045C	HEM13	P11353	328 aa	Known RBP	4.9	□□□□□ -1.63
RPC11	YDR045C	IDI1	P15496	288 aa		4.9	□□□□□ -1.63
RPC11	YDR045C	SCT1	P32784	759 aa		4.9	□□□□□ -1.63
RPC11	YDR045C	EXO5	P38289	585 aa		4.9	□□□□□ -1.63
RPC11	YDR045C	PAF1	P38351	445 aa		4.9	□□□□□ -1.63
RPC11	YDR045C	AIR1	P40507	360 aa	Known RBP	4.9	□□□□□ -1.63
RPC11	YDR045C	CNN1	P43618	361 aa		4.9	□□□□□ -1.63
RPC11	YDR045C	YJR098C	P47139	656 aa		4.9	□□□□□ -1.63
RPC11	YDR045C	YJR124C	P47159	448 aa		4.9	□□□□□ -1.63
RPC11	YDR045C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	RIP-Chip
RPC11	YDR045C	RAT1	Q02792	1006 aa	Known RBP	4.9	□□□□□ -1.63
RPC11	YDR045C	NYV1	Q12255	253 aa		4.9	□□□□□ -1.63
RPC11	YDR045C	GLO4	Q12320	285 aa		4.9	□□□□□ -1.63
RPC11	YDR045C	YEF3	P16521	1044 aa	Known RBP	4.89	□□□□□ -1.63
RPC11	YDR045C	YBR284W	P38150	797 aa		4.89	□□□□□ -1.63
RPC11	YDR045C	GDH3	P39708	457 aa		4.89	□□□□□ -1.63
RPC11	YDR045C	NEO1	P40527	1151 aa		4.89	□□□□□ -1.63
RPC11	YDR045C	INP51	P40559	946 aa	Known RBP	4.89	□□□□□ -1.63
RPC11	YDR045C	YNR063W	P53749	607 aa		4.89	□□□□□ -1.63
RPC11	YDR045C	UME1	Q03010	460 aa		4.89	□□□□□ -1.63
RPC11	YDR045C	ECM16	Q04217	1267 aa	Known RBP	4.89	□□□□□ -1.63
RPC11	YDR045C	YDR306C	Q06640	478 aa		4.89	□□□□□ -1.63
RPC11	YDR045C	THI73	Q07904	523 aa		4.89	□□□□□ -1.63
RPC11	YDR045C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.88	□□□□□ -1.63
RPC11	YDR045C	HVG1	P0CE11	249 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	TY1A-DR6	P0CX70	440 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	TY1A-ER1	P0CX71	440 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	TY1A-LR2	P0CX72	440 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	TY1A-PL	P0CX73	440 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	TY1A-JR1	P0CX74	440 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	TY1A-LR3	P0CX75	440 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	TY1A-ML2	P0CX76	440 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	DBP5	P20449	482 aa	Known RBP	4.88	□□□□□ -1.63
RPC11	YDR045C	PRP5	P21372	849 aa	Predicted RBP	4.88	□□□□□ -1.63
RPC11	YDR045C	PPH3	P32345	308 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	AAR2	P32357	355 aa	Predicted RBP	4.88	□□□□□ -1.63
RPC11	YDR045C	ADD66	P36040	267 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	RDH54	P38086	958 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	PAN5	P38787	379 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	LSB6	P42951	607 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	DAS1	P47005	663 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	YJR120W	P47157	116 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	HNT2	P49775	206 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	YNL193W	P53870	558 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	TY1A-GR1	Q12085	440 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	YPL066W	Q12194	479 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	TCB1	Q12466	1186 aa		4.88	□□□□□ -1.63
RPC11	YDR045C	TMA7	Q3E764	64 aa	Known RBP	4.88	□□□□□ -1.63
RPC11	YDR045C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.88	□□□□□ -1.63
RPC11	YDR045C	TY1A-OL	Q92392	440 aa	Known RBP	4.88	□□□□□ -1.63
RPC11	YDR045C	HTS1	P07263	546 aa	Known RBP	4.87	□□□□□ -1.63
RPC11	YDR045C	PEX8	P53248	589 aa		4.87	□□□□□ -1.63
RPC11	YDR045C	CEF1	Q03654	590 aa	Predicted RBP	4.87	□□□□□ -1.63
RPC11	YDR045C	VMS1	Q04311	632 aa	Known RBP	4.87	□□□□□ -1.63
RPC11	YDR045C	SLX4	Q12098	748 aa		4.87	□□□□□ -1.63
RPC11	YDR045C	HBN1	Q96VH4	193 aa		4.87	□□□□□ -1.63
RPC11	YDR045C	TOP3	P13099	656 aa		4.86	□□□□□ -1.63
RPC11	YDR045C	MEF1	P25039	761 aa		4.86	□□□□□ -1.63
RPC11	YDR045C	VBA3	P25594	458 aa		4.86	□□□□□ -1.63
RPC11	YDR045C	DOM34	P33309	386 aa		4.86	□□□□□ -1.63
RPC11	YDR045C	NUP85	P46673	744 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms