RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	YDR306C	Q06640	478 aa		3.79	□□□□□ -1.8
PSF1	YDR013W	NBL1	Q3E7Y6	73 aa		3.79	□□□□□ -1.8
PSF1	YDR013W	RRP5	Q05022	1729 aa	Known RBP	3.78	□□□□□ -1.8
PSF1	YDR013W	SSK22	P25390	1331 aa	Predicted RBP	3.78	□□□□□ -1.8
PSF1	YDR013W	COB	P00163	385 aa		3.78	□□□□□ -1.8
PSF1	YDR013W	CYC8	P14922	966 aa		3.78	□□□□□ -1.8
PSF1	YDR013W	RGP1	P16664	663 aa		3.78	□□□□□ -1.8
PSF1	YDR013W	TEC1	P18412	486 aa		3.78	□□□□□ -1.8
PSF1	YDR013W	HCA4	P20448	770 aa	Known RBP	3.78	□□□□□ -1.8
PSF1	YDR013W	UBP1	P25037	809 aa		3.78	□□□□□ -1.8
PSF1	YDR013W	MRPL10	P36520	322 aa		3.78	□□□□□ -1.8
PSF1	YDR013W	RRM3	P38766	723 aa		3.78	□□□□□ -1.8
PSF1	YDR013W	DLD3	P39976	496 aa	Known RBP	3.78	□□□□□ -1.8
PSF1	YDR013W	CWH41	P53008	833 aa		3.78	□□□□□ -1.8
PSF1	YDR013W	YPL034W	Q03083	165 aa		3.78	□□□□□ -1.8
PSF1	YDR013W	HRQ1	Q05549	1077 aa		3.78	□□□□□ -1.8
PSF1	YDR013W	HSP82	P02829	709 aa	Known RBP	3.77	□□□□□ -1.81
PSF1	YDR013W	SAC6	P32599	642 aa	Known RBP	3.77	□□□□□ -1.81
PSF1	YDR013W	AAP1	P37898	856 aa	Known RBP	3.77	□□□□□ -1.81
PSF1	YDR013W	RKM3	P38222	552 aa		3.77	□□□□□ -1.81
PSF1	YDR013W	RFC5	P38251	354 aa		3.77	□□□□□ -1.81
PSF1	YDR013W	YHL017W	P38745	532 aa		3.77	□□□□□ -1.81
PSF1	YDR013W	SSN3	P39073	555 aa		3.77	□□□□□ -1.81
PSF1	YDR013W	OSW7	P43611	510 aa		3.77	□□□□□ -1.81
PSF1	YDR013W	PRY1	P47032	299 aa		3.77	□□□□□ -1.81
PSF1	YDR013W	CTR9	P89105	1077 aa		3.77	□□□□□ -1.81
PSF1	YDR013W	HPC2	Q01448	625 aa		3.77	□□□□□ -1.81
PSF1	YDR013W	PKH3	Q03306	898 aa	Predicted RBP	3.77	□□□□□ -1.81
PSF1	YDR013W	MRD1	Q06106	887 aa	Known RBP	3.77	□□□□□ -1.81
PSF1	YDR013W	ELG1	Q12050	791 aa		3.77	□□□□□ -1.81
PSF1	YDR013W	SSF2	Q12153	453 aa	Predicted RBP	3.77	□□□□□ -1.81
PSF1	YDR013W	SFI1	Q12369	946 aa		3.77	□□□□□ -1.81
PSF1	YDR013W	PGA3	Q12746	312 aa	Known RBP	3.77	□□□□□ -1.81
PSF1	YDR013W	TRS33	Q99394	268 aa		3.77	□□□□□ -1.81
PSF1	YDR013W	HXK1	P04806	485 aa	Known RBP	3.76	□□□□□ -1.81
PSF1	YDR013W	PIF1	P07271	859 aa		3.76	□□□□□ -1.81
PSF1	YDR013W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
PSF1	YDR013W	ARG8	P18544	423 aa		3.76	□□□□□ -1.81
PSF1	YDR013W	DMA1	P38823	416 aa		3.76	□□□□□ -1.81
PSF1	YDR013W	YMR147W	P40218	223 aa	Known RBP	3.76	□□□□□ -1.81
PSF1	YDR013W	TFG2	P41896	400 aa	Predicted RBP	3.76	□□□□□ -1.81
PSF1	YDR013W	MSN5	P52918	1224 aa		3.76	□□□□□ -1.81
PSF1	YDR013W	MRPS35	P53292	345 aa		3.76	□□□□□ -1.81
PSF1	YDR013W	FCP1	Q03254	732 aa		3.76	□□□□□ -1.81
PSF1	YDR013W	VPS60	Q03390	229 aa		3.76	□□□□□ -1.81
PSF1	YDR013W	HCR1	Q05775	265 aa	Known RBP	3.76	□□□□□ -1.81
PSF1	YDR013W	URB1	P34241	1764 aa	Known RBP	3.76	□□□□□ -1.81
PSF1	YDR013W	CPA2	P03965	1118 aa	Known RBP	3.75	□□□□□ -1.81
PSF1	YDR013W	TRL1	P09880	827 aa	Known RBP	3.75	□□□□□ -1.81
PSF1	YDR013W	OPI1	P21957	404 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	PEP3	P27801	918 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	KNS1	P32350	737 aa	Predicted RBP	3.75	□□□□□ -1.81
PSF1	YDR013W	SPC110	P32380	944 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	NGR1	P32831	672 aa	Known RBP	3.75	□□□□□ -1.81
PSF1	YDR013W	YKT6	P36015	200 aa	Known RBP	3.75	□□□□□ -1.81
PSF1	YDR013W	MET1	P36150	593 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	TCD1	P38756	429 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	SPT8	P38915	602 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	HYR1	P40581	163 aa	Known RBP	3.75	□□□□□ -1.81
PSF1	YDR013W	CIR1	P42940	261 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	IRC8	P47046	822 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	YNL193W	P53870	558 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	TIM50	Q02776	476 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	HOS3	Q02959	697 aa	Known RBP	3.75	□□□□□ -1.81
PSF1	YDR013W	EST2	Q06163	884 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	IRC3	Q06683	689 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	ATG20	Q07528	640 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	BUG1	Q12191	341 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	HAT1	Q12341	374 aa		3.75	□□□□□ -1.81
PSF1	YDR013W	SEC18	P18759	758 aa	Known RBP	3.74	□□□□□ -1.81
PSF1	YDR013W	RDS1	P25611	832 aa		3.74	□□□□□ -1.81
PSF1	YDR013W	SPB4	P25808	606 aa	Predicted RBP	3.74	□□□□□ -1.81
PSF1	YDR013W	MCM2	P29469	868 aa		3.74	□□□□□ -1.81
PSF1	YDR013W	MDL2	P33311	773 aa		3.74	□□□□□ -1.81
PSF1	YDR013W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
PSF1	YDR013W	MNR2	P35724	969 aa		3.74	□□□□□ -1.81
PSF1	YDR013W	SAP190	P36123	1033 aa		3.74	□□□□□ -1.81
PSF1	YDR013W	OMA1	P36163	345 aa		3.74	□□□□□ -1.81
PSF1	YDR013W	NPR3	P38742	1146 aa		3.74	□□□□□ -1.81
PSF1	YDR013W	CAJ1	P39101	391 aa		3.74	□□□□□ -1.81
PSF1	YDR013W	YER130C	P39959	443 aa		3.74	□□□□□ -1.81
PSF1	YDR013W	EPL1	P43572	832 aa		3.74	□□□□□ -1.81
PSF1	YDR013W	INP52	P50942	1183 aa		3.74	□□□□□ -1.81
PSF1	YDR013W	NAF1	P53919	492 aa	Known RBP	3.74	□□□□□ -1.81
PSF1	YDR013W	UFD2	P54860	961 aa		3.74	□□□□□ -1.81
PSF1	YDR013W	RAT1	Q02792	1006 aa	Known RBP	3.74	□□□□□ -1.81
PSF1	YDR013W	SPN1	Q06505	410 aa	Predicted RBP	3.74	□□□□□ -1.81
PSF1	YDR013W	CTI6	Q08923	506 aa		3.74	□□□□□ -1.81
PSF1	YDR013W	PGI1	P12709	554 aa	Known RBP	3.73	□□□□□ -1.81
PSF1	YDR013W	FPS1	P23900	669 aa		3.73	□□□□□ -1.81
PSF1	YDR013W	MSH3	P25336	1018 aa		3.73	□□□□□ -1.81
PSF1	YDR013W	RPN1	P38764	993 aa	Known RBP	3.73	□□□□□ -1.81
PSF1	YDR013W	ALG2	P43636	503 aa		3.73	□□□□□ -1.81
PSF1	YDR013W	STU2	P46675	888 aa		3.73	□□□□□ -1.81
PSF1	YDR013W	FYV8	P46949	817 aa	Known RBP	3.73	□□□□□ -1.81
PSF1	YDR013W	SEN54	Q02825	467 aa	Predicted RBP	3.73	□□□□□ -1.81
PSF1	YDR013W	RPN7	Q06103	429 aa	Known RBP	3.73	□□□□□ -1.81
PSF1	YDR013W	YCG1	Q06680	1035 aa		3.73	□□□□□ -1.81
PSF1	YDR013W	DIB1	Q06819	143 aa	Predicted RBP	3.73	□□□□□ -1.81
PSF1	YDR013W	TAH18	Q12181	623 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms